RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 ABCC6O95255 1503 aa11.4□□□□□ -0.58
PROM1-215ENST00000513448 ADAMTS7Q9UKP4 1686 aa11.4□□□□□ -0.58
PROM1-215ENST00000513448 TUBGCP6Q96RT7 1819 aa11.4□□□□□ -0.58
PROM1-215ENST00000513448 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.59
PROM1-215ENST00000513448 GOLGA6L3A6NEY3 463 aa11.4□□□□□ -0.59
PROM1-215ENST00000513448 PPP1R42Q7Z4L9 355 aa11.4□□□□□ -0.59
PROM1-215ENST00000513448 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.59
PROM1-215ENST00000513448 LRRC59Q96AG4 307 aaKnown RBP11.4□□□□□ -0.59
PROM1-215ENST00000513448 ESYT1Q9BSJ8 1104 aa11.4□□□□□ -0.59
PROM1-215ENST00000513448 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
PROM1-215ENST00000513448 GIGYF1O75420 1035 aaPredicted RBP11.39□□□□□ -0.59
PROM1-215ENST00000513448 MPRIPQ6WCQ1 1025 aa11.39□□□□□ -0.59
PROM1-215ENST00000513448 HYPKQ9NX55 129 aa11.39□□□□□ -0.59
PROM1-215ENST00000513448 ERBB3P21860 1342 aa11.38□□□□□ -0.59
PROM1-215ENST00000513448 CHMLP26374 656 aa11.38□□□□□ -0.59
PROM1-215ENST00000513448 KSR2Q6VAB6 950 aa11.38□□□□□ -0.59
PROM1-215ENST00000513448 SRGAP3O43295 1099 aa11.38□□□□□ -0.59
PROM1-215ENST00000513448 SURF6O75683 361 aaKnown RBP11.38□□□□□ -0.59
PROM1-215ENST00000513448 RHPN1Q8TCX5 695 aa11.38□□□□□ -0.59
PROM1-215ENST00000513448 ALS2Q96Q42 1657 aa11.37□□□□□ -0.59
PROM1-215ENST00000513448 TTC41PQ6P2S7 1318 aa11.37□□□□□ -0.59
PROM1-215ENST00000513448 USP42Q9H9J4 1324 aaKnown RBP11.37□□□□□ -0.59
PROM1-215ENST00000513448 ZBTB7CA1YPR0 619 aa11.37□□□□□ -0.59
PROM1-215ENST00000513448 DDX58O95786 925 aaKnown RBP11.37□□□□□ -0.59
PROM1-215ENST00000513448 ADCY9O60503 1353 aa11.37□□□□□ -0.59
PROM1-215ENST00000513448 SIPA1L3O60292 1781 aaPredicted RBP11.37□□□□□ -0.59
PROM1-215ENST00000513448 TRIM6-TRIM34B2RNG4 842 aa11.36□□□□□ -0.59
PROM1-215ENST00000513448 NBPF7P0C2Y1 421 aaPredicted RBP11.36□□□□□ -0.59
PROM1-215ENST00000513448 MRE11P49959 708 aa11.36□□□□□ -0.59
PROM1-215ENST00000513448 ERC1Q8IUD2 1116 aa11.36□□□□□ -0.59
PROM1-215ENST00000513448 PXDNQ92626 1479 aa11.36□□□□□ -0.59
PROM1-215ENST00000513448 KCNQ3O43525 872 aa11.36□□□□□ -0.59
PROM1-215ENST00000513448 CYP2E1P05181 493 aaPredicted RBP11.36□□□□□ -0.59
PROM1-215ENST00000513448 ATF3P18847 181 aa11.36□□□□□ -0.59
PROM1-215ENST00000513448 LMOD2Q6P5Q4 547 aa11.36□□□□□ -0.59
PROM1-215ENST00000513448 RAPGEF4Q8WZA2 1011 aa11.36□□□□□ -0.59
PROM1-215ENST00000513448 DDX21Q9NR30 783 aaKnown RBP eCLIP11.36□□□□□ -0.59
PROM1-215ENST00000513448 BRPF3Q9ULD4 1205 aa11.36□□□□□ -0.59
PROM1-215ENST00000513448 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
PROM1-215ENST00000513448 UTYO14607 1347 aa11.35□□□□□ -0.59
PROM1-215ENST00000513448 LINS1Q8NG48 757 aa11.35□□□□□ -0.59
PROM1-215ENST00000513448 RILPL2Q969X0 211 aa11.35□□□□□ -0.59
PROM1-215ENST00000513448 INTS4Q96HW7 963 aaKnown RBP11.35□□□□□ -0.59
PROM1-215ENST00000513448 SPG7Q9UQ90 795 aa11.35□□□□□ -0.59
PROM1-215ENST00000513448 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
PROM1-215ENST00000513448 C9orf78Q9NZ63 289 aaPredicted RBP11.35□□□□□ -0.59
PROM1-215ENST00000513448 GLRX3O76003 335 aaKnown RBP11.34□□□□□ -0.59
PROM1-215ENST00000513448 BAG4O95429 457 aaKnown RBP11.34□□□□□ -0.59
PROM1-215ENST00000513448 TATP17735 454 aaPredicted RBP11.34□□□□□ -0.59
PROM1-215ENST00000513448 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
PROM1-215ENST00000513448 KLHL40Q2TBA0 621 aa11.34□□□□□ -0.59
PROM1-215ENST00000513448 CADPS2Q86UW7 1296 aa11.34□□□□□ -0.59
PROM1-215ENST00000513448 PI4K2BQ8TCG2 481 aa11.34□□□□□ -0.59
PROM1-215ENST00000513448 MAP3K2Q9Y2U5 619 aa11.34□□□□□ -0.59
PROM1-215ENST00000513448 NPHP3Q7Z494 1330 aa11.34□□□□□ -0.59
PROM1-215ENST00000513448 SSFA2P28290 1259 aa11.33□□□□□ -0.6
PROM1-215ENST00000513448 NEK4P51957 841 aa11.33□□□□□ -0.6
PROM1-215ENST00000513448 ZNF790Q6PG37 636 aa11.33□□□□□ -0.6
PROM1-215ENST00000513448 CLASRPQ8N2M8 674 aaKnown RBP11.33□□□□□ -0.6
PROM1-215ENST00000513448 SLC52A2Q9HAB3 445 aa11.33□□□□□ -0.6
PROM1-215ENST00000513448 ANO2Q9NQ90 1003 aa11.33□□□□□ -0.6
PROM1-215ENST00000513448 XRCC6P12956 609 aaKnown RBP eCLIP11.33□□□□□ -0.6
PROM1-215ENST00000513448 CUL4AQ13619 759 aa11.33□□□□□ -0.6
PROM1-215ENST00000513448 IFNL2Q8IZJ0 200 aa11.33□□□□□ -0.6
PROM1-215ENST00000513448 FAM43AQ8N2R8 423 aa11.33□□□□□ -0.6
PROM1-215ENST00000513448 GPATCH3Q96I76 525 aa11.33□□□□□ -0.6
PROM1-215ENST00000513448 IL1RAPL2Q9NP60 686 aa11.33□□□□□ -0.6
PROM1-215ENST00000513448 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
PROM1-215ENST00000513448 HSPA4P34932 840 aa11.32□□□□□ -0.6
PROM1-215ENST00000513448 TSHZ3Q63HK5 1081 aa11.32□□□□□ -0.6
PROM1-215ENST00000513448 LARP1Q6PKG0 1096 aaKnown RBP11.32□□□□□ -0.6
PROM1-215ENST00000513448 GZF1Q9H116 711 aaPredicted RBP11.32□□□□□ -0.6
PROM1-215ENST00000513448 SCN11AQ9UI33 1791 aa11.32□□□□□ -0.6
PROM1-215ENST00000513448 GRM8O00222 908 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 SGSM2O43147 1006 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 PHKG2P15735 406 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 RUFY2Q8WXA3 655 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 TMX3Q96JJ7 454 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 CPDO75976 1380 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 TMEM94Q12767 1356 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 OS9Q13438 667 aaPredicted RBP11.31□□□□□ -0.6
PROM1-215ENST00000513448 UNC5CLQ8IV45 518 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 DCAF5Q96JK2 942 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 COL18A1P39060 1754 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 RAD50Q92878 1312 aa11.31□□□□□ -0.6
PROM1-215ENST00000513448 MRC1P22897 1456 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 CRYBG1Q9Y4K1 1723 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 RGPD5Q99666 1765 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 ZC3H6P61129 1189 aaKnown RBP11.3□□□□□ -0.6
PROM1-215ENST00000513448 NEXNQ0ZGT2 675 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 PDIA6Q15084 440 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 GRPEL1Q9HAV7 217 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 ECHDC1Q9NTX5 307 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 NLRP2Q9NX02 1062 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 TNS3Q68CZ2 1445 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 AK9Q5TCS8 1911 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 HIP1O00291 1037 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 ANXA1P04083 346 aa11.3□□□□□ -0.6
PROM1-215ENST00000513448 PROSER3Q2NL68 480 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms