RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 CCDC87Q9NVE4 849 aa29.82■■■□□ 2.36
SPOCK1-204ENST00000505690 USP16Q9Y5T5 823 aa29.82■■■□□ 2.36
SPOCK1-204ENST00000505690 MYH14Q7Z406 1995 aaKnown RBP29.82■■■□□ 2.36
SPOCK1-204ENST00000505690 ZNF521Q96K83 1311 aa29.81■■■□□ 2.36
SPOCK1-204ENST00000505690 AMIGO3Q86WK7 504 aa29.8■■■□□ 2.36
SPOCK1-204ENST00000505690 RTCBQ9Y3I0 505 aaKnown RBP29.8■■■□□ 2.36
SPOCK1-204ENST00000505690 LAMB4A4D0S4 1761 aa29.8■■■□□ 2.36
SPOCK1-204ENST00000505690 RPS6KA4O75676 772 aa29.79■■■□□ 2.36
SPOCK1-204ENST00000505690 SSFA2P28290 1259 aa29.79■■■□□ 2.36
SPOCK1-204ENST00000505690 FLAD1Q8NFF5 587 aa29.79■■■□□ 2.36
SPOCK1-204ENST00000505690 CASZ1Q86V15 1759 aa29.79■■■□□ 2.36
SPOCK1-204ENST00000505690 PHF14O94880 888 aa29.78■■■□□ 2.36
SPOCK1-204ENST00000505690 PDGFDQ9GZP0 370 aaPredicted RBP29.78■■■□□ 2.36
SPOCK1-204ENST00000505690 ZBTB1Q9Y2K1 713 aa29.78■■■□□ 2.36
SPOCK1-204ENST00000505690 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.77■■■□□ 2.36
SPOCK1-204ENST00000505690 KRT24Q2M2I5 525 aa29.77■■■□□ 2.36
SPOCK1-204ENST00000505690 SMIM5Q71RC9 77 aa29.77■■■□□ 2.36
SPOCK1-204ENST00000505690 COL23A1Q86Y22 540 aaPredicted RBP29.76■■■□□ 2.35
SPOCK1-204ENST00000505690 TSR2Q969E8 191 aaKnown RBP29.76■■■□□ 2.35
SPOCK1-204ENST00000505690 A1BGP04217 495 aa29.75■■■□□ 2.35
SPOCK1-204ENST00000505690 CANXP27824 592 aaKnown RBP29.74■■■□□ 2.35
SPOCK1-204ENST00000505690 SPINK5Q9NQ38 1064 aaPredicted RBP29.74■■■□□ 2.35
SPOCK1-204ENST00000505690 SOS1Q07889 1333 aaPredicted RBP29.73■■■□□ 2.35
SPOCK1-204ENST00000505690 MSH5O43196 834 aa29.73■■■□□ 2.35
SPOCK1-204ENST00000505690 ADRA2BP18089 450 aa29.73■■■□□ 2.35
SPOCK1-204ENST00000505690 TRAPPC3LQ5T215 181 aa29.73■■■□□ 2.35
SPOCK1-204ENST00000505690 FANCIQ9NVI1 1328 aa29.72■■■□□ 2.35
SPOCK1-204ENST00000505690 HNRNPUQ00839 825 aaKnown RBP eCLIP29.72■■■□□ 2.35
SPOCK1-204ENST00000505690 HOXB7P09629 217 aa29.71■■■□□ 2.35
SPOCK1-204ENST00000505690 GOLGA2Q08379 1002 aa29.71■■■□□ 2.35
SPOCK1-204ENST00000505690 DUSP27Q5VZP5 1158 aa29.71■■■□□ 2.35
SPOCK1-204ENST00000505690 MYH16Q9H6N6 1097 aa29.71■■■□□ 2.35
SPOCK1-204ENST00000505690 ARHGEF1Q92888 912 aaKnown RBP29.7■■■□□ 2.35
SPOCK1-204ENST00000505690 EIF2S2P20042 333 aaKnown RBP29.69■■■□□ 2.34
SPOCK1-204ENST00000505690 IL6STP40189 918 aaPredicted RBP29.69■■■□□ 2.34
SPOCK1-204ENST00000505690 SLC16A10Q8TF71 515 aa29.69■■■□□ 2.34
SPOCK1-204ENST00000505690 COL15A1P39059 1388 aa29.68■■■□□ 2.34
SPOCK1-204ENST00000505690 PIP4K2AP48426 406 aaPredicted RBP29.68■■■□□ 2.34
SPOCK1-204ENST00000505690 EIF5P55010 431 aaKnown RBP29.68■■■□□ 2.34
SPOCK1-204ENST00000505690 C8orf58Q8NAV2 365 aa29.68■■■□□ 2.34
SPOCK1-204ENST00000505690 C4AP0C0L4 1744 aa29.68■■■□□ 2.34
SPOCK1-204ENST00000505690 NBPF26B4DH59 902 aa29.67■■■□□ 2.34
SPOCK1-204ENST00000505690 ZBTB7AO95365 584 aa29.67■■■□□ 2.34
SPOCK1-204ENST00000505690 RFC4P35249 363 aa29.67■■■□□ 2.34
SPOCK1-204ENST00000505690 NBPF10Q6P3W6 841 aaKnown RBP29.67■■■□□ 2.34
SPOCK1-204ENST00000505690 NBPF15Q8N660 670 aa29.67■■■□□ 2.34
SPOCK1-204ENST00000505690 E9PSI1 815 aa29.66■■■□□ 2.34
SPOCK1-204ENST00000505690 ELL2O00472 640 aaPredicted RBP29.66■■■□□ 2.34
SPOCK1-204ENST00000505690 MTFR1LQ9H019 292 aa29.66■■■□□ 2.34
SPOCK1-204ENST00000505690 ZNF330Q9Y3S2 320 aaPredicted RBP29.66■■■□□ 2.34
SPOCK1-204ENST00000505690 ERBB4Q15303 1308 aa29.66■■■□□ 2.34
SPOCK1-204ENST00000505690 A0A087WZG4 1122 aa29.64■■■□□ 2.34
SPOCK1-204ENST00000505690 HDGFL1Q5TGJ6 251 aa29.64■■■□□ 2.34
SPOCK1-204ENST00000505690 NPM2Q86SE8 214 aaKnown RBP29.64■■■□□ 2.34
SPOCK1-204ENST00000505690 TSPYL6Q8N831 410 aa29.64■■■□□ 2.34
SPOCK1-204ENST00000505690 NECTIN2Q92692 538 aa29.64■■■□□ 2.34
SPOCK1-204ENST00000505690 SLFN5Q08AF3 891 aa29.63■■■□□ 2.33
SPOCK1-204ENST00000505690 EXOSC9Q06265 439 aaKnown RBP29.62■■■□□ 2.33
SPOCK1-204ENST00000505690 CDCA7LQ96GN5 454 aa29.62■■■□□ 2.33
SPOCK1-204ENST00000505690 ATF5Q9Y2D1 282 aaPredicted RBP29.62■■■□□ 2.33
SPOCK1-204ENST00000505690 TWISTNBQ3B726 338 aaPredicted RBP29.61■■■□□ 2.33
SPOCK1-204ENST00000505690 SPON1Q9HCB6 807 aa29.61■■■□□ 2.33
SPOCK1-204ENST00000505690 USP42Q9H9J4 1324 aaKnown RBP29.61■■■□□ 2.33
SPOCK1-204ENST00000505690 MYL6BP14649 208 aa29.6■■■□□ 2.33
SPOCK1-204ENST00000505690 PDIA6Q15084 440 aa29.6■■■□□ 2.33
SPOCK1-204ENST00000505690 SRP68Q9UHB9 627 aaKnown RBP29.6■■■□□ 2.33
SPOCK1-204ENST00000505690 NARFQ9UHQ1 456 aa29.6■■■□□ 2.33
SPOCK1-204ENST00000505690 ZPR1O75312 459 aa29.59■■■□□ 2.33
SPOCK1-204ENST00000505690 MSL1Q68DK7 614 aa29.58■■■□□ 2.33
SPOCK1-204ENST00000505690 CHMP4AQ9BY43 222 aa29.58■■■□□ 2.33
SPOCK1-204ENST00000505690 ZBED9Q6R2W3 1325 aa29.57■■■□□ 2.32
SPOCK1-204ENST00000505690 GYS1P13807 737 aa29.57■■■□□ 2.32
SPOCK1-204ENST00000505690 PROSER3Q2NL68 480 aa29.57■■■□□ 2.32
SPOCK1-204ENST00000505690 USPL1Q5W0Q7 1092 aa29.57■■■□□ 2.32
SPOCK1-204ENST00000505690 DZIP3Q86Y13 1208 aaKnown RBP29.57■■■□□ 2.32
SPOCK1-204ENST00000505690 ARXQ96QS3 562 aa29.57■■■□□ 2.32
SPOCK1-204ENST00000505690 DDX21Q9NR30 783 aaKnown RBP eCLIP29.57■■■□□ 2.32
SPOCK1-204ENST00000505690 CHPF2Q9P2E5 772 aa29.57■■■□□ 2.32
SPOCK1-204ENST00000505690 TBC1D2BQ9UPU7 963 aa29.57■■■□□ 2.32
SPOCK1-204ENST00000505690 COL24A1Q17RW2 1714 aa29.57■■■□□ 2.32
SPOCK1-204ENST00000505690 ANXA1P04083 346 aa29.56■■■□□ 2.32
SPOCK1-204ENST00000505690 TRMT2AQ8IZ69 625 aaKnown RBP29.56■■■□□ 2.32
SPOCK1-204ENST00000505690 DBF4Q9UBU7 674 aaPredicted RBP29.56■■■□□ 2.32
SPOCK1-204ENST00000505690 CCDC30Q5VVM6 783 aa29.55■■■□□ 2.32
SPOCK1-204ENST00000505690 LRP10Q7Z4F1 713 aa29.55■■■□□ 2.32
SPOCK1-204ENST00000505690 LRP5O75197 1615 aa29.54■■■□□ 2.32
SPOCK1-204ENST00000505690 VAMP4O75379 141 aa29.54■■■□□ 2.32
SPOCK1-204ENST00000505690 NLGN1Q8N2Q7 840 aa29.54■■■□□ 2.32
SPOCK1-204ENST00000505690 SCN7AQ01118 1682 aa29.53■■■□□ 2.32
SPOCK1-204ENST00000505690 PTGER2P43116 358 aa29.53■■■□□ 2.32
SPOCK1-204ENST00000505690 SGIP1Q9BQI5 828 aa29.53■■■□□ 2.32
SPOCK1-204ENST00000505690 CAMTA2O94983 1202 aa29.52■■■□□ 2.32
SPOCK1-204ENST00000505690 FKBP8Q14318 412 aa29.52■■■□□ 2.32
SPOCK1-204ENST00000505690 BCL2L12Q9HB09 334 aa29.52■■■□□ 2.32
SPOCK1-204ENST00000505690 BCORQ6W2J9 1755 aa29.52■■■□□ 2.32
SPOCK1-204ENST00000505690 POLD1P28340 1107 aa29.51■■■□□ 2.31
SPOCK1-204ENST00000505690 KIF6Q6ZMV9 814 aa29.5■■■□□ 2.31
SPOCK1-204ENST00000505690 TTLL7Q6ZT98 887 aa29.5■■■□□ 2.31
SPOCK1-204ENST00000505690 HYPKQ9NX55 129 aa29.5■■■□□ 2.31
SPOCK1-204ENST00000505690 COPS6Q7L5N1 327 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms