RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 PNPLA7Q6ZV29 1317 aa14.47□□□□□ -0.09
VCAN-205ENST00000503923 PRAMEF22A3QJZ6 481 aa14.47□□□□□ -0.09
VCAN-205ENST00000503923 RPS6KA4O75676 772 aa14.47□□□□□ -0.09
VCAN-205ENST00000503923 SSFA2P28290 1259 aa14.47□□□□□ -0.09
VCAN-205ENST00000503923 RTCBQ9Y3I0 505 aaKnown RBP14.47□□□□□ -0.09
VCAN-205ENST00000503923 ZNF521Q96K83 1311 aa14.46□□□□□ -0.09
VCAN-205ENST00000503923 INTS5Q6P9B9 1019 aaKnown RBP14.46□□□□□ -0.09
VCAN-205ENST00000503923 USP16Q9Y5T5 823 aa14.46□□□□□ -0.09
VCAN-205ENST00000503923 LAMB4A4D0S4 1761 aa14.46□□□□□ -0.09
VCAN-205ENST00000503923 PHF14O94880 888 aa14.45□□□□□ -0.1
VCAN-205ENST00000503923 ADRA2BP18089 450 aa14.45□□□□□ -0.1
VCAN-205ENST00000503923 ZBTB1Q9Y2K1 713 aa14.45□□□□□ -0.1
VCAN-205ENST00000503923 CASZ1Q86V15 1759 aa14.45□□□□□ -0.1
VCAN-205ENST00000503923 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.44□□□□□ -0.1
VCAN-205ENST00000503923 HOXB7P09629 217 aa14.44□□□□□ -0.1
VCAN-205ENST00000503923 CANXP27824 592 aaKnown RBP14.44□□□□□ -0.1
VCAN-205ENST00000503923 TRAPPC3LQ5T215 181 aa14.44□□□□□ -0.1
VCAN-205ENST00000503923 AMIGO3Q86WK7 504 aa14.44□□□□□ -0.1
VCAN-205ENST00000503923 COL23A1Q86Y22 540 aaPredicted RBP14.44□□□□□ -0.1
VCAN-205ENST00000503923 TSR2Q969E8 191 aaKnown RBP14.44□□□□□ -0.1
VCAN-205ENST00000503923 SOS1Q07889 1333 aaPredicted RBP14.43□□□□□ -0.1
VCAN-205ENST00000503923 MSH5O43196 834 aa14.43□□□□□ -0.1
VCAN-205ENST00000503923 A1BGP04217 495 aa14.43□□□□□ -0.1
VCAN-205ENST00000503923 GOLGA2Q08379 1002 aa14.43□□□□□ -0.1
VCAN-205ENST00000503923 KRT24Q2M2I5 525 aa14.43□□□□□ -0.1
VCAN-205ENST00000503923 SLC16A10Q8TF71 515 aa14.43□□□□□ -0.1
VCAN-205ENST00000503923 PDGFDQ9GZP0 370 aaPredicted RBP14.43□□□□□ -0.1
VCAN-205ENST00000503923 MYH16Q9H6N6 1097 aa14.43□□□□□ -0.1
VCAN-205ENST00000503923 FANCIQ9NVI1 1328 aa14.42□□□□□ -0.1
VCAN-205ENST00000503923 IL6STP40189 918 aaPredicted RBP14.42□□□□□ -0.1
VCAN-205ENST00000503923 HNRNPUQ00839 825 aaKnown RBP eCLIP14.42□□□□□ -0.1
VCAN-205ENST00000503923 DUSP27Q5VZP5 1158 aa14.42□□□□□ -0.1
VCAN-205ENST00000503923 SMIM5Q71RC9 77 aa14.42□□□□□ -0.1
VCAN-205ENST00000503923 ARHGEF1Q92888 912 aaKnown RBP14.42□□□□□ -0.1
VCAN-205ENST00000503923 ERBB4Q15303 1308 aa14.41□□□□□ -0.1
VCAN-205ENST00000503923 EIF2S2P20042 333 aaKnown RBP14.41□□□□□ -0.1
VCAN-205ENST00000503923 RFC4P35249 363 aa14.41□□□□□ -0.1
VCAN-205ENST00000503923 EIF5P55010 431 aaKnown RBP14.41□□□□□ -0.1
VCAN-205ENST00000503923 NPM2Q86SE8 214 aaKnown RBP14.41□□□□□ -0.1
VCAN-205ENST00000503923 SPINK5Q9NQ38 1064 aaPredicted RBP14.41□□□□□ -0.1
VCAN-205ENST00000503923 COL15A1P39059 1388 aa14.41□□□□□ -0.1
VCAN-205ENST00000503923 A0A087WZG4 1122 aa14.4□□□□□ -0.1
VCAN-205ENST00000503923 E9PSI1 815 aa14.4□□□□□ -0.1
VCAN-205ENST00000503923 C8orf58Q8NAV2 365 aa14.4□□□□□ -0.1
VCAN-205ENST00000503923 CHMP4AQ9BY43 222 aa14.4□□□□□ -0.1
VCAN-205ENST00000503923 MTFR1LQ9H019 292 aa14.4□□□□□ -0.1
VCAN-205ENST00000503923 C4AP0C0L4 1744 aa14.39□□□□□ -0.11
VCAN-205ENST00000503923 NBPF26B4DH59 902 aa14.39□□□□□ -0.11
VCAN-205ENST00000503923 ELL2O00472 640 aaPredicted RBP14.39□□□□□ -0.11
VCAN-205ENST00000503923 ZBTB7AO95365 584 aa14.39□□□□□ -0.11
VCAN-205ENST00000503923 PIP4K2AP48426 406 aaPredicted RBP14.39□□□□□ -0.11
VCAN-205ENST00000503923 HDGFL1Q5TGJ6 251 aa14.39□□□□□ -0.11
VCAN-205ENST00000503923 NBPF10Q6P3W6 841 aaKnown RBP14.39□□□□□ -0.11
VCAN-205ENST00000503923 NBPF15Q8N660 670 aa14.39□□□□□ -0.11
VCAN-205ENST00000503923 ZNF330Q9Y3S2 320 aaPredicted RBP14.39□□□□□ -0.11
VCAN-205ENST00000503923 SLFN5Q08AF3 891 aa14.38□□□□□ -0.11
VCAN-205ENST00000503923 TWISTNBQ3B726 338 aaPredicted RBP14.38□□□□□ -0.11
VCAN-205ENST00000503923 SPON1Q9HCB6 807 aa14.38□□□□□ -0.11
VCAN-205ENST00000503923 ZPR1O75312 459 aa14.37□□□□□ -0.11
VCAN-205ENST00000503923 EXOSC9Q06265 439 aaKnown RBP14.37□□□□□ -0.11
VCAN-205ENST00000503923 TSPYL6Q8N831 410 aa14.37□□□□□ -0.11
VCAN-205ENST00000503923 NECTIN2Q92692 538 aa14.37□□□□□ -0.11
VCAN-205ENST00000503923 NARFQ9UHQ1 456 aa14.37□□□□□ -0.11
VCAN-205ENST00000503923 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
VCAN-205ENST00000503923 USP42Q9H9J4 1324 aaKnown RBP14.37□□□□□ -0.11
VCAN-205ENST00000503923 MYL6BP14649 208 aa14.36□□□□□ -0.11
VCAN-205ENST00000503923 PDIA6Q15084 440 aa14.36□□□□□ -0.11
VCAN-205ENST00000503923 CDCA7LQ96GN5 454 aa14.36□□□□□ -0.11
VCAN-205ENST00000503923 ARXQ96QS3 562 aa14.36□□□□□ -0.11
VCAN-205ENST00000503923 DDX21Q9NR30 783 aaKnown RBP eCLIP14.36□□□□□ -0.11
VCAN-205ENST00000503923 DBF4Q9UBU7 674 aaPredicted RBP14.36□□□□□ -0.11
VCAN-205ENST00000503923 SRP68Q9UHB9 627 aaKnown RBP14.36□□□□□ -0.11
VCAN-205ENST00000503923 ZBED9Q6R2W3 1325 aa14.36□□□□□ -0.11
VCAN-205ENST00000503923 COL24A1Q17RW2 1714 aa14.35□□□□□ -0.11
VCAN-205ENST00000503923 GYS1P13807 737 aa14.35□□□□□ -0.11
VCAN-205ENST00000503923 CCDC30Q5VVM6 783 aa14.35□□□□□ -0.11
VCAN-205ENST00000503923 USPL1Q5W0Q7 1092 aa14.35□□□□□ -0.11
VCAN-205ENST00000503923 DZIP3Q86Y13 1208 aaKnown RBP14.35□□□□□ -0.11
VCAN-205ENST00000503923 TRMT2AQ8IZ69 625 aaKnown RBP14.35□□□□□ -0.11
VCAN-205ENST00000503923 NLGN1Q8N2Q7 840 aa14.35□□□□□ -0.11
VCAN-205ENST00000503923 CHPF2Q9P2E5 772 aa14.35□□□□□ -0.11
VCAN-205ENST00000503923 TBC1D2BQ9UPU7 963 aa14.35□□□□□ -0.11
VCAN-205ENST00000503923 LRP5O75197 1615 aa14.34□□□□□ -0.11
VCAN-205ENST00000503923 VAMP4O75379 141 aa14.34□□□□□ -0.11
VCAN-205ENST00000503923 POLD1P28340 1107 aa14.34□□□□□ -0.11
VCAN-205ENST00000503923 PROSER3Q2NL68 480 aa14.34□□□□□ -0.11
VCAN-205ENST00000503923 MSL1Q68DK7 614 aa14.34□□□□□ -0.11
VCAN-205ENST00000503923 SCN7AQ01118 1682 aa14.33□□□□□ -0.11
VCAN-205ENST00000503923 ANXA1P04083 346 aa14.33□□□□□ -0.12
VCAN-205ENST00000503923 PTGER2P43116 358 aa14.33□□□□□ -0.12
VCAN-205ENST00000503923 KIF6Q6ZMV9 814 aa14.33□□□□□ -0.12
VCAN-205ENST00000503923 LRP10Q7Z4F1 713 aa14.33□□□□□ -0.12
VCAN-205ENST00000503923 SGIP1Q9BQI5 828 aa14.33□□□□□ -0.12
VCAN-205ENST00000503923 HYPKQ9NX55 129 aa14.33□□□□□ -0.12
VCAN-205ENST00000503923 BCORQ6W2J9 1755 aa14.32□□□□□ -0.12
VCAN-205ENST00000503923 RGL2O15211 777 aa14.32□□□□□ -0.12
VCAN-205ENST00000503923 CAMTA2O94983 1202 aa14.32□□□□□ -0.12
VCAN-205ENST00000503923 FKBP8Q14318 412 aa14.32□□□□□ -0.12
VCAN-205ENST00000503923 STK31Q9BXU1 1019 aa14.32□□□□□ -0.12
VCAN-205ENST00000503923 BCL2L12Q9HB09 334 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms