RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 AMOTQ4VCS5 1084 aa16.66■□□□□ 0.26
DEPDC1B-206ENST00000512452 TSPYL6Q8N831 410 aa16.66■□□□□ 0.26
DEPDC1B-206ENST00000512452 API5Q9BZZ5 524 aaKnown RBP16.66■□□□□ 0.26
DEPDC1B-206ENST00000512452 MARCH10Q8NA82 808 aaPredicted RBP16.65■□□□□ 0.26
DEPDC1B-206ENST00000512452 LTV1Q96GA3 475 aaPredicted RBP16.65■□□□□ 0.26
DEPDC1B-206ENST00000512452 RWDD1Q9H446 243 aaPredicted RBP16.65■□□□□ 0.26
DEPDC1B-206ENST00000512452 BCL9O00512 1426 aa16.64■□□□□ 0.25
DEPDC1B-206ENST00000512452 NBPF6Q5VWK0 638 aa16.64■□□□□ 0.25
DEPDC1B-206ENST00000512452 C16orf71Q8IYS4 520 aaPredicted RBP16.64■□□□□ 0.25
DEPDC1B-206ENST00000512452 NBPF4Q96M43 638 aa16.64■□□□□ 0.25
DEPDC1B-206ENST00000512452 NMRK2Q9NPI5 230 aa16.64■□□□□ 0.25
DEPDC1B-206ENST00000512452 TNNQ9UQP3 1299 aa16.64■□□□□ 0.25
DEPDC1B-206ENST00000512452 LMO7Q8WWI1 1683 aa16.64■□□□□ 0.25
DEPDC1B-206ENST00000512452 ABCC4O15439 1325 aa16.64■□□□□ 0.25
DEPDC1B-206ENST00000512452 CPDO75976 1380 aa16.64■□□□□ 0.25
DEPDC1B-206ENST00000512452 PLEKHO1Q53GL0 409 aaPredicted RBP16.63■□□□□ 0.25
DEPDC1B-206ENST00000512452 ANKRD24Q8TF21 1146 aa16.63■□□□□ 0.25
DEPDC1B-206ENST00000512452 TSPYL4Q9UJ04 414 aa16.63■□□□□ 0.25
DEPDC1B-206ENST00000512452 CEMIPQ8WUJ3 1361 aa16.63■□□□□ 0.25
DEPDC1B-206ENST00000512452 FAM208AQ9UK61 1670 aaKnown RBP16.62■□□□□ 0.25
DEPDC1B-206ENST00000512452 TMEM57Q8N5G2 664 aa16.62■□□□□ 0.25
DEPDC1B-206ENST00000512452 CHMP4AQ9BY43 222 aa16.62■□□□□ 0.25
DEPDC1B-206ENST00000512452 PTPRCP08575 1304 aa16.62■□□□□ 0.25
DEPDC1B-206ENST00000512452 PAPPAQ13219 1627 aa16.62■□□□□ 0.25
DEPDC1B-206ENST00000512452 PCNTO95613 3336 aa16.62■□□□□ 0.25
DEPDC1B-206ENST00000512452 IGHDP01880 384 aa16.61■□□□□ 0.25
DEPDC1B-206ENST00000512452 HDAC1Q13547 482 aaPredicted RBP16.61■□□□□ 0.25
DEPDC1B-206ENST00000512452 ITPRIPQ8IWB1 547 aa16.61■□□□□ 0.25
DEPDC1B-206ENST00000512452 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
DEPDC1B-206ENST00000512452 PCDHB15Q9Y5E8 787 aa16.61■□□□□ 0.25
DEPDC1B-206ENST00000512452 COL18A1P39060 1754 aa16.6■□□□□ 0.25
DEPDC1B-206ENST00000512452 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
DEPDC1B-206ENST00000512452 AKAP4Q5JQC9 854 aa16.6■□□□□ 0.25
DEPDC1B-206ENST00000512452 ERBB3P21860 1342 aa16.6■□□□□ 0.25
DEPDC1B-206ENST00000512452 PNPLA7Q6ZV29 1317 aa16.6■□□□□ 0.25
DEPDC1B-206ENST00000512452 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
DEPDC1B-206ENST00000512452 AKT1S1Q96B36 256 aa16.59■□□□□ 0.25
DEPDC1B-206ENST00000512452 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
DEPDC1B-206ENST00000512452 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
DEPDC1B-206ENST00000512452 USHBP1Q8N6Y0 703 aa16.58■□□□□ 0.24
DEPDC1B-206ENST00000512452 BACH2Q9BYV9 841 aa16.58■□□□□ 0.24
DEPDC1B-206ENST00000512452 RGPD2P0DJD1 1756 aa16.58■□□□□ 0.24
DEPDC1B-206ENST00000512452 ZBTB7CA1YPR0 619 aa16.57■□□□□ 0.24
DEPDC1B-206ENST00000512452 PDE4AP27815 886 aa16.57■□□□□ 0.24
DEPDC1B-206ENST00000512452 LRRC4BQ9NT99 713 aa16.57■□□□□ 0.24
DEPDC1B-206ENST00000512452 HOXB7P09629 217 aa16.56■□□□□ 0.24
DEPDC1B-206ENST00000512452 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
DEPDC1B-206ENST00000512452 PRDM10Q9NQV6 1147 aa16.56■□□□□ 0.24
DEPDC1B-206ENST00000512452 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.56■□□□□ 0.249e-7■■□□□ 12
DEPDC1B-206ENST00000512452 ZBTB7BO15156 539 aaPredicted RBP16.55■□□□□ 0.24
DEPDC1B-206ENST00000512452 RGS19P49795 217 aa16.55■□□□□ 0.24
DEPDC1B-206ENST00000512452 ZNF530Q6P9A1 599 aaPredicted RBP16.55■□□□□ 0.24
DEPDC1B-206ENST00000512452 ABHD8Q96I13 439 aa16.55■□□□□ 0.24
DEPDC1B-206ENST00000512452 TFCP2L1Q9NZI6 479 aa16.55■□□□□ 0.24
DEPDC1B-206ENST00000512452 AXIN2Q9Y2T1 843 aa16.55■□□□□ 0.24
DEPDC1B-206ENST00000512452 ADAMTS7Q9UKP4 1686 aa16.55■□□□□ 0.24
DEPDC1B-206ENST00000512452 C1orf141Q5JVX7 400 aa16.54■□□□□ 0.24
DEPDC1B-206ENST00000512452 CCDC30Q5VVM6 783 aa16.54■□□□□ 0.24
DEPDC1B-206ENST00000512452 CACNA1FO60840 1977 aa16.54■□□□□ 0.24
DEPDC1B-206ENST00000512452 STK31Q9BXU1 1019 aa16.53■□□□□ 0.24
DEPDC1B-206ENST00000512452 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
DEPDC1B-206ENST00000512452 RGPD5Q99666 1765 aa16.53■□□□□ 0.24
DEPDC1B-206ENST00000512452 QSER1Q2KHR3 1735 aa16.53■□□□□ 0.24
DEPDC1B-206ENST00000512452 KRT24Q2M2I5 525 aa16.52■□□□□ 0.24
DEPDC1B-206ENST00000512452 SMC5Q8IY18 1101 aa16.52■□□□□ 0.24
DEPDC1B-206ENST00000512452 RAPGEF4Q8WZA2 1011 aa16.52■□□□□ 0.24
DEPDC1B-206ENST00000512452 COL5A2P05997 1499 aaPredicted RBP16.52■□□□□ 0.23
DEPDC1B-206ENST00000512452 RNMTO43148 476 aaKnown RBP16.51■□□□□ 0.23
DEPDC1B-206ENST00000512452 TEFQ10587 303 aa16.51■□□□□ 0.23
DEPDC1B-206ENST00000512452 CDCA7Q9BWT1 371 aaPredicted RBP16.51■□□□□ 0.23
DEPDC1B-206ENST00000512452 MIS18AQ9NYP9 233 aa16.51■□□□□ 0.23
DEPDC1B-206ENST00000512452 FOXN1O15353 648 aa16.5■□□□□ 0.23
DEPDC1B-206ENST00000512452 SLC4A2P04920 1241 aa16.5■□□□□ 0.23
DEPDC1B-206ENST00000512452 TATP17735 454 aaPredicted RBP16.5■□□□□ 0.23
DEPDC1B-206ENST00000512452 SPG7Q9UQ90 795 aa16.5■□□□□ 0.23
DEPDC1B-206ENST00000512452 TOM1L2Q6ZVM7 507 aa16.49■□□□□ 0.23
DEPDC1B-206ENST00000512452 ACSBG1Q96GR2 724 aa16.49■□□□□ 0.23
DEPDC1B-206ENST00000512452 PDZRN3Q9UPQ7 1066 aa16.49■□□□□ 0.23
DEPDC1B-206ENST00000512452 PXDNLA1KZ92 1463 aa16.48■□□□□ 0.23
DEPDC1B-206ENST00000512452 EXOC5O00471 708 aa16.48■□□□□ 0.23
DEPDC1B-206ENST00000512452 ANP32AP39687 249 aaKnown RBP16.48■□□□□ 0.23
DEPDC1B-206ENST00000512452 CCT4P50991 539 aaKnown RBP16.48■□□□□ 0.23
DEPDC1B-206ENST00000512452 SMC1BQ8NDV3 1235 aa16.48■□□□□ 0.23
DEPDC1B-206ENST00000512452 GCC1Q96CN9 775 aa16.48■□□□□ 0.23
DEPDC1B-206ENST00000512452 NLRP2Q9NX02 1062 aa16.48■□□□□ 0.23
DEPDC1B-206ENST00000512452 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
DEPDC1B-206ENST00000512452 SIPA1L3O60292 1781 aaPredicted RBP16.47■□□□□ 0.23
DEPDC1B-206ENST00000512452 RGS3P49796 1198 aa16.47■□□□□ 0.23
DEPDC1B-206ENST00000512452 EIF4A1P60842 406 aaKnown RBP16.47■□□□□ 0.23
DEPDC1B-206ENST00000512452 LGR6Q9HBX8 967 aa16.47■□□□□ 0.23
DEPDC1B-206ENST00000512452 N4BP2Q86UW6 1770 aaPredicted RBP16.46■□□□□ 0.23
DEPDC1B-206ENST00000512452 HSP90AB1P08238 724 aaKnown RBP16.46■□□□□ 0.23
DEPDC1B-206ENST00000512452 CSB-PGBD3P0DP91 1061 aa16.46■□□□□ 0.23
DEPDC1B-206ENST00000512452 MSL1Q68DK7 614 aa16.46■□□□□ 0.23
DEPDC1B-206ENST00000512452 CCDC85CA6NKD9 419 aa16.45■□□□□ 0.22
DEPDC1B-206ENST00000512452 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
DEPDC1B-206ENST00000512452 C8orf34Q49A92 452 aa16.45■□□□□ 0.22
DEPDC1B-206ENST00000512452 SLC27A3Q5K4L6 730 aa16.45■□□□□ 0.22
DEPDC1B-206ENST00000512452 HEG1Q9ULI3 1381 aa16.45■□□□□ 0.22
DEPDC1B-206ENST00000512452 VIRMAQ69YN4 1812 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms