RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
CALCOCO2-220ENST00000511816 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
CALCOCO2-220ENST00000511816 SENP3Q9H4L4 574 aaPredicted RBP16.38■□□□□ 0.21
CALCOCO2-220ENST00000511816 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
CALCOCO2-220ENST00000511816 FOXD1Q16676 465 aa15.42■□□□□ 0.06
CALCOCO2-220ENST00000511816 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
CALCOCO2-220ENST00000511816 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
CALCOCO2-220ENST00000511816 ADRA2BP18089 450 aa14.46□□□□□ -0.09
CALCOCO2-220ENST00000511816 PPP6R1Q9UPN7 881 aa14.4□□□□□ -0.1
CALCOCO2-220ENST00000511816 PIAS4Q8N2W9 510 aaPredicted RBP14.33□□□□□ -0.12
CALCOCO2-220ENST00000511816 MSH5O43196 834 aa14.27□□□□□ -0.13
CALCOCO2-220ENST00000511816 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
CALCOCO2-220ENST00000511816 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
CALCOCO2-220ENST00000511816 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
CALCOCO2-220ENST00000511816 NCBP3Q53F19 620 aaKnown RBP13.15□□□□□ -0.3
CALCOCO2-220ENST00000511816 CNKSR2Q8WXI2 1034 aa13.06□□□□□ -0.32
CALCOCO2-220ENST00000511816 DMRT2Q9Y5R5 561 aa13.01□□□□□ -0.33
CALCOCO2-220ENST00000511816 KCNA4P22459 653 aa12.97□□□□□ -0.33
CALCOCO2-220ENST00000511816 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
CALCOCO2-220ENST00000511816 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
CALCOCO2-220ENST00000511816 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
CALCOCO2-220ENST00000511816 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
CALCOCO2-220ENST00000511816 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
CALCOCO2-220ENST00000511816 DNAJC5BQ9UF47 199 aa12.41□□□□□ -0.42
CALCOCO2-220ENST00000511816 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
CALCOCO2-220ENST00000511816 RNF39Q9H2S5 420 aa12.34□□□□□ -0.43
CALCOCO2-220ENST00000511816 EHMT2Q96KQ7 1210 aa12.23□□□□□ -0.45
CALCOCO2-220ENST00000511816 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.22□□□□□ -0.452e-10■■□□□ 14.5
CALCOCO2-220ENST00000511816 FOXD4L1Q9NU39 408 aa12.04□□□□□ -0.48
CALCOCO2-220ENST00000511816 SLC4A2P04920 1241 aa12.02□□□□□ -0.49
CALCOCO2-220ENST00000511816 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
CALCOCO2-220ENST00000511816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.94□□□□□ -0.5
CALCOCO2-220ENST00000511816 HNRNPUL2Q1KMD3 747 aaKnown RBP11.94□□□□□ -0.5
CALCOCO2-220ENST00000511816 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
CALCOCO2-220ENST00000511816 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
CALCOCO2-220ENST00000511816 U3KPZ7 1027 aaPredicted RBP11.89□□□□□ -0.51
CALCOCO2-220ENST00000511816 APLP2Q06481 763 aa11.87□□□□□ -0.51
CALCOCO2-220ENST00000511816 ZBTB22O15209 634 aa11.84□□□□□ -0.51
CALCOCO2-220ENST00000511816 SAMD1Q6SPF0 538 aaPredicted RBP11.84□□□□□ -0.51
CALCOCO2-220ENST00000511816 CAPN15O75808 1086 aa11.65□□□□□ -0.54
CALCOCO2-220ENST00000511816 ATXN8OSP0DMR3 200 aa11.64□□□□□ -0.55
CALCOCO2-220ENST00000511816 ZNF219Q9P2Y4 722 aaPredicted RBP11.61□□□□□ -0.55
CALCOCO2-220ENST00000511816 TRHP20396 242 aaPredicted RBP11.56□□□□□ -0.56
CALCOCO2-220ENST00000511816 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
CALCOCO2-220ENST00000511816 DSG3P32926 999 aa11.48□□□□□ -0.57
CALCOCO2-220ENST00000511816 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
CALCOCO2-220ENST00000511816 ABCB7O75027 752 aa11.36□□□□□ -0.59
CALCOCO2-220ENST00000511816 POLA2Q14181 598 aa11.33□□□□□ -0.6
CALCOCO2-220ENST00000511816 ZBTB12Q9Y330 459 aaPredicted RBP11.28□□□□□ -0.6
CALCOCO2-220ENST00000511816 POTEHQ6S545 545 aa11.22□□□□□ -0.61
CALCOCO2-220ENST00000511816 FBLN2P98095 1184 aa11.2□□□□□ -0.62
CALCOCO2-220ENST00000511816 RBM42Q9BTD8 480 aaKnown RBP10.98□□□□□ -0.65
CALCOCO2-220ENST00000511816 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
CALCOCO2-220ENST00000511816 OSCARQ8IYS5 282 aa10.93□□□□□ -0.66
CALCOCO2-220ENST00000511816 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
CALCOCO2-220ENST00000511816 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
CALCOCO2-220ENST00000511816 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
CALCOCO2-220ENST00000511816 ZNF692Q9BU19 519 aaPredicted RBP10.84□□□□□ -0.67
CALCOCO2-220ENST00000511816 FKBP8Q14318 412 aa10.83□□□□□ -0.68
CALCOCO2-220ENST00000511816 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
CALCOCO2-220ENST00000511816 AKT1S1Q96B36 256 aa10.76□□□□□ -0.69
CALCOCO2-220ENST00000511816 CHRDL2Q6WN34 429 aa10.71□□□□□ -0.69
CALCOCO2-220ENST00000511816 SSUH2Q9Y2M2 353 aa10.71□□□□□ -0.69
CALCOCO2-220ENST00000511816 PABPN1Q86U42 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
CALCOCO2-220ENST00000511816 REM2Q8IYK8 340 aaPredicted RBP10.61□□□□□ -0.71
CALCOCO2-220ENST00000511816 SPDYE1Q8NFV5 336 aaPredicted RBP10.61□□□□□ -0.71
CALCOCO2-220ENST00000511816 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
CALCOCO2-220ENST00000511816 CLEC11AQ9Y240 323 aa10.55□□□□□ -0.72
CALCOCO2-220ENST00000511816 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
CALCOCO2-220ENST00000511816 PROM2Q8N271 834 aa10.51□□□□□ -0.73
CALCOCO2-220ENST00000511816 PITPNM1O00562 1244 aa10.48□□□□□ -0.73
CALCOCO2-220ENST00000511816 PIP4P2Q8N4L2 257 aa10.47□□□□□ -0.73
CALCOCO2-220ENST00000511816 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
CALCOCO2-220ENST00000511816 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
CALCOCO2-220ENST00000511816 PLEKHG5O94827 1062 aa10.41□□□□□ -0.74
CALCOCO2-220ENST00000511816 SP7Q8TDD2 431 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO2-220ENST00000511816 FXR2P51116 673 aaKnown RBP eCLIP10.4□□□□□ -0.74
CALCOCO2-220ENST00000511816 EVX2Q03828 476 aa10.35□□□□□ -0.75
CALCOCO2-220ENST00000511816 MIER1Q8N108 512 aa10.32□□□□□ -0.76
CALCOCO2-220ENST00000511816 PLCD3Q8N3E9 789 aa10.32□□□□□ -0.76
CALCOCO2-220ENST00000511816 ZBTB47Q9UFB7 747 aaPredicted RBP10.28□□□□□ -0.76
CALCOCO2-220ENST00000511816 VASPP50552 380 aaPredicted RBP10.27□□□□□ -0.77
CALCOCO2-220ENST00000511816 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
CALCOCO2-220ENST00000511816 PRKAR2AP13861 404 aaKnown RBP10.26□□□□□ -0.77
CALCOCO2-220ENST00000511816 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
CALCOCO2-220ENST00000511816 NPM1P06748 294 aaKnown RBP eCLIP10.19□□□□□ -0.78
CALCOCO2-220ENST00000511816 CHADLQ6NUI6 762 aa10.19□□□□□ -0.78
CALCOCO2-220ENST00000511816 HAX1O00165 279 aa10.18□□□□□ -0.78
CALCOCO2-220ENST00000511816 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
CALCOCO2-220ENST00000511816 FARP1Q9Y4F1 1045 aaPredicted RBP10.14□□□□□ -0.79
CALCOCO2-220ENST00000511816 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
CALCOCO2-220ENST00000511816 C19orf67A6NJJ6 358 aa10.07□□□□□ -0.8
CALCOCO2-220ENST00000511816 IFNLR1Q8IU57 520 aaPredicted RBP10.05□□□□□ -0.8
CALCOCO2-220ENST00000511816 SPOCK2Q92563 424 aa10.05□□□□□ -0.8
CALCOCO2-220ENST00000511816 MNX1P50219 401 aaPredicted RBP10.02□□□□□ -0.81
CALCOCO2-220ENST00000511816 FAM212AQ96EL1 285 aa10.01□□□□□ -0.81
CALCOCO2-220ENST00000511816 CD44P16070 742 aaKnown RBP9.98□□□□□ -0.81
CALCOCO2-220ENST00000511816 GSE1Q14687 1217 aa9.96□□□□□ -0.82
CALCOCO2-220ENST00000511816 DCAF8Q5TAQ9 597 aa9.95□□□□□ -0.82
CALCOCO2-220ENST00000511816 GABBR2O75899 941 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms