RNA–Protein interactions for RNA: ENST00000503670.5

DDR1-251, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-251ENST00000503670 CCDC87Q9NVE4 849 aa11.57□□□□□ -0.56
DDR1-251ENST00000503670 TFCP2L1Q9NZI6 479 aa11.57□□□□□ -0.56
DDR1-251ENST00000503670 FANCIQ9NVI1 1328 aa11.57□□□□□ -0.56
DDR1-251ENST00000503670 PRAMEF22A3QJZ6 481 aa11.56□□□□□ -0.56
DDR1-251ENST00000503670 HOXB7P09629 217 aa11.56□□□□□ -0.56
DDR1-251ENST00000503670 ZNF827Q17R98 1081 aa11.56□□□□□ -0.56
DDR1-251ENST00000503670 SPINK5Q9NQ38 1064 aaPredicted RBP11.56□□□□□ -0.56
DDR1-251ENST00000503670 USP16Q9Y5T5 823 aa11.56□□□□□ -0.56
DDR1-251ENST00000503670 ZBED9Q6R2W3 1325 aa11.56□□□□□ -0.56
DDR1-251ENST00000503670 GNPATO15228 680 aa11.55□□□□□ -0.56
DDR1-251ENST00000503670 SLFN5Q08AF3 891 aa11.55□□□□□ -0.56
DDR1-251ENST00000503670 KRT24Q2M2I5 525 aa11.55□□□□□ -0.56
DDR1-251ENST00000503670 DUSP27Q5VZP5 1158 aa11.55□□□□□ -0.56
DDR1-251ENST00000503670 INTS5Q6P9B9 1019 aaKnown RBP11.55□□□□□ -0.56
DDR1-251ENST00000503670 CHMP4AQ9BY43 222 aa11.55□□□□□ -0.56
DDR1-251ENST00000503670 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
DDR1-251ENST00000503670 RPS6KA4O75676 772 aa11.54□□□□□ -0.56
DDR1-251ENST00000503670 R3HDM1Q15032 1099 aaKnown RBP11.54□□□□□ -0.56
DDR1-251ENST00000503670 C8orf58Q8NAV2 365 aa11.54□□□□□ -0.56
DDR1-251ENST00000503670 FLAD1Q8NFF5 587 aa11.54□□□□□ -0.56
DDR1-251ENST00000503670 CDCA7LQ96GN5 454 aa11.54□□□□□ -0.56
DDR1-251ENST00000503670 RTCBQ9Y3I0 505 aaKnown RBP11.54□□□□□ -0.56
DDR1-251ENST00000503670 PSDA5PKW4 1024 aaPredicted RBP11.53□□□□□ -0.56
DDR1-251ENST00000503670 ELL2O00472 640 aaPredicted RBP11.53□□□□□ -0.56
DDR1-251ENST00000503670 A1BGP04217 495 aa11.53□□□□□ -0.56
DDR1-251ENST00000503670 ADRA2BP18089 450 aa11.53□□□□□ -0.56
DDR1-251ENST00000503670 EIF2S2P20042 333 aaKnown RBP11.53□□□□□ -0.56
DDR1-251ENST00000503670 CANXP27824 592 aaKnown RBP11.53□□□□□ -0.56
DDR1-251ENST00000503670 SSFA2P28290 1259 aa11.53□□□□□ -0.56
DDR1-251ENST00000503670 EXOSC9Q06265 439 aaKnown RBP11.53□□□□□ -0.56
DDR1-251ENST00000503670 ZBTB1Q9Y2K1 713 aa11.53□□□□□ -0.56
DDR1-251ENST00000503670 ERBB4Q15303 1308 aa11.53□□□□□ -0.56
DDR1-251ENST00000503670 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.52□□□□□ -0.57
DDR1-251ENST00000503670 MSH5O43196 834 aa11.52□□□□□ -0.57
DDR1-251ENST00000503670 PHF14O94880 888 aa11.52□□□□□ -0.57
DDR1-251ENST00000503670 IL6STP40189 918 aaPredicted RBP11.52□□□□□ -0.57
DDR1-251ENST00000503670 TWISTNBQ3B726 338 aaPredicted RBP11.52□□□□□ -0.57
DDR1-251ENST00000503670 TRAPPC3LQ5T215 181 aa11.52□□□□□ -0.57
DDR1-251ENST00000503670 HDGFL1Q5TGJ6 251 aa11.52□□□□□ -0.57
DDR1-251ENST00000503670 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
DDR1-251ENST00000503670 TRMT2AQ8IZ69 625 aaKnown RBP11.52□□□□□ -0.57
DDR1-251ENST00000503670 TSPYL6Q8N831 410 aa11.52□□□□□ -0.57
DDR1-251ENST00000503670 PNPLA7Q6ZV29 1317 aa11.52□□□□□ -0.57
DDR1-251ENST00000503670 CACNA1FO60840 1977 aa11.52□□□□□ -0.57
DDR1-251ENST00000503670 C4AP0C0L4 1744 aa11.52□□□□□ -0.57
DDR1-251ENST00000503670 CASZ1Q86V15 1759 aa11.51□□□□□ -0.57
DDR1-251ENST00000503670 EIF5P55010 431 aaKnown RBP11.51□□□□□ -0.57
DDR1-251ENST00000503670 NECTIN2Q92692 538 aa11.51□□□□□ -0.57
DDR1-251ENST00000503670 COL15A1P39059 1388 aa11.51□□□□□ -0.57
DDR1-251ENST00000503670 A0A087WZG4 1122 aa11.5□□□□□ -0.57
DDR1-251ENST00000503670 NBPF26B4DH59 902 aa11.5□□□□□ -0.57
DDR1-251ENST00000503670 RFC4P35249 363 aa11.5□□□□□ -0.57
DDR1-251ENST00000503670 PIP4K2AP48426 406 aaPredicted RBP11.5□□□□□ -0.57
DDR1-251ENST00000503670 CCDC30Q5VVM6 783 aa11.5□□□□□ -0.57
DDR1-251ENST00000503670 NBPF10Q6P3W6 841 aaKnown RBP11.5□□□□□ -0.57
DDR1-251ENST00000503670 SMIM5Q71RC9 77 aa11.5□□□□□ -0.57
DDR1-251ENST00000503670 AMIGO3Q86WK7 504 aa11.5□□□□□ -0.57
DDR1-251ENST00000503670 COL23A1Q86Y22 540 aaPredicted RBP11.5□□□□□ -0.57
DDR1-251ENST00000503670 NBPF15Q8N660 670 aa11.5□□□□□ -0.57
DDR1-251ENST00000503670 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
DDR1-251ENST00000503670 YTHDC1Q96MU7 727 aaKnown RBP11.5□□□□□ -0.57
DDR1-251ENST00000503670 DBF4Q9UBU7 674 aaPredicted RBP11.5□□□□□ -0.57
DDR1-251ENST00000503670 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
DDR1-251ENST00000503670 VAMP4O75379 141 aa11.49□□□□□ -0.57
DDR1-251ENST00000503670 MYL6BP14649 208 aa11.49□□□□□ -0.57
DDR1-251ENST00000503670 SLC16A10Q8TF71 515 aa11.49□□□□□ -0.57
DDR1-251ENST00000503670 STK31Q9BXU1 1019 aa11.49□□□□□ -0.57
DDR1-251ENST00000503670 DDX21Q9NR30 783 aaKnown RBP eCLIP11.49□□□□□ -0.57
DDR1-251ENST00000503670 CHPF2Q9P2E5 772 aa11.49□□□□□ -0.57
DDR1-251ENST00000503670 ZPR1O75312 459 aa11.48□□□□□ -0.57
DDR1-251ENST00000503670 PDIA6Q15084 440 aa11.48□□□□□ -0.57
DDR1-251ENST00000503670 ARXQ96QS3 562 aa11.48□□□□□ -0.57
DDR1-251ENST00000503670 PDGFDQ9GZP0 370 aaPredicted RBP11.48□□□□□ -0.57
DDR1-251ENST00000503670 HYPKQ9NX55 129 aa11.48□□□□□ -0.57
DDR1-251ENST00000503670 BCORQ6W2J9 1755 aa11.47□□□□□ -0.57
DDR1-251ENST00000503670 SCN7AQ01118 1682 aa11.47□□□□□ -0.57
DDR1-251ENST00000503670 CT47B1P0C2W7 299 aaPredicted RBP11.47□□□□□ -0.57
DDR1-251ENST00000503670 PROSER3Q2NL68 480 aa11.47□□□□□ -0.57
DDR1-251ENST00000503670 DZIP3Q86Y13 1208 aaKnown RBP11.47□□□□□ -0.57
DDR1-251ENST00000503670 ZNF428Q96B54 188 aa11.47□□□□□ -0.57
DDR1-251ENST00000503670 NARFQ9UHQ1 456 aa11.47□□□□□ -0.57
DDR1-251ENST00000503670 USP42Q9H9J4 1324 aaKnown RBP11.46□□□□□ -0.57
DDR1-251ENST00000503670 ANXA1P04083 346 aa11.46□□□□□ -0.57
DDR1-251ENST00000503670 KIF6Q6ZMV9 814 aa11.46□□□□□ -0.57
DDR1-251ENST00000503670 MTFR1LQ9H019 292 aa11.46□□□□□ -0.57
DDR1-251ENST00000503670 TBC1D2BQ9UPU7 963 aa11.46□□□□□ -0.57
DDR1-251ENST00000503670 NUP98P52948 1817 aa11.46□□□□□ -0.58
DDR1-251ENST00000503670 COL24A1Q17RW2 1714 aa11.46□□□□□ -0.58
DDR1-251ENST00000503670 ZBTB7AO95365 584 aa11.45□□□□□ -0.58
DDR1-251ENST00000503670 SLC4A2P04920 1241 aa11.45□□□□□ -0.58
DDR1-251ENST00000503670 USPL1Q5W0Q7 1092 aa11.45□□□□□ -0.58
DDR1-251ENST00000503670 COPS6Q7L5N1 327 aa11.45□□□□□ -0.58
DDR1-251ENST00000503670 LRP10Q7Z4F1 713 aa11.45□□□□□ -0.58
DDR1-251ENST00000503670 SRP68Q9UHB9 627 aaKnown RBP11.45□□□□□ -0.58
DDR1-251ENST00000503670 ERVV-1B6SEH8 477 aa11.44□□□□□ -0.58
DDR1-251ENST00000503670 TCERG1O14776 1098 aaKnown RBP11.44□□□□□ -0.58
DDR1-251ENST00000503670 RGL2O15211 777 aa11.44□□□□□ -0.58
DDR1-251ENST00000503670 CAMTA2O94983 1202 aa11.44□□□□□ -0.58
DDR1-251ENST00000503670 GYS1P13807 737 aa11.44□□□□□ -0.58
DDR1-251ENST00000503670 AIMP1Q12904 312 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms