RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 CCDC27Q2M243 656 aa13.79□□□□□ -0.2
SKI-204ENST00000508416 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
SKI-204ENST00000508416 AMIGO3Q86WK7 504 aa13.79□□□□□ -0.2
SKI-204ENST00000508416 CCDC87Q9NVE4 849 aa13.79□□□□□ -0.2
SKI-204ENST00000508416 ZBTB7AO95365 584 aa13.78□□□□□ -0.2
SKI-204ENST00000508416 SSFA2P28290 1259 aa13.78□□□□□ -0.2
SKI-204ENST00000508416 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
SKI-204ENST00000508416 WWC1Q8IX03 1113 aa13.78□□□□□ -0.2
SKI-204ENST00000508416 CFAP44Q96MT7 982 aa13.78□□□□□ -0.2
SKI-204ENST00000508416 ATF5Q9Y2D1 282 aaPredicted RBP13.78□□□□□ -0.2
SKI-204ENST00000508416 USP16Q9Y5T5 823 aa13.78□□□□□ -0.2
SKI-204ENST00000508416 PRAMEF22A3QJZ6 481 aa13.77□□□□□ -0.21
SKI-204ENST00000508416 GIGYF1O75420 1035 aaPredicted RBP13.77□□□□□ -0.21
SKI-204ENST00000508416 YY1P25490 414 aa13.77□□□□□ -0.21
SKI-204ENST00000508416 SLC16A10Q8TF71 515 aa13.77□□□□□ -0.21
SKI-204ENST00000508416 ZNF853P0CG23 659 aa13.76□□□□□ -0.21
SKI-204ENST00000508416 CANXP27824 592 aaKnown RBP13.76□□□□□ -0.21
SKI-204ENST00000508416 GNAI1P63096 354 aa13.76□□□□□ -0.21
SKI-204ENST00000508416 NGEFQ8N5V2 710 aa13.76□□□□□ -0.21
SKI-204ENST00000508416 ARHGEF1Q92888 912 aaKnown RBP13.76□□□□□ -0.21
SKI-204ENST00000508416 SPON1Q9HCB6 807 aa13.76□□□□□ -0.21
SKI-204ENST00000508416 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
SKI-204ENST00000508416 A1BGP04217 495 aa13.75□□□□□ -0.21
SKI-204ENST00000508416 ADRA2BP18089 450 aa13.75□□□□□ -0.21
SKI-204ENST00000508416 MTFR1LQ9H019 292 aa13.75□□□□□ -0.21
SKI-204ENST00000508416 MBIPQ9NS73 344 aa13.75□□□□□ -0.21
SKI-204ENST00000508416 ZBTB1Q9Y2K1 713 aa13.75□□□□□ -0.21
SKI-204ENST00000508416 RFC4P35249 363 aa13.74□□□□□ -0.21
SKI-204ENST00000508416 WDR63Q8IWG1 891 aa13.74□□□□□ -0.21
SKI-204ENST00000508416 SOS1Q07889 1333 aaPredicted RBP13.73□□□□□ -0.21
SKI-204ENST00000508416 IL16Q14005 1332 aa13.72□□□□□ -0.21
SKI-204ENST00000508416 IL6STP40189 918 aaPredicted RBP13.72□□□□□ -0.21
SKI-204ENST00000508416 PIP4K2AP48426 406 aaPredicted RBP13.72□□□□□ -0.21
SKI-204ENST00000508416 EIF5P55010 431 aaKnown RBP13.72□□□□□ -0.21
SKI-204ENST00000508416 KRT24Q2M2I5 525 aa13.72□□□□□ -0.21
SKI-204ENST00000508416 MSL1Q68DK7 614 aa13.72□□□□□ -0.21
SKI-204ENST00000508416 ZNF330Q9Y3S2 320 aaPredicted RBP13.72□□□□□ -0.21
SKI-204ENST00000508416 NBPF26B4DH59 902 aa13.71□□□□□ -0.21
SKI-204ENST00000508416 EIF2S2P20042 333 aaKnown RBP13.71□□□□□ -0.21
SKI-204ENST00000508416 PTGER2P43116 358 aa13.71□□□□□ -0.21
SKI-204ENST00000508416 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.21
SKI-204ENST00000508416 NPM2Q86SE8 214 aaKnown RBP13.71□□□□□ -0.21
SKI-204ENST00000508416 NBPF15Q8N660 670 aa13.71□□□□□ -0.21
SKI-204ENST00000508416 ARXQ96QS3 562 aa13.71□□□□□ -0.21
SKI-204ENST00000508416 LAMB4A4D0S4 1761 aa13.71□□□□□ -0.22
SKI-204ENST00000508416 A0A087WZG4 1122 aa13.7□□□□□ -0.22
SKI-204ENST00000508416 ZPR1O75312 459 aa13.7□□□□□ -0.22
SKI-204ENST00000508416 POLD1P28340 1107 aa13.7□□□□□ -0.22
SKI-204ENST00000508416 TSR2Q969E8 191 aaKnown RBP13.7□□□□□ -0.22
SKI-204ENST00000508416 SRP68Q9UHB9 627 aaKnown RBP13.7□□□□□ -0.22
SKI-204ENST00000508416 C4AP0C0L4 1744 aa13.7□□□□□ -0.22
SKI-204ENST00000508416 COL15A1P39059 1388 aa13.7□□□□□ -0.22
SKI-204ENST00000508416 ELL2O00472 640 aaPredicted RBP13.69□□□□□ -0.22
SKI-204ENST00000508416 GYS1P13807 737 aa13.69□□□□□ -0.22
SKI-204ENST00000508416 DUSP27Q5VZP5 1158 aa13.69□□□□□ -0.22
SKI-204ENST00000508416 NLGN1Q8N2Q7 840 aa13.69□□□□□ -0.22
SKI-204ENST00000508416 NECTIN2Q92692 538 aa13.69□□□□□ -0.22
SKI-204ENST00000508416 SGIP1Q9BQI5 828 aa13.69□□□□□ -0.22
SKI-204ENST00000508416 PPP1R1BQ9UD71 204 aaPredicted RBP13.69□□□□□ -0.22
SKI-204ENST00000508416 NARFQ9UHQ1 456 aa13.69□□□□□ -0.22
SKI-204ENST00000508416 TBC1D2BQ9UPU7 963 aa13.69□□□□□ -0.22
SKI-204ENST00000508416 USP42Q9H9J4 1324 aaKnown RBP13.68□□□□□ -0.22
SKI-204ENST00000508416 COL24A1Q17RW2 1714 aa13.68□□□□□ -0.22
SKI-204ENST00000508416 USPL1Q5W0Q7 1092 aa13.68□□□□□ -0.22
SKI-204ENST00000508416 C8orf58Q8NAV2 365 aa13.68□□□□□ -0.22
SKI-204ENST00000508416 ZNF521Q96K83 1311 aa13.67□□□□□ -0.22
SKI-204ENST00000508416 HOXB7P09629 217 aa13.67□□□□□ -0.22
SKI-204ENST00000508416 MYL6BP14649 208 aa13.67□□□□□ -0.22
SKI-204ENST00000508416 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
SKI-204ENST00000508416 SPINK5Q9NQ38 1064 aaPredicted RBP13.67□□□□□ -0.22
SKI-204ENST00000508416 ERBB4Q15303 1308 aa13.66□□□□□ -0.22
SKI-204ENST00000508416 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
SKI-204ENST00000508416 FKBP8Q14318 412 aa13.66□□□□□ -0.22
SKI-204ENST00000508416 PDIA6Q15084 440 aa13.66□□□□□ -0.22
SKI-204ENST00000508416 HDGFL1Q5TGJ6 251 aa13.66□□□□□ -0.22
SKI-204ENST00000508416 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
SKI-204ENST00000508416 MYH16Q9H6N6 1097 aa13.66□□□□□ -0.22
SKI-204ENST00000508416 FANCIQ9NVI1 1328 aa13.65□□□□□ -0.22
SKI-204ENST00000508416 ANXA1P04083 346 aa13.65□□□□□ -0.22
SKI-204ENST00000508416 MMP10P09238 476 aa13.65□□□□□ -0.22
SKI-204ENST00000508416 TSPYL6Q8N831 410 aa13.65□□□□□ -0.22
SKI-204ENST00000508416 BCL2L12Q9HB09 334 aa13.65□□□□□ -0.22
SKI-204ENST00000508416 CAMTA2O94983 1202 aa13.64□□□□□ -0.23
SKI-204ENST00000508416 PROSER3Q2NL68 480 aa13.64□□□□□ -0.23
SKI-204ENST00000508416 DDX21Q9NR30 783 aaKnown RBP eCLIP13.64□□□□□ -0.23
SKI-204ENST00000508416 TM4SF1P30408 202 aa13.63□□□□□ -0.23
SKI-204ENST00000508416 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
SKI-204ENST00000508416 EXOSC9Q06265 439 aaKnown RBP13.63□□□□□ -0.23
SKI-204ENST00000508416 TWISTNBQ3B726 338 aaPredicted RBP13.63□□□□□ -0.23
SKI-204ENST00000508416 TTLL7Q6ZT98 887 aa13.63□□□□□ -0.23
SKI-204ENST00000508416 CHMP4AQ9BY43 222 aa13.63□□□□□ -0.23
SKI-204ENST00000508416 CHPF2Q9P2E5 772 aa13.63□□□□□ -0.23
SKI-204ENST00000508416 DBF4Q9UBU7 674 aaPredicted RBP13.63□□□□□ -0.23
SKI-204ENST00000508416 E9PSI1 815 aa13.62□□□□□ -0.23
SKI-204ENST00000508416 SLFN5Q08AF3 891 aa13.62□□□□□ -0.23
SKI-204ENST00000508416 NFIXQ14938 502 aa13.62□□□□□ -0.23
SKI-204ENST00000508416 CCDC30Q5VVM6 783 aa13.62□□□□□ -0.23
SKI-204ENST00000508416 KIF6Q6ZMV9 814 aa13.62□□□□□ -0.23
SKI-204ENST00000508416 BICDL1Q6ZP65 573 aa13.62□□□□□ -0.23
SKI-204ENST00000508416 LRP10Q7Z4F1 713 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 405.7 ms