RNA–Protein interactions for RNA: ENST00000499045.2

CHFR-206, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 505 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-206ENST00000499045 MIS18AQ9NYP9 233 aa33.28■■■□□ 2.92
CHFR-206ENST00000499045 ZBTB1Q9Y2K1 713 aa33.28■■■□□ 2.92
CHFR-206ENST00000499045 SOS1Q07889 1333 aaPredicted RBP33.28■■■□□ 2.92
CHFR-206ENST00000499045 STARD3NLO95772 234 aa33.27■■■□□ 2.92
CHFR-206ENST00000499045 FHDC1Q9C0D6 1143 aaPredicted RBP33.27■■■□□ 2.92
CHFR-206ENST00000499045 RFC4P35249 363 aa33.25■■■□□ 2.91
CHFR-206ENST00000499045 SYT17Q9BSW7 474 aa33.25■■■□□ 2.91
CHFR-206ENST00000499045 TRIM35Q9UPQ4 493 aa33.24■■■□□ 2.91
CHFR-206ENST00000499045 NEUROD2Q15784 382 aa33.23■■■□□ 2.91
CHFR-206ENST00000499045 MRS2Q9HD23 443 aa33.23■■■□□ 2.91
CHFR-206ENST00000499045 SNRPA1P09661 255 aaKnown RBP33.22■■■□□ 2.91
CHFR-206ENST00000499045 GYS1P13807 737 aa33.22■■■□□ 2.91
CHFR-206ENST00000499045 PRAMEF22A3QJZ6 481 aa33.21■■■□□ 2.91
CHFR-206ENST00000499045 USP16Q9Y5T5 823 aa33.21■■■□□ 2.91
CHFR-206ENST00000499045 NLGN1Q8N2Q7 840 aa33.2■■■□□ 2.91
CHFR-206ENST00000499045 USP42Q9H9J4 1324 aaKnown RBP33.2■■■□□ 2.91
CHFR-206ENST00000499045 APAF1O14727 1248 aa33.19■■■□□ 2.9
CHFR-206ENST00000499045 CANXP27824 592 aaKnown RBP33.19■■■□□ 2.9
CHFR-206ENST00000499045 EIF5P55010 431 aaKnown RBP33.19■■■□□ 2.9
CHFR-206ENST00000499045 SRP68Q9UHB9 627 aaKnown RBP33.19■■■□□ 2.9
CHFR-206ENST00000499045 COL15A1P39059 1388 aa33.19■■■□□ 2.9
CHFR-206ENST00000499045 EIF4A1P60842 406 aaKnown RBP33.18■■■□□ 2.9
CHFR-206ENST00000499045 BABAM1Q9NWV8 329 aa33.18■■■□□ 2.9
CHFR-206ENST00000499045 A1BGP04217 495 aa33.17■■■□□ 2.9
CHFR-206ENST00000499045 MMP10P09238 476 aa33.14■■■□□ 2.9
CHFR-206ENST00000499045 IL6STP40189 918 aaPredicted RBP33.14■■■□□ 2.9
CHFR-206ENST00000499045 NARFQ9UHQ1 456 aa33.14■■■□□ 2.9
CHFR-206ENST00000499045 TSPYL4Q9UJ04 414 aa33.14■■■□□ 2.9
CHFR-206ENST00000499045 GIGYF1O75420 1035 aaPredicted RBP33.13■■■□□ 2.89
CHFR-206ENST00000499045 LAMB4A4D0S4 1761 aa33.13■■■□□ 2.89
CHFR-206ENST00000499045 FKBP8Q14318 412 aa33.12■■■□□ 2.89
CHFR-206ENST00000499045 ZPR1O75312 459 aa33.11■■■□□ 2.89
CHFR-206ENST00000499045 CHL1O00533 1208 aa33.1■■■□□ 2.89
CHFR-206ENST00000499045 USPL1Q5W0Q7 1092 aa33.1■■■□□ 2.89
CHFR-206ENST00000499045 KLHL34Q8N239 644 aa33.1■■■□□ 2.89
CHFR-206ENST00000499045 CD2APQ9Y5K6 639 aa33.1■■■□□ 2.89
CHFR-206ENST00000499045 A0A087WZG4 1122 aa33.09■■■□□ 2.89
CHFR-206ENST00000499045 BCL2L12Q9HB09 334 aa33.09■■■□□ 2.89
CHFR-206ENST00000499045 NLGN2Q8NFZ4 835 aa33.07■■■□□ 2.88
CHFR-206ENST00000499045 NBPF26B4DH59 902 aa33.06■■■□□ 2.88
CHFR-206ENST00000499045 PIP4K2AP48426 406 aaPredicted RBP33.06■■■□□ 2.88
CHFR-206ENST00000499045 NBPF10Q6P3W6 841 aaKnown RBP33.06■■■□□ 2.88
CHFR-206ENST00000499045 NBPF15Q8N660 670 aa33.06■■■□□ 2.88
CHFR-206ENST00000499045 TM4SF1P30408 202 aa33.05■■■□□ 2.88
CHFR-206ENST00000499045 ZNF330Q9Y3S2 320 aaPredicted RBP33.04■■■□□ 2.88
CHFR-206ENST00000499045 DDR1Q08345 913 aa33.03■■■□□ 2.88
CHFR-206ENST00000499045 PARP3Q9Y6F1 533 aa33.03■■■□□ 2.88
CHFR-206ENST00000499045 SCN7AQ01118 1682 aa33.03■■■□□ 2.88
CHFR-206ENST00000499045 CFAP44Q96MT7 982 aa33.02■■■□□ 2.88
CHFR-206ENST00000499045 TBC1D2BQ9UPU7 963 aa33.02■■■□□ 2.88
CHFR-206ENST00000499045 KIF13BQ9NQT8 1826 aa33.02■■■□□ 2.88
CHFR-206ENST00000499045 ZNF853P0CG23 659 aa33.01■■■□□ 2.87
CHFR-206ENST00000499045 LAS1LQ9Y4W2 734 aaKnown RBP33.01■■■□□ 2.87
CHFR-206ENST00000499045 NFIXQ14938 502 aa33■■■□□ 2.87
CHFR-206ENST00000499045 NCBP3Q53F19 620 aaKnown RBP33■■■□□ 2.87
CHFR-206ENST00000499045 C10orf71Q711Q0 1435 aa33■■■□□ 2.87
CHFR-206ENST00000499045 POLRMTO00411 1230 aaKnown RBP32.99■■■□□ 2.87
CHFR-206ENST00000499045 CAMTA2O94983 1202 aa32.99■■■□□ 2.87
CHFR-206ENST00000499045 CCDC27Q2M243 656 aa32.99■■■□□ 2.87
CHFR-206ENST00000499045 CALD1Q05682 793 aaKnown RBP32.98■■■□□ 2.87
CHFR-206ENST00000499045 NPM2Q86SE8 214 aaKnown RBP32.98■■■□□ 2.87
CHFR-206ENST00000499045 DZIP3Q86Y13 1208 aaKnown RBP32.98■■■□□ 2.87
CHFR-206ENST00000499045 BCORQ6W2J9 1755 aa32.98■■■□□ 2.87
CHFR-206ENST00000499045 IFT57Q9NWB7 429 aa32.97■■■□□ 2.87
CHFR-206ENST00000499045 DCAF8L1A6NGE4 600 aa32.96■■■□□ 2.87
CHFR-206ENST00000499045 ERBB4Q15303 1308 aa32.96■■■□□ 2.87
CHFR-206ENST00000499045 KRT24Q2M2I5 525 aa32.95■■■□□ 2.87
CHFR-206ENST00000499045 MBIPQ9NS73 344 aa32.95■■■□□ 2.87
CHFR-206ENST00000499045 SENP3-EIF4A1A0A087X0R7 540 aa32.94■■■□□ 2.86
CHFR-206ENST00000499045 FAM9BQ8IZU0 186 aa32.94■■■□□ 2.86
CHFR-206ENST00000499045 KIAA1551Q9HCM1 1747 aa32.94■■■□□ 2.86
CHFR-206ENST00000499045 NRXN2Q9P2S2 1712 aa32.94■■■□□ 2.86
CHFR-206ENST00000499045 GNAI1P63096 354 aa32.93■■■□□ 2.86
CHFR-206ENST00000499045 WWC1Q8IX03 1113 aa32.93■■■□□ 2.86
CHFR-206ENST00000499045 AFDNP55196 1824 aaKnown RBP32.93■■■□□ 2.86
CHFR-206ENST00000499045 TBC1D9BQ66K14 1250 aa32.92■■■□□ 2.86
CHFR-206ENST00000499045 RGL2O15211 777 aa32.91■■■□□ 2.86
CHFR-206ENST00000499045 PDIA6Q15084 440 aa32.9■■■□□ 2.86
CHFR-206ENST00000499045 PXDNLA1KZ92 1463 aa32.9■■■□□ 2.86
CHFR-206ENST00000499045 HOXB7P09629 217 aa32.89■■■□□ 2.86
CHFR-206ENST00000499045 EIF2S2P20042 333 aaKnown RBP32.89■■■□□ 2.86
CHFR-206ENST00000499045 TGFB2P61812 414 aa32.89■■■□□ 2.86
CHFR-206ENST00000499045 CLEC4GQ6UXB4 293 aa32.89■■■□□ 2.86
CHFR-206ENST00000499045 LRP10Q7Z4F1 713 aa32.89■■■□□ 2.86
CHFR-206ENST00000499045 SERPINB2P05120 415 aa32.88■■■□□ 2.85
CHFR-206ENST00000499045 BICDL1Q6ZP65 573 aa32.88■■■□□ 2.85
CHFR-206ENST00000499045 MYL6BP14649 208 aa32.87■■■□□ 2.85
CHFR-206ENST00000499045 GPR162Q16538 588 aa32.87■■■□□ 2.85
CHFR-206ENST00000499045 NGEFQ8N5V2 710 aa32.85■■■□□ 2.85
CHFR-206ENST00000499045 ZNF652Q9Y2D9 606 aa32.85■■■□□ 2.85
CHFR-206ENST00000499045 N4BP2Q86UW6 1770 aaPredicted RBP32.85■■■□□ 2.85
CHFR-206ENST00000499045 UTRNP46939 3433 aa32.84■■■□□ 2.85
CHFR-206ENST00000499045 IL16Q14005 1332 aa32.84■■■□□ 2.85
CHFR-206ENST00000499045 CCER2I3L3R5 266 aa32.84■■■□□ 2.85
CHFR-206ENST00000499045 YBX3P16989 372 aaKnown RBP eCLIP32.84■■■□□ 2.85
CHFR-206ENST00000499045 PROSER3Q2NL68 480 aa32.84■■■□□ 2.85
CHFR-206ENST00000499045 DUSP27Q5VZP5 1158 aa32.84■■■□□ 2.85
CHFR-206ENST00000499045 TTLL7Q6ZT98 887 aa32.84■■■□□ 2.85
CHFR-206ENST00000499045 CARMIL3Q8ND23 1372 aa32.83■■■□□ 2.85
CHFR-206ENST00000499045 HLFQ16534 295 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms