RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 PLA2G4AP47712 749 aa8.92□□□□□ -0.98
CHD1-210ENST00000513064 VEGFBP49765 207 aa8.92□□□□□ -0.98
CHD1-210ENST00000513064 PSMA6P60900 246 aaKnown RBP8.92□□□□□ -0.98
CHD1-210ENST00000513064 NFX1Q12986 1120 aaKnown RBP8.92□□□□□ -0.98
CHD1-210ENST00000513064 TMEM164Q5U3C3 297 aa8.92□□□□□ -0.98
CHD1-210ENST00000513064 STAG2Q8N3U4 1231 aa8.92□□□□□ -0.98
CHD1-210ENST00000513064 ZDHHC1Q8WTX9 485 aa8.92□□□□□ -0.98
CHD1-210ENST00000513064 L3MBTL2Q969R5 705 aa8.92□□□□□ -0.98
CHD1-210ENST00000513064 WEE1P30291 646 aa8.91□□□□□ -0.98
CHD1-210ENST00000513064 C1orf216Q8TAB5 229 aa8.91□□□□□ -0.98
CHD1-210ENST00000513064 NANOS1Q8WY41 292 aaKnown RBP8.91□□□□□ -0.98
CHD1-210ENST00000513064 SERTM1A2A2V5 107 aa8.9□□□□□ -0.98
CHD1-210ENST00000513064 EML1O00423 815 aa8.9□□□□□ -0.98
CHD1-210ENST00000513064 PPP1R12BO60237 982 aaPredicted RBP8.9□□□□□ -0.98
CHD1-210ENST00000513064 IGFBP4P22692 258 aa8.9□□□□□ -0.98
CHD1-210ENST00000513064 MSX1P28360 303 aa8.9□□□□□ -0.98
CHD1-210ENST00000513064 HIRAP54198 1017 aaPredicted RBP8.9□□□□□ -0.98
CHD1-210ENST00000513064 SLC16A10Q8TF71 515 aa8.9□□□□□ -0.98
CHD1-210ENST00000513064 SCG3Q8WXD2 468 aaKnown RBP8.9□□□□□ -0.98
CHD1-210ENST00000513064 GAS2L1Q99501 681 aaPredicted RBP8.9□□□□□ -0.98
CHD1-210ENST00000513064 CUEDC1Q9NWM3 386 aaPredicted RBP8.9□□□□□ -0.98
CHD1-210ENST00000513064 ZDHHC3Q9NYG2 299 aa8.9□□□□□ -0.98
CHD1-210ENST00000513064 PARP3Q9Y6F1 533 aa8.9□□□□□ -0.98
CHD1-210ENST00000513064 LGR5O75473 907 aa8.89□□□□□ -0.99
CHD1-210ENST00000513064 VSIG8P0DPA2 414 aa8.89□□□□□ -0.99
CHD1-210ENST00000513064 NBPF1Q3BBV0 1214 aa8.89□□□□□ -0.99
CHD1-210ENST00000513064 LCE2AQ5TA79 106 aaPredicted RBP8.89□□□□□ -0.99
CHD1-210ENST00000513064 TREML4Q6UXN2 200 aa8.89□□□□□ -0.99
CHD1-210ENST00000513064 TRIM22Q8IYM9 498 aa8.89□□□□□ -0.99
CHD1-210ENST00000513064 AIDAQ96BJ3 306 aa8.89□□□□□ -0.99
CHD1-210ENST00000513064 GMCL1Q96IK5 515 aa8.89□□□□□ -0.99
CHD1-210ENST00000513064 C2orf49Q9BVC5 232 aaPredicted RBP8.89□□□□□ -0.99
CHD1-210ENST00000513064 ATP4AP20648 1035 aa8.88□□□□□ -0.99
CHD1-210ENST00000513064 OCLNQ16625 522 aa8.88□□□□□ -0.99
CHD1-210ENST00000513064 DBN1Q16643 649 aa8.88□□□□□ -0.99
CHD1-210ENST00000513064 RIPOR1Q6ZS17 1223 aa8.88□□□□□ -0.99
CHD1-210ENST00000513064 CLP1Q92989 425 aaKnown RBP8.88□□□□□ -0.99
CHD1-210ENST00000513064 ZNF232Q9UNY5 417 aa8.88□□□□□ -0.99
CHD1-210ENST00000513064 H7C1W4 665 aa8.87□□□□□ -0.99
CHD1-210ENST00000513064 WFS1O76024 890 aa8.87□□□□□ -0.99
CHD1-210ENST00000513064 SH3PXD2AQ5TCZ1 1133 aa8.87□□□□□ -0.99
CHD1-210ENST00000513064 VWA5B2Q8N398 1253 aa8.87□□□□□ -0.99
CHD1-210ENST00000513064 C7orf43Q8WVR3 580 aa8.87□□□□□ -0.99
CHD1-210ENST00000513064 IRF7Q92985 503 aa8.87□□□□□ -0.99
CHD1-210ENST00000513064 CRISPLD1Q9H336 500 aa8.87□□□□□ -0.99
CHD1-210ENST00000513064 GPAMQ9HCL2 828 aa8.87□□□□□ -0.99
CHD1-210ENST00000513064 CHMP3Q9Y3E7 222 aa8.87□□□□□ -0.99
CHD1-210ENST00000513064 ERBB4Q15303 1308 aa8.86□□□□□ -0.99
CHD1-210ENST00000513064 TMEM88BA6NKF7 163 aa8.86□□□□□ -0.99
CHD1-210ENST00000513064 CSB-PGBD3P0DP91 1061 aa8.86□□□□□ -0.99
CHD1-210ENST00000513064 TATP17735 454 aaPredicted RBP8.86□□□□□ -0.99
CHD1-210ENST00000513064 TXLNAP40222 546 aa8.86□□□□□ -0.99
CHD1-210ENST00000513064 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
CHD1-210ENST00000513064 C1orf53Q5VUE5 145 aa8.86□□□□□ -0.99
CHD1-210ENST00000513064 FOXO3O43524 673 aa8.85□□□□□ -0.99
CHD1-210ENST00000513064 LBRQ14739 615 aaKnown RBP8.85□□□□□ -0.99
CHD1-210ENST00000513064 SV2AQ7L0J3 742 aa8.85□□□□□ -0.99
CHD1-210ENST00000513064 CHMP7Q8WUX9 453 aaPredicted RBP8.85□□□□□ -0.99
CHD1-210ENST00000513064 ZNF837Q96EG3 531 aaPredicted RBP8.85□□□□□ -0.99
CHD1-210ENST00000513064 PRIMPOLQ96LW4 560 aa8.85□□□□□ -0.99
CHD1-210ENST00000513064 RUBCNLQ9H714 662 aa8.85□□□□□ -0.99
CHD1-210ENST00000513064 SLAIN2Q9P270 581 aa8.85□□□□□ -0.99
CHD1-210ENST00000513064 PRMT3O60678 531 aa8.84□□□□□ -0.99
CHD1-210ENST00000513064 THBS1P07996 1170 aa8.84□□□□□ -0.99
CHD1-210ENST00000513064 PGBD3Q8N328 593 aa8.84□□□□□ -0.99
CHD1-210ENST00000513064 NUCKS1Q9H1E3 243 aaKnown RBP8.84□□□□□ -0.99
CHD1-210ENST00000513064 HCN4Q9Y3Q4 1203 aa8.84□□□□□ -0.99
CHD1-210ENST00000513064 CDC14CA4D256 554 aa8.83□□□□□ -1
CHD1-210ENST00000513064 ARSJQ5FYB0 599 aaPredicted RBP8.83□□□□□ -1
CHD1-210ENST00000513064 EFHC2Q5JST6 749 aa8.83□□□□□ -1
CHD1-210ENST00000513064 GPR161Q8N6U8 529 aaKnown RBP8.83□□□□□ -1
CHD1-210ENST00000513064 ZIC5Q96T25 663 aa8.83□□□□□ -1
CHD1-210ENST00000513064 USTQ9Y2C2 406 aa8.83□□□□□ -1
CHD1-210ENST00000513064 GPC6Q9Y625 555 aaPredicted RBP8.83□□□□□ -1
CHD1-210ENST00000513064 A0A1W2PNR3 127 aa8.82□□□□□ -1
CHD1-210ENST00000513064 FKBP5Q13451 457 aaPredicted RBP8.82□□□□□ -1
CHD1-210ENST00000513064 UBAP2LQ14157 1087 aaKnown RBP8.82□□□□□ -1
CHD1-210ENST00000513064 NLRP8Q86W28 1048 aa8.82□□□□□ -1
CHD1-210ENST00000513064 ALDH16A1Q8IZ83 802 aa8.82□□□□□ -1
CHD1-210ENST00000513064 PHACTR1Q9C0D0 580 aa8.82□□□□□ -1
CHD1-210ENST00000513064 CXXC1Q9P0U4 656 aaPredicted RBP8.82□□□□□ -1
CHD1-210ENST00000513064 GTPBP3Q969Y2 492 aaKnown RBP8.81□□□□□ -1
CHD1-210ENST00000513064 ATP2B4P23634 1241 aa8.8□□□□□ -1
CHD1-210ENST00000513064 FOXR1Q6PIV2 292 aa8.8□□□□□ -1
CHD1-210ENST00000513064 BICDL1Q6ZP65 573 aa8.8□□□□□ -1
CHD1-210ENST00000513064 RTN1Q16799 776 aa8.79□□□□□ -1
CHD1-210ENST00000513064 FIGNL1Q6PIW4 674 aa8.79□□□□□ -1
CHD1-210ENST00000513064 RETREG2Q8NC44 543 aa8.79□□□□□ -1
CHD1-210ENST00000513064 COL26A1Q96A83 441 aa8.79□□□□□ -1
CHD1-210ENST00000513064 VTI1AQ96AJ9 217 aa8.79□□□□□ -1
CHD1-210ENST00000513064 KLRG1Q96E93 195 aa8.79□□□□□ -1
CHD1-210ENST00000513064 ZCCHC2Q9C0B9 1178 aaKnown RBP8.79□□□□□ -1
CHD1-210ENST00000513064 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.79□□□□□ -1
CHD1-210ENST00000513064 CARNS1A5YM72 827 aa8.78□□□□□ -1
CHD1-210ENST00000513064 SSFA2P28290 1259 aa8.78□□□□□ -1
CHD1-210ENST00000513064 GMPRP36959 345 aa8.78□□□□□ -1
CHD1-210ENST00000513064 RHPN1Q8TCX5 695 aa8.78□□□□□ -1
CHD1-210ENST00000513064 CFHR5Q9BXR6 569 aa8.78□□□□□ -1
CHD1-210ENST00000513064 SAMD5Q5TGI4 173 aa8.77□□□□□ -1.01
CHD1-210ENST00000513064 MYO19Q96H55 970 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms