RNA–Protein interactions for RNA: ENST00000505753.1

SIM1-203, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 2

Gene SIM1, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-203ENST00000505753 THUMPD2Q9BTF0 503 aaKnown RBP12.39□□□□□ -0.43
SIM1-203ENST00000505753 MRS2Q9HD23 443 aa12.39□□□□□ -0.43
SIM1-203ENST00000505753 RTCBQ9Y3I0 505 aaKnown RBP12.39□□□□□ -0.43
SIM1-203ENST00000505753 UBR3Q6ZT12 1888 aa12.39□□□□□ -0.43
SIM1-203ENST00000505753 KCNA4P22459 653 aa12.38□□□□□ -0.43
SIM1-203ENST00000505753 ARHGEF1Q92888 912 aaKnown RBP12.38□□□□□ -0.43
SIM1-203ENST00000505753 CCDC87Q9NVE4 849 aa12.38□□□□□ -0.43
SIM1-203ENST00000505753 DLG5Q8TDM6 1919 aa12.38□□□□□ -0.43
SIM1-203ENST00000505753 MYH14Q7Z406 1995 aaKnown RBP12.38□□□□□ -0.43
SIM1-203ENST00000505753 SOS1Q07889 1333 aaPredicted RBP12.37□□□□□ -0.43
SIM1-203ENST00000505753 CHL1O00533 1208 aa12.37□□□□□ -0.43
SIM1-203ENST00000505753 APAF1O14727 1248 aa12.37□□□□□ -0.43
SIM1-203ENST00000505753 STARD3NLO95772 234 aa12.37□□□□□ -0.43
SIM1-203ENST00000505753 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
SIM1-203ENST00000505753 EIF4A1P60842 406 aaKnown RBP12.37□□□□□ -0.43
SIM1-203ENST00000505753 CCDC27Q2M243 656 aa12.37□□□□□ -0.43
SIM1-203ENST00000505753 TRAPPC3LQ5T215 181 aa12.37□□□□□ -0.43
SIM1-203ENST00000505753 SMIM5Q71RC9 77 aa12.37□□□□□ -0.43
SIM1-203ENST00000505753 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
SIM1-203ENST00000505753 ZNF853P0CG23 659 aa12.36□□□□□ -0.43
SIM1-203ENST00000505753 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
SIM1-203ENST00000505753 RRP7AQ9Y3A4 280 aaKnown RBP12.36□□□□□ -0.43
SIM1-203ENST00000505753 USP16Q9Y5T5 823 aa12.36□□□□□ -0.43
SIM1-203ENST00000505753 GIGYF1O75420 1035 aaPredicted RBP12.35□□□□□ -0.43
SIM1-203ENST00000505753 CAPN15O75808 1086 aa12.35□□□□□ -0.43
SIM1-203ENST00000505753 MIS18AQ9NYP9 233 aa12.35□□□□□ -0.43
SIM1-203ENST00000505753 ZBTB1Q9Y2K1 713 aa12.35□□□□□ -0.43
SIM1-203ENST00000505753 USP42Q9H9J4 1324 aaKnown RBP12.35□□□□□ -0.43
SIM1-203ENST00000505753 KDM3BQ7LBC6 1761 aa12.34□□□□□ -0.43
SIM1-203ENST00000505753 PHF14O94880 888 aa12.34□□□□□ -0.43
SIM1-203ENST00000505753 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
SIM1-203ENST00000505753 GYS1P13807 737 aa12.34□□□□□ -0.43
SIM1-203ENST00000505753 IL6STP40189 918 aaPredicted RBP12.34□□□□□ -0.43
SIM1-203ENST00000505753 NLGN1Q8N2Q7 840 aa12.34□□□□□ -0.43
SIM1-203ENST00000505753 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
SIM1-203ENST00000505753 ARXQ96QS3 562 aa12.34□□□□□ -0.43
SIM1-203ENST00000505753 PRAMEF22A3QJZ6 481 aa12.33□□□□□ -0.44
SIM1-203ENST00000505753 CCER2I3L3R5 266 aa12.33□□□□□ -0.44
SIM1-203ENST00000505753 NEUROD2Q15784 382 aa12.33□□□□□ -0.44
SIM1-203ENST00000505753 NBPF26B4DH59 902 aa12.32□□□□□ -0.44
SIM1-203ENST00000505753 RGL2O15211 777 aa12.32□□□□□ -0.44
SIM1-203ENST00000505753 A1BGP04217 495 aa12.32□□□□□ -0.44
SIM1-203ENST00000505753 RFC4P35249 363 aa12.32□□□□□ -0.44
SIM1-203ENST00000505753 NBPF10Q6P3W6 841 aaKnown RBP12.32□□□□□ -0.44
SIM1-203ENST00000505753 NGEFQ8N5V2 710 aa12.32□□□□□ -0.44
SIM1-203ENST00000505753 NBPF15Q8N660 670 aa12.32□□□□□ -0.44
SIM1-203ENST00000505753 NARFQ9UHQ1 456 aa12.32□□□□□ -0.44
SIM1-203ENST00000505753 TSPYL4Q9UJ04 414 aa12.32□□□□□ -0.44
SIM1-203ENST00000505753 COL15A1P39059 1388 aa12.31□□□□□ -0.44
SIM1-203ENST00000505753 POLD1P28340 1107 aa12.31□□□□□ -0.44
SIM1-203ENST00000505753 TM4SF1P30408 202 aa12.31□□□□□ -0.44
SIM1-203ENST00000505753 CALD1Q05682 793 aaKnown RBP12.31□□□□□ -0.44
SIM1-203ENST00000505753 WWC1Q8IX03 1113 aa12.31□□□□□ -0.44
SIM1-203ENST00000505753 IFT57Q9NWB7 429 aa12.31□□□□□ -0.44
SIM1-203ENST00000505753 A0A087WZG4 1122 aa12.3□□□□□ -0.44
SIM1-203ENST00000505753 MSL1Q68DK7 614 aa12.3□□□□□ -0.44
SIM1-203ENST00000505753 LRP10Q7Z4F1 713 aa12.3□□□□□ -0.44
SIM1-203ENST00000505753 SYT17Q9BSW7 474 aa12.3□□□□□ -0.44
SIM1-203ENST00000505753 FHDC1Q9C0D6 1143 aaPredicted RBP12.3□□□□□ -0.44
SIM1-203ENST00000505753 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
SIM1-203ENST00000505753 IL16Q14005 1332 aa12.3□□□□□ -0.44
SIM1-203ENST00000505753 ERBB4Q15303 1308 aa12.3□□□□□ -0.44
SIM1-203ENST00000505753 C4AP0C0L4 1744 aa12.29□□□□□ -0.44
SIM1-203ENST00000505753 HOXB7P09629 217 aa12.29□□□□□ -0.44
SIM1-203ENST00000505753 CANXP27824 592 aaKnown RBP12.29□□□□□ -0.44
SIM1-203ENST00000505753 FKBP8Q14318 412 aa12.29□□□□□ -0.44
SIM1-203ENST00000505753 PPP1R1BQ9UD71 204 aaPredicted RBP12.29□□□□□ -0.44
SIM1-203ENST00000505753 SRP68Q9UHB9 627 aaKnown RBP12.29□□□□□ -0.44
SIM1-203ENST00000505753 CD2APQ9Y5K6 639 aa12.29□□□□□ -0.44
SIM1-203ENST00000505753 CAMTA2O94983 1202 aa12.28□□□□□ -0.44
SIM1-203ENST00000505753 MMP10P09238 476 aa12.28□□□□□ -0.44
SIM1-203ENST00000505753 GNAI1P63096 354 aa12.28□□□□□ -0.44
SIM1-203ENST00000505753 PDIA6Q15084 440 aa12.28□□□□□ -0.44
SIM1-203ENST00000505753 USPL1Q5W0Q7 1092 aa12.28□□□□□ -0.44
SIM1-203ENST00000505753 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
SIM1-203ENST00000505753 ZNF521Q96K83 1311 aa12.28□□□□□ -0.44
SIM1-203ENST00000505753 ZPR1O75312 459 aa12.27□□□□□ -0.45
SIM1-203ENST00000505753 DIEXFQ68CQ4 756 aaKnown RBP12.27□□□□□ -0.45
SIM1-203ENST00000505753 CLEC4GQ6UXB4 293 aa12.27□□□□□ -0.45
SIM1-203ENST00000505753 WDR63Q8IWG1 891 aa12.27□□□□□ -0.45
SIM1-203ENST00000505753 GOLGB1Q14789 3259 aaKnown RBP12.27□□□□□ -0.45
SIM1-203ENST00000505753 POLRMTO00411 1230 aaKnown RBP12.26□□□□□ -0.45
SIM1-203ENST00000505753 DDR1Q08345 913 aa12.26□□□□□ -0.45
SIM1-203ENST00000505753 FAM9BQ8IZU0 186 aa12.26□□□□□ -0.45
SIM1-203ENST00000505753 LAMB4A4D0S4 1761 aa12.25□□□□□ -0.45
SIM1-203ENST00000505753 NFIXQ14938 502 aa12.25□□□□□ -0.45
SIM1-203ENST00000505753 KRT24Q2M2I5 525 aa12.25□□□□□ -0.45
SIM1-203ENST00000505753 TBC1D2BQ9UPU7 963 aa12.25□□□□□ -0.45
SIM1-203ENST00000505753 ERVV-1B6SEH8 477 aa12.24□□□□□ -0.45
SIM1-203ENST00000505753 PIP4K2AP48426 406 aaPredicted RBP12.24□□□□□ -0.45
SIM1-203ENST00000505753 C10orf71Q711Q0 1435 aa12.24□□□□□ -0.45
SIM1-203ENST00000505753 DZIP3Q86Y13 1208 aaKnown RBP12.24□□□□□ -0.45
SIM1-203ENST00000505753 DUSP27Q5VZP5 1158 aa12.23□□□□□ -0.45
SIM1-203ENST00000505753 MIER1Q8N108 512 aa12.23□□□□□ -0.45
SIM1-203ENST00000505753 DDX21Q9NR30 783 aaKnown RBP eCLIP12.23□□□□□ -0.45
SIM1-203ENST00000505753 UTRNP46939 3433 aa12.23□□□□□ -0.45
SIM1-203ENST00000505753 TGFB2P61812 414 aa12.22□□□□□ -0.45
SIM1-203ENST00000505753 TBC1D9BQ66K14 1250 aa12.22□□□□□ -0.45
SIM1-203ENST00000505753 C8orf58Q8NAV2 365 aa12.22□□□□□ -0.45
SIM1-203ENST00000505753 NLGN2Q8NFZ4 835 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms