RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 MTFR1Q15390 333 aa6.94□□□□□ -1.3
CALCOCO2-220ENST00000511816 TNS4Q8IZW8 715 aa6.94□□□□□ -1.3
CALCOCO2-220ENST00000511816 SCG3Q8WXD2 468 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-220ENST00000511816 IRF7Q92985 503 aa6.94□□□□□ -1.3
CALCOCO2-220ENST00000511816 SCHIP1Q9P0W5 487 aaPredicted RBP6.94□□□□□ -1.3
CALCOCO2-220ENST00000511816 CCDC9Q9Y3X0 531 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-220ENST00000511816 PPP1R12BO60237 982 aaPredicted RBP6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 WFS1O76024 890 aa6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 PSMA6P60900 246 aaKnown RBP6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 WDR44Q5JSH3 913 aa6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 CCDC155Q8N6L0 562 aa6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 RHBDD1Q8TEB9 315 aa6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 CHMP7Q8WUX9 453 aaPredicted RBP6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 COL26A1Q96A83 441 aa6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 GRIP2Q9C0E4 1043 aa6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 GZF1Q9H116 711 aaPredicted RBP6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 TIMMDC1Q9NPL8 285 aa6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 IVNS1ABPQ9Y6Y0 642 aa6.93□□□□□ -1.3
CALCOCO2-220ENST00000511816 SPATA31C2B4DYI2 1134 aa6.92□□□□□ -1.3
CALCOCO2-220ENST00000511816 H7C1W4 665 aa6.92□□□□□ -1.3
CALCOCO2-220ENST00000511816 RHOQP17081 205 aa6.92□□□□□ -1.3
CALCOCO2-220ENST00000511816 POU4F2Q12837 409 aa6.92□□□□□ -1.3
CALCOCO2-220ENST00000511816 OCLNQ16625 522 aa6.92□□□□□ -1.3
CALCOCO2-220ENST00000511816 TMCO4Q5TGY1 634 aa6.92□□□□□ -1.3
CALCOCO2-220ENST00000511816 NBPF10Q6P3W6 841 aaKnown RBP6.92□□□□□ -1.3
CALCOCO2-220ENST00000511816 SLC9A9Q8IVB4 645 aa6.92□□□□□ -1.3
CALCOCO2-220ENST00000511816 STAG2Q8N3U4 1231 aa6.92□□□□□ -1.3
CALCOCO2-220ENST00000511816 EPHA4P54764 986 aa6.91□□□□□ -1.3
CALCOCO2-220ENST00000511816 FOXR1Q6PIV2 292 aa6.91□□□□□ -1.3
CALCOCO2-220ENST00000511816 TXNDC2Q86VQ3 553 aa6.91□□□□□ -1.3
CALCOCO2-220ENST00000511816 PGBD3Q8N328 593 aa6.91□□□□□ -1.3
CALCOCO2-220ENST00000511816 NIFKQ9BYG3 293 aaKnown RBP6.91□□□□□ -1.3
CALCOCO2-220ENST00000511816 TSPAN10Q9H1Z9 355 aaPredicted RBP6.91□□□□□ -1.3
CALCOCO2-220ENST00000511816 CABP1Q9NZU7 370 aa6.91□□□□□ -1.3
CALCOCO2-220ENST00000511816 A0A1B0GTH6 734 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 SERTM1A2A2V5 107 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 SLC35F4A4IF30 521 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 H3BM21 787 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 PPFIA3O75145 1194 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 STAU1O95793 577 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 VEGFBP49765 207 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 FOXK2Q01167 660 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 NBPF1Q3BBV0 1214 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 PHLDB3Q6NSJ2 640 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 RIPOR1Q6ZS17 1223 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 PPARGC1BQ86YN6 1023 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 GAS2L1Q99501 681 aaPredicted RBP6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 ZNF232Q9UNY5 417 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 DYRK1BQ9Y463 629 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 HRH3Q9Y5N1 445 aa6.9□□□□□ -1.3
CALCOCO2-220ENST00000511816 CDC14CA4D256 554 aa6.89□□□□□ -1.31
CALCOCO2-220ENST00000511816 LGR5O75473 907 aa6.89□□□□□ -1.31
CALCOCO2-220ENST00000511816 ITGA6P23229 1130 aa6.89□□□□□ -1.31
CALCOCO2-220ENST00000511816 FKBP5Q13451 457 aaPredicted RBP6.89□□□□□ -1.31
CALCOCO2-220ENST00000511816 TREML4Q6UXN2 200 aa6.89□□□□□ -1.31
CALCOCO2-220ENST00000511816 GMCL1Q96IK5 515 aa6.89□□□□□ -1.31
CALCOCO2-220ENST00000511816 MKNK1Q9BUB5 465 aa6.89□□□□□ -1.31
CALCOCO2-220ENST00000511816 FHDC1Q9C0D6 1143 aaPredicted RBP6.89□□□□□ -1.31
CALCOCO2-220ENST00000511816 SLAIN2Q9P270 581 aa6.89□□□□□ -1.31
CALCOCO2-220ENST00000511816 EGFL7Q9UHF1 273 aa6.89□□□□□ -1.31
CALCOCO2-220ENST00000511816 ABL1P00519 1130 aa6.88□□□□□ -1.31
CALCOCO2-220ENST00000511816 TATP17735 454 aaPredicted RBP6.88□□□□□ -1.31
CALCOCO2-220ENST00000511816 PHKA2P46019 1235 aa6.88□□□□□ -1.31
CALCOCO2-220ENST00000511816 PLA2G4AP47712 749 aa6.88□□□□□ -1.31
CALCOCO2-220ENST00000511816 SF3B2Q13435 895 aaKnown RBP6.88□□□□□ -1.31
CALCOCO2-220ENST00000511816 TEAD4Q15561 434 aa6.88□□□□□ -1.31
CALCOCO2-220ENST00000511816 C2orf49Q9BVC5 232 aaPredicted RBP6.88□□□□□ -1.31
CALCOCO2-220ENST00000511816 F11P03951 625 aa6.87□□□□□ -1.31
CALCOCO2-220ENST00000511816 NOS2P35228 1153 aa6.87□□□□□ -1.31
CALCOCO2-220ENST00000511816 HIF1AQ16665 826 aa6.87□□□□□ -1.31
CALCOCO2-220ENST00000511816 C4orf17Q53FE4 359 aa6.87□□□□□ -1.31
CALCOCO2-220ENST00000511816 SND1Q7KZF4 910 aaKnown RBP eCLIP6.87□□□□□ -1.31
CALCOCO2-220ENST00000511816 SV2AQ7L0J3 742 aa6.87□□□□□ -1.31
CALCOCO2-220ENST00000511816 AIDAQ96BJ3 306 aa6.87□□□□□ -1.31
CALCOCO2-220ENST00000511816 TRERF1Q96PN7 1200 aa6.87□□□□□ -1.31
CALCOCO2-220ENST00000511816 C21orf2O43822 256 aa6.86□□□□□ -1.31
CALCOCO2-220ENST00000511816 FKBP4Q02790 459 aaKnown RBP eCLIP6.86□□□□□ -1.31
CALCOCO2-220ENST00000511816 NFX1Q12986 1120 aaKnown RBP6.86□□□□□ -1.31
CALCOCO2-220ENST00000511816 CCDC27Q2M243 656 aa6.86□□□□□ -1.31
CALCOCO2-220ENST00000511816 EFHC2Q5JST6 749 aa6.86□□□□□ -1.31
CALCOCO2-220ENST00000511816 TBCELQ5QJ74 424 aa6.86□□□□□ -1.31
CALCOCO2-220ENST00000511816 C16orf46Q6P387 395 aa6.86□□□□□ -1.31
CALCOCO2-220ENST00000511816 GLYCTKQ8IVS8 523 aa6.86□□□□□ -1.31
CALCOCO2-220ENST00000511816 L3MBTL2Q969R5 705 aa6.86□□□□□ -1.31
CALCOCO2-220ENST00000511816 IQSEC3Q9UPP2 1182 aaPredicted RBP6.86□□□□□ -1.31
CALCOCO2-220ENST00000511816 SENP3-EIF4A1A0A087X0R7 540 aa6.85□□□□□ -1.31
CALCOCO2-220ENST00000511816 SOWAHDA6NJG2 315 aa6.85□□□□□ -1.31
CALCOCO2-220ENST00000511816 HIRAP54198 1017 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-220ENST00000511816 GTF3C2Q8WUA4 911 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-220ENST00000511816 GPAMQ9HCL2 828 aa6.85□□□□□ -1.31
CALCOCO2-220ENST00000511816 BIN2Q9UBW5 565 aaPredicted RBP6.85□□□□□ -1.31
CALCOCO2-220ENST00000511816 GJA3Q9Y6H8 435 aa6.85□□□□□ -1.31
CALCOCO2-220ENST00000511816 FAM13AO94988 1023 aa6.84□□□□□ -1.31
CALCOCO2-220ENST00000511816 SERPINB4P48594 390 aa6.84□□□□□ -1.31
CALCOCO2-220ENST00000511816 LBRQ14739 615 aaKnown RBP6.84□□□□□ -1.31
CALCOCO2-220ENST00000511816 NAA30Q147X3 362 aaPredicted RBP6.84□□□□□ -1.31
CALCOCO2-220ENST00000511816 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
CALCOCO2-220ENST00000511816 C1orf53Q5VUE5 145 aa6.84□□□□□ -1.31
CALCOCO2-220ENST00000511816 ALKBH2Q6NS38 261 aa6.84□□□□□ -1.31
CALCOCO2-220ENST00000511816 TRIM22Q8IYM9 498 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms