RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ENOX2Q16206 610 aaKnown RBP4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 BRICD5Q6PL45 260 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 TNS4Q8IZW8 715 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 SRPK1Q96SB4 655 aaKnown RBP4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 TRIM55Q9BYV6 548 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 SPC25Q9HBM1 224 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 ZSWIM6Q9HCJ5 1215 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 PCDH12Q9NPG4 1184 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 EVA1BQ9NVM1 165 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 STIM2Q9P246 746 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 RABGEF1Q9UJ41 708 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 SPG7Q9UQ90 795 aa4.96□□□□□ -1.62
HMGB1P22-201ENST00000505315 POTEFA5A3E0 1075 aa4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 CCDC85CA6NKD9 419 aa4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 BACH1O14867 736 aa4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 PAK2Q13177 524 aa4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 GPR153Q6NV75 609 aa4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 ZBED2Q9BTP6 218 aa4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 PRR14Q9BWN1 585 aa4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 BRINP2Q9C0B6 783 aa4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 SERTAD1Q9UHV2 236 aa4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 POLIQ9UNA4 740 aa4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 R3HCC1Q9Y3T6 440 aaKnown RBP4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 AK5Q9Y6K8 562 aa4.95□□□□□ -1.62
HMGB1P22-201ENST00000505315 NR1I2O75469 434 aa4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 PCSK2P16519 638 aa4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 MZF1P28698 734 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 ATCAYQ86WG3 371 aa4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 SCUBE3Q8IX30 993 aa4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 ABTB2Q8N961 1025 aa4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 PRPF38AQ8NAV1 312 aaKnown RBP4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 GPRASP2Q96D09 838 aa4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 FAM129BQ96TA1 746 aa4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 PRDM16Q9HAZ2 1276 aa4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 MAGEC2Q9UBF1 373 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 GABBR1Q9UBS5 961 aa4.94□□□□□ -1.62
HMGB1P22-201ENST00000505315 ESPNB1AK53 854 aa4.93□□□□□ -1.62
HMGB1P22-201ENST00000505315 FGRP09769 529 aa4.93□□□□□ -1.62
HMGB1P22-201ENST00000505315 ATF4P18848 351 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P22-201ENST00000505315 PSEN2P49810 448 aa4.93□□□□□ -1.62
HMGB1P22-201ENST00000505315 TBCELQ5QJ74 424 aa4.93□□□□□ -1.62
HMGB1P22-201ENST00000505315 CCAR1Q8IX12 1150 aaKnown RBP4.93□□□□□ -1.62
HMGB1P22-201ENST00000505315 NGLY1Q96IV0 654 aa4.93□□□□□ -1.62
HMGB1P22-201ENST00000505315 FRMD6Q96NE9 622 aa4.93□□□□□ -1.62
HMGB1P22-201ENST00000505315 TSPAN10Q9H1Z9 355 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P22-201ENST00000505315 FAN1Q9Y2M0 1017 aa4.93□□□□□ -1.62
HMGB1P22-201ENST00000505315 CHMP3Q9Y3E7 222 aa4.93□□□□□ -1.62
HMGB1P22-201ENST00000505315 CTSHP09668 335 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 HOXB3P14651 431 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 USP5P45974 858 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 PLEKHG6Q3KR16 790 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 C8orf34Q49A92 452 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 TAF7LQ5H9L4 462 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 COX20Q5RI15 118 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 BPHLQ86WA6 291 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 CCDC146Q8IYE0 955 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 NKX2-3Q8TAU0 364 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 FBF1Q8TES7 1133 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 CPLX3Q8WVH0 158 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 EDEM1Q92611 657 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 ALKBH8Q96BT7 664 aaKnown RBP4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 LRCH3Q96II8 777 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 CSRNP1Q96S65 589 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 UNC93B1Q9H1C4 597 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 SRA1Q9HD15 236 aaKnown RBP4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 DDX56Q9NY93 547 aaKnown RBP4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 SALL2Q9Y467 1007 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 PCDHB3Q9Y5E6 796 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 MRVI1Q9Y6F6 885 aa4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 V9GY48 417 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P22-201ENST00000505315 CCDC194A0A1B0GVG4 234 aa4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 CDC45O75419 566 aa4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 NEFLP07196 543 aa4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 NFX1Q12986 1120 aaKnown RBP4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 ORC1Q13415 861 aa4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 LINC01559Q495D7 138 aa4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 SH3BP5LQ7L8J4 393 aa4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 FMNL3Q8IVF7 1028 aa4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 JDP2Q8WYK2 163 aa4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 CEP89Q96ST8 783 aa4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 NBPF3Q9H094 633 aa4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 IRF2BPLQ9H1B7 796 aa4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 BCCIPQ9P287 314 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P22-201ENST00000505315 A0A1W2PRU2 124 aa4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 EIF1AYO14602 144 aaKnown RBP4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 ZBTB39O15060 712 aa4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 NASPP49321 788 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 GDF10P55107 478 aa4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 IRX6P78412 446 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 EVX2Q03828 476 aa4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 TAF1CQ15572 869 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 ERFEQ4G0M1 354 aa4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 NBPF6Q5VWK0 638 aa4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 ANKS3Q6ZW76 656 aa4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 RNPC3Q96LT9 517 aaKnown RBP4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 NBPF4Q96M43 638 aa4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 FANCLQ9NW38 375 aa4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 SIRPGQ9P1W8 387 aa4.9□□□□□ -1.63
HMGB1P22-201ENST00000505315 PRKAB1Q9Y478 270 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms