RNA–Protein interactions for RNA: ENST00000505353.1

SIL1-206, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-206ENST00000505353 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.42
SIL1-206ENST00000505353 CHL1O00533 1208 aa12.45□□□□□ -0.42
SIL1-206ENST00000505353 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
SIL1-206ENST00000505353 GYS1P13807 737 aa12.45□□□□□ -0.42
SIL1-206ENST00000505353 ARXQ96QS3 562 aa12.45□□□□□ -0.42
SIL1-206ENST00000505353 TEX13AQ9BXU3 409 aaPredicted RBP12.45□□□□□ -0.42
SIL1-206ENST00000505353 BABAM1Q9NWV8 329 aa12.45□□□□□ -0.42
SIL1-206ENST00000505353 C4AP0C0L4 1744 aa12.45□□□□□ -0.42
SIL1-206ENST00000505353 A1BGP04217 495 aa12.44□□□□□ -0.42
SIL1-206ENST00000505353 SNRPA1P09661 255 aaKnown RBP12.44□□□□□ -0.42
SIL1-206ENST00000505353 MSL1Q68DK7 614 aa12.44□□□□□ -0.42
SIL1-206ENST00000505353 SYT17Q9BSW7 474 aa12.44□□□□□ -0.42
SIL1-206ENST00000505353 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
SIL1-206ENST00000505353 MRS2Q9HD23 443 aa12.44□□□□□ -0.42
SIL1-206ENST00000505353 USP42Q9H9J4 1324 aaKnown RBP12.43□□□□□ -0.42
SIL1-206ENST00000505353 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
SIL1-206ENST00000505353 MSH5O43196 834 aa12.43□□□□□ -0.42
SIL1-206ENST00000505353 STARD3NLO95772 234 aa12.43□□□□□ -0.42
SIL1-206ENST00000505353 ZNF853P0CG23 659 aa12.43□□□□□ -0.42
SIL1-206ENST00000505353 LMOD3Q0VAK6 560 aa12.43□□□□□ -0.42
SIL1-206ENST00000505353 NEUROD2Q15784 382 aa12.43□□□□□ -0.42
SIL1-206ENST00000505353 NBPF10Q6P3W6 841 aaKnown RBP12.43□□□□□ -0.42
SIL1-206ENST00000505353 NBPF15Q8N660 670 aa12.43□□□□□ -0.42
SIL1-206ENST00000505353 FHDC1Q9C0D6 1143 aaPredicted RBP12.43□□□□□ -0.42
SIL1-206ENST00000505353 TM4SF1P30408 202 aa12.42□□□□□ -0.42
SIL1-206ENST00000505353 RFC4P35249 363 aa12.42□□□□□ -0.42
SIL1-206ENST00000505353 NCBP3Q53F19 620 aaKnown RBP12.42□□□□□ -0.42
SIL1-206ENST00000505353 NLGN1Q8N2Q7 840 aa12.42□□□□□ -0.42
SIL1-206ENST00000505353 SRP68Q9UHB9 627 aaKnown RBP12.42□□□□□ -0.42
SIL1-206ENST00000505353 POLD1P28340 1107 aa12.41□□□□□ -0.42
SIL1-206ENST00000505353 IL6STP40189 918 aaPredicted RBP12.41□□□□□ -0.42
SIL1-206ENST00000505353 FKBP8Q14318 412 aa12.41□□□□□ -0.42
SIL1-206ENST00000505353 NARFQ9UHQ1 456 aa12.41□□□□□ -0.42
SIL1-206ENST00000505353 CANXP27824 592 aaKnown RBP12.4□□□□□ -0.42
SIL1-206ENST00000505353 CCDC27Q2M243 656 aa12.4□□□□□ -0.42
SIL1-206ENST00000505353 LRP10Q7Z4F1 713 aa12.4□□□□□ -0.42
SIL1-206ENST00000505353 CFAP44Q96MT7 982 aa12.4□□□□□ -0.42
SIL1-206ENST00000505353 PPP1R1BQ9UD71 204 aaPredicted RBP12.4□□□□□ -0.42
SIL1-206ENST00000505353 COL15A1P39059 1388 aa12.4□□□□□ -0.42
SIL1-206ENST00000505353 UTRNP46939 3433 aa12.4□□□□□ -0.42
SIL1-206ENST00000505353 MMP10P09238 476 aa12.39□□□□□ -0.43
SIL1-206ENST00000505353 USPL1Q5W0Q7 1092 aa12.39□□□□□ -0.43
SIL1-206ENST00000505353 TSPYL4Q9UJ04 414 aa12.39□□□□□ -0.43
SIL1-206ENST00000505353 PIP4K2AP48426 406 aaPredicted RBP12.38□□□□□ -0.43
SIL1-206ENST00000505353 DDR1Q08345 913 aa12.38□□□□□ -0.43
SIL1-206ENST00000505353 PDIA6Q15084 440 aa12.38□□□□□ -0.43
SIL1-206ENST00000505353 KRT24Q2M2I5 525 aa12.38□□□□□ -0.43
SIL1-206ENST00000505353 WWC1Q8IX03 1113 aa12.38□□□□□ -0.43
SIL1-206ENST00000505353 CD2APQ9Y5K6 639 aa12.38□□□□□ -0.43
SIL1-206ENST00000505353 CAMTA2O94983 1202 aa12.37□□□□□ -0.43
SIL1-206ENST00000505353 NFIXQ14938 502 aa12.37□□□□□ -0.43
SIL1-206ENST00000505353 NLGN2Q8NFZ4 835 aa12.37□□□□□ -0.43
SIL1-206ENST00000505353 MBIPQ9NS73 344 aa12.37□□□□□ -0.43
SIL1-206ENST00000505353 LAMB4A4D0S4 1761 aa12.36□□□□□ -0.43
SIL1-206ENST00000505353 GOLGB1Q14789 3259 aaKnown RBP12.36□□□□□ -0.43
SIL1-206ENST00000505353 POLRMTO00411 1230 aaKnown RBP12.36□□□□□ -0.43
SIL1-206ENST00000505353 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
SIL1-206ENST00000505353 TBC1D2BQ9UPU7 963 aa12.36□□□□□ -0.43
SIL1-206ENST00000505353 KIF13BQ9NQT8 1826 aa12.36□□□□□ -0.43
SIL1-206ENST00000505353 A0A087WZG4 1122 aa12.35□□□□□ -0.43
SIL1-206ENST00000505353 SENP3-EIF4A1A0A087X0R7 540 aa12.35□□□□□ -0.43
SIL1-206ENST00000505353 CCER2I3L3R5 266 aa12.35□□□□□ -0.43
SIL1-206ENST00000505353 RGL2O15211 777 aa12.35□□□□□ -0.43
SIL1-206ENST00000505353 ZPR1O75312 459 aa12.35□□□□□ -0.43
SIL1-206ENST00000505353 NRXN2Q9P2S2 1712 aa12.34□□□□□ -0.43
SIL1-206ENST00000505353 PROSER3Q2NL68 480 aa12.34□□□□□ -0.43
SIL1-206ENST00000505353 TBC1D9BQ66K14 1250 aa12.34□□□□□ -0.43
SIL1-206ENST00000505353 DZIP3Q86Y13 1208 aaKnown RBP12.34□□□□□ -0.43
SIL1-206ENST00000505353 FAM9BQ8IZU0 186 aa12.34□□□□□ -0.43
SIL1-206ENST00000505353 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
SIL1-206ENST00000505353 KIAA1551Q9HCM1 1747 aa12.34□□□□□ -0.43
SIL1-206ENST00000505353 SCN7AQ01118 1682 aa12.33□□□□□ -0.44
SIL1-206ENST00000505353 HOXB7P09629 217 aa12.33□□□□□ -0.44
SIL1-206ENST00000505353 KCNA3P22001 575 aa12.33□□□□□ -0.44
SIL1-206ENST00000505353 GNAI1P63096 354 aa12.33□□□□□ -0.44
SIL1-206ENST00000505353 CLEC4GQ6UXB4 293 aa12.33□□□□□ -0.44
SIL1-206ENST00000505353 LAS1LQ9Y4W2 734 aaKnown RBP12.33□□□□□ -0.44
SIL1-206ENST00000505353 C10orf71Q711Q0 1435 aa12.33□□□□□ -0.44
SIL1-206ENST00000505353 IL16Q14005 1332 aa12.33□□□□□ -0.44
SIL1-206ENST00000505353 ZNF521Q96K83 1311 aa12.33□□□□□ -0.44
SIL1-206ENST00000505353 BCORQ6W2J9 1755 aa12.33□□□□□ -0.44
SIL1-206ENST00000505353 CALD1Q05682 793 aaKnown RBP12.32□□□□□ -0.44
SIL1-206ENST00000505353 HLFQ16534 295 aa12.32□□□□□ -0.44
SIL1-206ENST00000505353 DUSP27Q5VZP5 1158 aa12.32□□□□□ -0.44
SIL1-206ENST00000505353 WDR63Q8IWG1 891 aa12.32□□□□□ -0.44
SIL1-206ENST00000505353 C8orf58Q8NAV2 365 aa12.32□□□□□ -0.44
SIL1-206ENST00000505353 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
SIL1-206ENST00000505353 PARP3Q9Y6F1 533 aa12.32□□□□□ -0.44
SIL1-206ENST00000505353 AFDNP55196 1824 aaKnown RBP12.32□□□□□ -0.44
SIL1-206ENST00000505353 ERVV-1B6SEH8 477 aa12.31□□□□□ -0.44
SIL1-206ENST00000505353 TGFB2P61812 414 aa12.31□□□□□ -0.44
SIL1-206ENST00000505353 TTLL7Q6ZT98 887 aa12.31□□□□□ -0.44
SIL1-206ENST00000505353 NGEFQ8N5V2 710 aa12.31□□□□□ -0.44
SIL1-206ENST00000505353 TSPYL6Q8N831 410 aa12.31□□□□□ -0.44
SIL1-206ENST00000505353 PXDNLA1KZ92 1463 aa12.3□□□□□ -0.44
SIL1-206ENST00000505353 ANXA1P04083 346 aa12.3□□□□□ -0.44
SIL1-206ENST00000505353 SERPINB2P05120 415 aa12.3□□□□□ -0.44
SIL1-206ENST00000505353 YBX3P16989 372 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■■■■□ 20.7
SIL1-206ENST00000505353 EIF2S2P20042 333 aaKnown RBP12.3□□□□□ -0.44
SIL1-206ENST00000505353 DIEXFQ68CQ4 756 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms