RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 VIRMAQ69YN4 1812 aaKnown RBP20.55■□□□□ 0.88
SGCA-208ENST00000512526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.55■□□□□ 0.88
SGCA-208ENST00000512526 UBR2Q8IWV8 1755 aa20.54■□□□□ 0.88
SGCA-208ENST00000512526 C4BP0C0L5 1744 aa20.54■□□□□ 0.88
SGCA-208ENST00000512526 A1BGP04217 495 aa20.54■□□□□ 0.88
SGCA-208ENST00000512526 ZBTB1Q9Y2K1 713 aa20.54■□□□□ 0.88
SGCA-208ENST00000512526 KRT24Q2M2I5 525 aa20.53■□□□□ 0.88
SGCA-208ENST00000512526 TRAPPC3LQ5T215 181 aa20.53■□□□□ 0.88
SGCA-208ENST00000512526 ARHGEF1Q92888 912 aaKnown RBP20.53■□□□□ 0.88
SGCA-208ENST00000512526 C5P01031 1676 aa20.53■□□□□ 0.88
SGCA-208ENST00000512526 CICQ96RK0 1608 aaPredicted RBP20.53■□□□□ 0.88
SGCA-208ENST00000512526 PHF14O94880 888 aa20.52■□□□□ 0.88
SGCA-208ENST00000512526 ADRA2BP18089 450 aa20.52■□□□□ 0.88
SGCA-208ENST00000512526 SLC16A10Q8TF71 515 aa20.52■□□□□ 0.88
SGCA-208ENST00000512526 SPINK5Q9NQ38 1064 aaPredicted RBP20.52■□□□□ 0.88
SGCA-208ENST00000512526 SOS1Q07889 1333 aaPredicted RBP20.52■□□□□ 0.87
SGCA-208ENST00000512526 TJP1Q07157 1748 aa20.51■□□□□ 0.87
SGCA-208ENST00000512526 CANXP27824 592 aaKnown RBP20.51■□□□□ 0.87
SGCA-208ENST00000512526 EIF5P55010 431 aaKnown RBP20.51■□□□□ 0.87
SGCA-208ENST00000512526 TAF1LQ8IZX4 1826 aa20.5■□□□□ 0.87
SGCA-208ENST00000512526 KDM3BQ7LBC6 1761 aa20.49■□□□□ 0.87
SGCA-208ENST00000512526 NBPF26B4DH59 902 aa20.49■□□□□ 0.87
SGCA-208ENST00000512526 ZBTB7AO95365 584 aa20.49■□□□□ 0.87
SGCA-208ENST00000512526 NBPF10Q6P3W6 841 aaKnown RBP20.49■□□□□ 0.87
SGCA-208ENST00000512526 NBPF15Q8N660 670 aa20.49■□□□□ 0.87
SGCA-208ENST00000512526 TSR2Q969E8 191 aaKnown RBP20.49■□□□□ 0.87
SGCA-208ENST00000512526 MTFR1LQ9H019 292 aa20.49■□□□□ 0.87
SGCA-208ENST00000512526 MSH5O43196 834 aa20.48■□□□□ 0.87
SGCA-208ENST00000512526 HOXB7P09629 217 aa20.48■□□□□ 0.87
SGCA-208ENST00000512526 IL6STP40189 918 aaPredicted RBP20.48■□□□□ 0.87
SGCA-208ENST00000512526 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
SGCA-208ENST00000512526 C8orf58Q8NAV2 365 aa20.48■□□□□ 0.87
SGCA-208ENST00000512526 COL5A3P25940 1745 aaPredicted RBP20.47■□□□□ 0.87
SGCA-208ENST00000512526 ATF5Q9Y2D1 282 aaPredicted RBP20.47■□□□□ 0.87
SGCA-208ENST00000512526 RFC4P35249 363 aa20.46■□□□□ 0.87
SGCA-208ENST00000512526 PIP4K2AP48426 406 aaPredicted RBP20.46■□□□□ 0.87
SGCA-208ENST00000512526 SPON1Q9HCB6 807 aa20.46■□□□□ 0.87
SGCA-208ENST00000512526 EIF2S2P20042 333 aaKnown RBP20.45■□□□□ 0.86
SGCA-208ENST00000512526 PTGER2P43116 358 aa20.45■□□□□ 0.86
SGCA-208ENST00000512526 GOLGA2Q08379 1002 aa20.45■□□□□ 0.86
SGCA-208ENST00000512526 PDIA6Q15084 440 aa20.45■□□□□ 0.86
SGCA-208ENST00000512526 TSPYL6Q8N831 410 aa20.45■□□□□ 0.86
SGCA-208ENST00000512526 SGIP1Q9BQI5 828 aa20.45■□□□□ 0.86
SGCA-208ENST00000512526 FANCIQ9NVI1 1328 aa20.45■□□□□ 0.86
SGCA-208ENST00000512526 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
SGCA-208ENST00000512526 ELL2O00472 640 aaPredicted RBP20.44■□□□□ 0.86
SGCA-208ENST00000512526 ERBB4Q15303 1308 aa20.44■□□□□ 0.86
SGCA-208ENST00000512526 CASZ1Q86V15 1759 aa20.44■□□□□ 0.86
SGCA-208ENST00000512526 A0A087WZG4 1122 aa20.43■□□□□ 0.86
SGCA-208ENST00000512526 GYS1P13807 737 aa20.43■□□□□ 0.86
SGCA-208ENST00000512526 SLFN5Q08AF3 891 aa20.43■□□□□ 0.86
SGCA-208ENST00000512526 LRP10Q7Z4F1 713 aa20.43■□□□□ 0.86
SGCA-208ENST00000512526 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
SGCA-208ENST00000512526 SRP68Q9UHB9 627 aaKnown RBP20.43■□□□□ 0.86
SGCA-208ENST00000512526 NARFQ9UHQ1 456 aa20.43■□□□□ 0.86
SGCA-208ENST00000512526 USP42Q9H9J4 1324 aaKnown RBP20.43■□□□□ 0.86
SGCA-208ENST00000512526 COL15A1P39059 1388 aa20.43■□□□□ 0.86
SGCA-208ENST00000512526 E9PSI1 815 aa20.42■□□□□ 0.86
SGCA-208ENST00000512526 TRMT2AQ8IZ69 625 aaKnown RBP20.42■□□□□ 0.86
SGCA-208ENST00000512526 QSER1Q2KHR3 1735 aa20.41■□□□□ 0.86
SGCA-208ENST00000512526 UBR3Q6ZT12 1888 aa20.41■□□□□ 0.86
SGCA-208ENST00000512526 HNRNPUQ00839 825 aaKnown RBP eCLIP20.41■□□□□ 0.86
SGCA-208ENST00000512526 HDGFL1Q5TGJ6 251 aa20.41■□□□□ 0.86
SGCA-208ENST00000512526 NECTIN2Q92692 538 aa20.41■□□□□ 0.86
SGCA-208ENST00000512526 CDCA7LQ96GN5 454 aa20.41■□□□□ 0.86
SGCA-208ENST00000512526 BCL2L12Q9HB09 334 aa20.41■□□□□ 0.86
SGCA-208ENST00000512526 ZPR1O75312 459 aa20.4■□□□□ 0.86
SGCA-208ENST00000512526 EXOSC9Q06265 439 aaKnown RBP20.4■□□□□ 0.86
SGCA-208ENST00000512526 PROSER3Q2NL68 480 aa20.4■□□□□ 0.86
SGCA-208ENST00000512526 USPL1Q5W0Q7 1092 aa20.4■□□□□ 0.86
SGCA-208ENST00000512526 MSL1Q68DK7 614 aa20.4■□□□□ 0.86
SGCA-208ENST00000512526 NLGN1Q8N2Q7 840 aa20.4■□□□□ 0.86
SGCA-208ENST00000512526 DDX21Q9NR30 783 aaKnown RBP eCLIP20.4■□□□□ 0.86
SGCA-208ENST00000512526 TBC1D2BQ9UPU7 963 aa20.4■□□□□ 0.86
SGCA-208ENST00000512526 ZNF330Q9Y3S2 320 aaPredicted RBP20.4■□□□□ 0.86
SGCA-208ENST00000512526 TUBGCP6Q96RT7 1819 aa20.39■□□□□ 0.86
SGCA-208ENST00000512526 LRP5O75197 1615 aa20.39■□□□□ 0.86
SGCA-208ENST00000512526 CAMTA2O94983 1202 aa20.39■□□□□ 0.85
SGCA-208ENST00000512526 MYL6BP14649 208 aa20.39■□□□□ 0.85
SGCA-208ENST00000512526 FKBP8Q14318 412 aa20.39■□□□□ 0.85
SGCA-208ENST00000512526 TWISTNBQ3B726 338 aaPredicted RBP20.39■□□□□ 0.85
SGCA-208ENST00000512526 VAMP4O75379 141 aa20.38■□□□□ 0.85
SGCA-208ENST00000512526 ANXA1P04083 346 aa20.38■□□□□ 0.85
SGCA-208ENST00000512526 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
SGCA-208ENST00000512526 DZIP3Q86Y13 1208 aaKnown RBP20.38■□□□□ 0.85
SGCA-208ENST00000512526 CHPF2Q9P2E5 772 aa20.38■□□□□ 0.85
SGCA-208ENST00000512526 CHMP4AQ9BY43 222 aa20.37■□□□□ 0.85
SGCA-208ENST00000512526 DBF4Q9UBU7 674 aaPredicted RBP20.37■□□□□ 0.85
SGCA-208ENST00000512526 TM4SF1P30408 202 aa20.36■□□□□ 0.85
SGCA-208ENST00000512526 CCDC30Q5VVM6 783 aa20.36■□□□□ 0.85
SGCA-208ENST00000512526 TTLL7Q6ZT98 887 aa20.36■□□□□ 0.85
SGCA-208ENST00000512526 ARXQ96QS3 562 aa20.36■□□□□ 0.85
SGCA-208ENST00000512526 RGL2O15211 777 aa20.35■□□□□ 0.85
SGCA-208ENST00000512526 POLD1P28340 1107 aa20.35■□□□□ 0.85
SGCA-208ENST00000512526 ERVV-1B6SEH8 477 aa20.34■□□□□ 0.85
SGCA-208ENST00000512526 CLEC4GQ6UXB4 293 aa20.34■□□□□ 0.85
SGCA-208ENST00000512526 COPS6Q7L5N1 327 aa20.34■□□□□ 0.85
SGCA-208ENST00000512526 HYPKQ9NX55 129 aa20.34■□□□□ 0.85
SGCA-208ENST00000512526 MMP10P09238 476 aa20.33■□□□□ 0.85
SGCA-208ENST00000512526 XAGE3Q8WTP9 111 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms