RNA–Protein interactions for RNA: ENST00000511298.1

CDS1-202, Transcript of CDP-diacylglycerol synthase 1, humanhuman

TSL 5

Gene CDS1, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-202ENST00000511298 UBR2Q8IWV8 1755 aa28.78■■■□□ 2.2
CDS1-202ENST00000511298 GYS1P13807 737 aa28.77■■■□□ 2.2
CDS1-202ENST00000511298 NLGN1Q8N2Q7 840 aa28.77■■■□□ 2.2
CDS1-202ENST00000511298 RRP7AQ9Y3A4 280 aaKnown RBP28.77■■■□□ 2.2
CDS1-202ENST00000511298 LMOD3Q0VAK6 560 aa28.76■■■□□ 2.19
CDS1-202ENST00000511298 MYH14Q7Z406 1995 aaKnown RBP28.75■■■□□ 2.19
CDS1-202ENST00000511298 SNRPA1P09661 255 aaKnown RBP28.75■■■□□ 2.19
CDS1-202ENST00000511298 USP16Q9Y5T5 823 aa28.75■■■□□ 2.19
CDS1-202ENST00000511298 TRIM35Q9UPQ4 493 aa28.74■■■□□ 2.19
CDS1-202ENST00000511298 USP42Q9H9J4 1324 aaKnown RBP28.73■■■□□ 2.19
CDS1-202ENST00000511298 CANXP27824 592 aaKnown RBP28.73■■■□□ 2.19
CDS1-202ENST00000511298 EIF5P55010 431 aaKnown RBP28.73■■■□□ 2.19
CDS1-202ENST00000511298 NEUROD2Q15784 382 aa28.73■■■□□ 2.19
CDS1-202ENST00000511298 SRP68Q9UHB9 627 aaKnown RBP28.73■■■□□ 2.19
CDS1-202ENST00000511298 PRAMEF22A3QJZ6 481 aa28.72■■■□□ 2.19
CDS1-202ENST00000511298 A1BGP04217 495 aa28.71■■■□□ 2.19
CDS1-202ENST00000511298 EIF4A1P60842 406 aaKnown RBP28.71■■■□□ 2.19
CDS1-202ENST00000511298 BABAM1Q9NWV8 329 aa28.71■■■□□ 2.19
CDS1-202ENST00000511298 MMP10P09238 476 aa28.7■■■□□ 2.18
CDS1-202ENST00000511298 NARFQ9UHQ1 456 aa28.69■■■□□ 2.18
CDS1-202ENST00000511298 CD2APQ9Y5K6 639 aa28.69■■■□□ 2.18
CDS1-202ENST00000511298 COL15A1P39059 1388 aa28.68■■■□□ 2.18
CDS1-202ENST00000511298 APAF1O14727 1248 aa28.68■■■□□ 2.18
CDS1-202ENST00000511298 IL6STP40189 918 aaPredicted RBP28.68■■■□□ 2.18
CDS1-202ENST00000511298 MRS2Q9HD23 443 aa28.68■■■□□ 2.18
CDS1-202ENST00000511298 ZPR1O75312 459 aa28.67■■■□□ 2.18
CDS1-202ENST00000511298 GIGYF1O75420 1035 aaPredicted RBP28.67■■■□□ 2.18
CDS1-202ENST00000511298 FKBP8Q14318 412 aa28.67■■■□□ 2.18
CDS1-202ENST00000511298 USPL1Q5W0Q7 1092 aa28.67■■■□□ 2.18
CDS1-202ENST00000511298 KLHL34Q8N239 644 aa28.67■■■□□ 2.18
CDS1-202ENST00000511298 DLG5Q8TDM6 1919 aa28.67■■■□□ 2.18
CDS1-202ENST00000511298 A0A087WZG4 1122 aa28.66■■■□□ 2.18
CDS1-202ENST00000511298 NLGN2Q8NFZ4 835 aa28.65■■■□□ 2.18
CDS1-202ENST00000511298 BCL2L12Q9HB09 334 aa28.65■■■□□ 2.18
CDS1-202ENST00000511298 TSPYL4Q9UJ04 414 aa28.65■■■□□ 2.18
CDS1-202ENST00000511298 CHL1O00533 1208 aa28.64■■■□□ 2.18
CDS1-202ENST00000511298 TM4SF1P30408 202 aa28.64■■■□□ 2.18
CDS1-202ENST00000511298 NBPF26B4DH59 902 aa28.61■■■□□ 2.17
CDS1-202ENST00000511298 NBPF10Q6P3W6 841 aaKnown RBP28.61■■■□□ 2.17
CDS1-202ENST00000511298 NBPF15Q8N660 670 aa28.61■■■□□ 2.17
CDS1-202ENST00000511298 DCAF8L1A6NGE4 600 aa28.6■■■□□ 2.17
CDS1-202ENST00000511298 PARP3Q9Y6F1 533 aa28.6■■■□□ 2.17
CDS1-202ENST00000511298 PIP4K2AP48426 406 aaPredicted RBP28.59■■■□□ 2.17
CDS1-202ENST00000511298 DDR1Q08345 913 aa28.59■■■□□ 2.17
CDS1-202ENST00000511298 TBC1D2BQ9UPU7 963 aa28.59■■■□□ 2.17
CDS1-202ENST00000511298 C4AP0C0L4 1744 aa28.58■■■□□ 2.17
CDS1-202ENST00000511298 ZNF330Q9Y3S2 320 aaPredicted RBP28.58■■■□□ 2.17
CDS1-202ENST00000511298 NFIXQ14938 502 aa28.57■■■□□ 2.16
CDS1-202ENST00000511298 POLRMTO00411 1230 aaKnown RBP28.56■■■□□ 2.16
CDS1-202ENST00000511298 KDM3BQ7LBC6 1761 aa28.56■■■□□ 2.16
CDS1-202ENST00000511298 CFAP44Q96MT7 982 aa28.56■■■□□ 2.16
CDS1-202ENST00000511298 CAMTA2O94983 1202 aa28.55■■■□□ 2.16
CDS1-202ENST00000511298 ZNF853P0CG23 659 aa28.55■■■□□ 2.16
CDS1-202ENST00000511298 NPM2Q86SE8 214 aaKnown RBP28.55■■■□□ 2.16
CDS1-202ENST00000511298 DZIP3Q86Y13 1208 aaKnown RBP28.54■■■□□ 2.16
CDS1-202ENST00000511298 LAS1LQ9Y4W2 734 aaKnown RBP28.54■■■□□ 2.16
CDS1-202ENST00000511298 NCBP3Q53F19 620 aaKnown RBP28.53■■■□□ 2.16
CDS1-202ENST00000511298 CCDC27Q2M243 656 aa28.52■■■□□ 2.16
CDS1-202ENST00000511298 TGFB2P61812 414 aa28.51■■■□□ 2.15
CDS1-202ENST00000511298 CALD1Q05682 793 aaKnown RBP28.51■■■□□ 2.15
CDS1-202ENST00000511298 C10orf71Q711Q0 1435 aa28.51■■■□□ 2.15
CDS1-202ENST00000511298 GPR162Q16538 588 aa28.5■■■□□ 2.15
CDS1-202ENST00000511298 TBC1D9BQ66K14 1250 aa28.5■■■□□ 2.15
CDS1-202ENST00000511298 IFT57Q9NWB7 429 aa28.5■■■□□ 2.15
CDS1-202ENST00000511298 ERBB4Q15303 1308 aa28.49■■■□□ 2.15
CDS1-202ENST00000511298 RGL2O15211 777 aa28.49■■■□□ 2.15
CDS1-202ENST00000511298 CLEC4GQ6UXB4 293 aa28.49■■■□□ 2.15
CDS1-202ENST00000511298 MBIPQ9NS73 344 aa28.49■■■□□ 2.15
CDS1-202ENST00000511298 SERPINB2P05120 415 aa28.48■■■□□ 2.15
CDS1-202ENST00000511298 PDIA6Q15084 440 aa28.48■■■□□ 2.15
CDS1-202ENST00000511298 KRT24Q2M2I5 525 aa28.48■■■□□ 2.15
CDS1-202ENST00000511298 GNAI1P63096 354 aa28.47■■■□□ 2.15
CDS1-202ENST00000511298 YBX3P16989 372 aaKnown RBP eCLIP28.46■■■□□ 2.15
CDS1-202ENST00000511298 EIF2S2P20042 333 aaKnown RBP28.46■■■□□ 2.15
CDS1-202ENST00000511298 BICDL1Q6ZP65 573 aa28.46■■■□□ 2.15
CDS1-202ENST00000511298 LRP10Q7Z4F1 713 aa28.46■■■□□ 2.15
CDS1-202ENST00000511298 WWC1Q8IX03 1113 aa28.46■■■□□ 2.15
CDS1-202ENST00000511298 FAM9BQ8IZU0 186 aa28.45■■■□□ 2.14
CDS1-202ENST00000511298 SENP3-EIF4A1A0A087X0R7 540 aa28.44■■■□□ 2.14
CDS1-202ENST00000511298 A0A0G2JLW4 131 aa28.44■■■□□ 2.14
CDS1-202ENST00000511298 HOXB7P09629 217 aa28.44■■■□□ 2.14
CDS1-202ENST00000511298 PELP1Q8IZL8 1130 aaKnown RBP28.44■■■□□ 2.14
CDS1-202ENST00000511298 PXDNLA1KZ92 1463 aa28.43■■■□□ 2.14
CDS1-202ENST00000511298 MYL6BP14649 208 aa28.43■■■□□ 2.14
CDS1-202ENST00000511298 NGEFQ8N5V2 710 aa28.43■■■□□ 2.14
CDS1-202ENST00000511298 ERVV-1B6SEH8 477 aa28.42■■■□□ 2.14
CDS1-202ENST00000511298 DPEP1P16444 411 aa28.42■■■□□ 2.14
CDS1-202ENST00000511298 KCNA3P22001 575 aa28.42■■■□□ 2.14
CDS1-202ENST00000511298 SETDB2Q96T68 719 aa28.42■■■□□ 2.14
CDS1-202ENST00000511298 GRIN3BO60391 1043 aa28.41■■■□□ 2.14
CDS1-202ENST00000511298 HLFQ16534 295 aa28.41■■■□□ 2.14
CDS1-202ENST00000511298 TTLL7Q6ZT98 887 aa28.41■■■□□ 2.14
CDS1-202ENST00000511298 ZNF652Q9Y2D9 606 aa28.41■■■□□ 2.14
CDS1-202ENST00000511298 PROSER3Q2NL68 480 aa28.4■■■□□ 2.14
CDS1-202ENST00000511298 DUSP27Q5VZP5 1158 aa28.4■■■□□ 2.14
CDS1-202ENST00000511298 LAMB4A4D0S4 1761 aa28.39■■■□□ 2.14
CDS1-202ENST00000511298 CARMIL3Q8ND23 1372 aa28.39■■■□□ 2.14
CDS1-202ENST00000511298 MAP3K15Q6ZN16 1313 aa28.39■■■□□ 2.13
CDS1-202ENST00000511298 NECTIN2Q92692 538 aa28.38■■■□□ 2.13
CDS1-202ENST00000511298 DDX21Q9NR30 783 aaKnown RBP eCLIP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms