RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 PANK2Q9BZ23 570 aa11.94□□□□□ -0.5
PDLIM5-207ENST00000503974 CGNQ9P2M7 1197 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-207ENST00000503974 SEPT12Q8IYM1 358 aa11.93□□□□□ -0.5
PDLIM5-207ENST00000503974 ZCRB1Q8TBF4 217 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-207ENST00000503974 CHMP4CQ96CF2 233 aa11.93□□□□□ -0.5
PDLIM5-207ENST00000503974 PCDH11XQ9BZA7 1347 aa11.93□□□□□ -0.5
PDLIM5-207ENST00000503974 PCDH11YQ9BZA8 1340 aa11.93□□□□□ -0.5
PDLIM5-207ENST00000503974 BCL9O00512 1426 aa11.93□□□□□ -0.5
PDLIM5-207ENST00000503974 DDB1Q16531 1140 aa11.93□□□□□ -0.5
PDLIM5-207ENST00000503974 PLEKHO1Q53GL0 409 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-207ENST00000503974 SPG7Q9UQ90 795 aa11.93□□□□□ -0.5
PDLIM5-207ENST00000503974 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-207ENST00000503974 EXOC5O00471 708 aa11.92□□□□□ -0.5
PDLIM5-207ENST00000503974 MTHFSDQ2M296 383 aaKnown RBP11.92□□□□□ -0.5
PDLIM5-207ENST00000503974 NBPF20Q3BBV1 942 aa11.92□□□□□ -0.5
PDLIM5-207ENST00000503974 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.92□□□□□ -0.5
PDLIM5-207ENST00000503974 FAM9BQ8IZU0 186 aa11.92□□□□□ -0.5
PDLIM5-207ENST00000503974 TOGARAM1Q9Y4F4 1720 aa11.92□□□□□ -0.5
PDLIM5-207ENST00000503974 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
PDLIM5-207ENST00000503974 CYP27B1O15528 508 aa11.91□□□□□ -0.5
PDLIM5-207ENST00000503974 GAS2L2Q8NHY3 880 aa11.91□□□□□ -0.5
PDLIM5-207ENST00000503974 DYNC1I1O14576 645 aa11.91□□□□□ -0.5
PDLIM5-207ENST00000503974 PRR29P0C7W0 189 aa11.91□□□□□ -0.5
PDLIM5-207ENST00000503974 MAPK8IP3Q9UPT6 1336 aa11.91□□□□□ -0.5
PDLIM5-207ENST00000503974 ZBED9Q6R2W3 1325 aa11.9□□□□□ -0.5
PDLIM5-207ENST00000503974 PHKG2P15735 406 aa11.9□□□□□ -0.5
PDLIM5-207ENST00000503974 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-207ENST00000503974 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
PDLIM5-207ENST00000503974 DOT1LQ8TEK3 1739 aa11.9□□□□□ -0.5
PDLIM5-207ENST00000503974 MRC1P22897 1456 aa11.9□□□□□ -0.5
PDLIM5-207ENST00000503974 MAP3K5Q99683 1374 aa11.9□□□□□ -0.5
PDLIM5-207ENST00000503974 SLC4A3P48751 1232 aa11.9□□□□□ -0.51
PDLIM5-207ENST00000503974 NFE2L2Q16236 605 aa11.9□□□□□ -0.51
PDLIM5-207ENST00000503974 MARCH10Q8NA82 808 aaPredicted RBP11.9□□□□□ -0.51
PDLIM5-207ENST00000503974 KDM6AO15550 1401 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-207ENST00000503974 SBF2Q86WG5 1849 aa11.89□□□□□ -0.51
PDLIM5-207ENST00000503974 TMPOP42166 694 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-207ENST00000503974 AKAP4Q5JQC9 854 aa11.89□□□□□ -0.51
PDLIM5-207ENST00000503974 ZNF530Q6P9A1 599 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-207ENST00000503974 IFNL2Q8IZJ0 200 aa11.89□□□□□ -0.51
PDLIM5-207ENST00000503974 PSMD1Q99460 953 aa11.89□□□□□ -0.51
PDLIM5-207ENST00000503974 SIPA1L3O60292 1781 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-207ENST00000503974 NHSQ6T4R5 1651 aa11.88□□□□□ -0.51
PDLIM5-207ENST00000503974 SETQ01105 290 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-207ENST00000503974 SH3BP1Q9Y3L3 701 aa11.88□□□□□ -0.51
PDLIM5-207ENST00000503974 A0A0G2JS52 829 aa11.88□□□□□ -0.51
PDLIM5-207ENST00000503974 HTATSF1O43719 755 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-207ENST00000503974 MRE11P49959 708 aa11.88□□□□□ -0.51
PDLIM5-207ENST00000503974 OS9Q13438 667 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-207ENST00000503974 KRT27Q7Z3Y8 459 aa11.88□□□□□ -0.51
PDLIM5-207ENST00000503974 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
PDLIM5-207ENST00000503974 CEMIPQ8WUJ3 1361 aa11.87□□□□□ -0.51
PDLIM5-207ENST00000503974 APAF1O14727 1248 aa11.87□□□□□ -0.51
PDLIM5-207ENST00000503974 HSP90AB1P08238 724 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-207ENST00000503974 PDE3BQ13370 1112 aa11.87□□□□□ -0.51
PDLIM5-207ENST00000503974 ITGB4P16144 1822 aa11.87□□□□□ -0.51
PDLIM5-207ENST00000503974 RNF123Q5XPI4 1314 aa11.87□□□□□ -0.51
PDLIM5-207ENST00000503974 GNAT3A8MTJ3 354 aa11.87□□□□□ -0.51
PDLIM5-207ENST00000503974 IRF6O14896 467 aa11.87□□□□□ -0.51
PDLIM5-207ENST00000503974 KCNJ4P48050 445 aa11.87□□□□□ -0.51
PDLIM5-207ENST00000503974 C1orf141Q5JVX7 400 aa11.87□□□□□ -0.51
PDLIM5-207ENST00000503974 CCDC27Q2M243 656 aa11.86□□□□□ -0.51
PDLIM5-207ENST00000503974 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-207ENST00000503974 DCAF5Q96JK2 942 aa11.86□□□□□ -0.51
PDLIM5-207ENST00000503974 PRDM16Q9HAZ2 1276 aa11.86□□□□□ -0.51
PDLIM5-207ENST00000503974 TRIM35Q9UPQ4 493 aa11.85□□□□□ -0.51
PDLIM5-207ENST00000503974 PAPPAQ13219 1627 aa11.85□□□□□ -0.51
PDLIM5-207ENST00000503974 BANK1Q8NDB2 785 aa11.85□□□□□ -0.51
PDLIM5-207ENST00000503974 UQCRHLA0A096LP55 91 aa11.84□□□□□ -0.51
PDLIM5-207ENST00000503974 RNMTO43148 476 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-207ENST00000503974 UQCRHP07919 91 aa11.84□□□□□ -0.51
PDLIM5-207ENST00000503974 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
PDLIM5-207ENST00000503974 IL17REQ8NFR9 667 aa11.84□□□□□ -0.51
PDLIM5-207ENST00000503974 ZBTB9Q96C00 473 aa11.84□□□□□ -0.51
PDLIM5-207ENST00000503974 RRP7AQ9Y3A4 280 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-207ENST00000503974 TNS1Q9HBL0 1735 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-207ENST00000503974 ZNF521Q96K83 1311 aa11.83□□□□□ -0.52
PDLIM5-207ENST00000503974 LOC102724159A0A0B4J2E5 919 aa11.83□□□□□ -0.52
PDLIM5-207ENST00000503974 ERVV-2B6SEH9 535 aa11.83□□□□□ -0.52
PDLIM5-207ENST00000503974 PWP2Q15269 919 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-207ENST00000503974 HSP90AB3PQ58FF7 597 aa11.83□□□□□ -0.52
PDLIM5-207ENST00000503974 MPRIPQ6WCQ1 1025 aa11.83□□□□□ -0.52
PDLIM5-207ENST00000503974 FAM196AQ6ZSG2 479 aa11.83□□□□□ -0.52
PDLIM5-207ENST00000503974 KDM3BQ7LBC6 1761 aa11.82□□□□□ -0.52
PDLIM5-207ENST00000503974 BTAF1O14981 1849 aa11.82□□□□□ -0.52
PDLIM5-207ENST00000503974 TULP2O00295 520 aa11.82□□□□□ -0.52
PDLIM5-207ENST00000503974 EP400NLQ6ZTU2 488 aa11.82□□□□□ -0.52
PDLIM5-207ENST00000503974 LGR6Q9HBX8 967 aa11.82□□□□□ -0.52
PDLIM5-207ENST00000503974 FAM182BQ5T319 152 aa11.82□□□□□ -0.52
PDLIM5-207ENST00000503974 RTF1Q92541 710 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-207ENST00000503974 EFCC1Q9HA90 598 aa11.82□□□□□ -0.52
PDLIM5-207ENST00000503974 R3HCC1Q9Y3T6 440 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-207ENST00000503974 UBR2Q8IWV8 1755 aa11.81□□□□□ -0.52
PDLIM5-207ENST00000503974 CBX1P83916 185 aa11.81□□□□□ -0.52
PDLIM5-207ENST00000503974 SEMA3FQ13275 785 aa11.81□□□□□ -0.52
PDLIM5-207ENST00000503974 MCM10Q7L590 875 aa11.81□□□□□ -0.52
PDLIM5-207ENST00000503974 RGPD3A6NKT7 1758 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-207ENST00000503974 RGPD4Q7Z3J3 1758 aa11.81□□□□□ -0.52
PDLIM5-207ENST00000503974 DCTN1Q14203 1278 aa11.8□□□□□ -0.52
PDLIM5-207ENST00000503974 NEUROD2Q15784 382 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms