RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 CCDC87Q9NVE4 849 aa19.41■□□□□ 0.7
HPS1-214ENST00000498219 KDM3BQ7LBC6 1761 aa19.41■□□□□ 0.7
HPS1-214ENST00000498219 PRAMEF22A3QJZ6 481 aa19.4■□□□□ 0.7
HPS1-214ENST00000498219 PNISRQ8TF01 805 aaKnown RBP19.4■□□□□ 0.7
HPS1-214ENST00000498219 ZBTB1Q9Y2K1 713 aa19.4■□□□□ 0.7
HPS1-214ENST00000498219 SRP68Q9UHB9 627 aaKnown RBP19.39■□□□□ 0.69
HPS1-214ENST00000498219 CANXP27824 592 aaKnown RBP19.38■□□□□ 0.69
HPS1-214ENST00000498219 RFC4P35249 363 aa19.38■□□□□ 0.69
HPS1-214ENST00000498219 SYT17Q9BSW7 474 aa19.38■□□□□ 0.69
HPS1-214ENST00000498219 SOS1Q07889 1333 aaPredicted RBP19.37■□□□□ 0.69
HPS1-214ENST00000498219 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
HPS1-214ENST00000498219 ADRA2BP18089 450 aa19.37■□□□□ 0.69
HPS1-214ENST00000498219 MIER1Q8N108 512 aa19.37■□□□□ 0.69
HPS1-214ENST00000498219 STARD3NLO95772 234 aa19.36■□□□□ 0.69
HPS1-214ENST00000498219 USP16Q9Y5T5 823 aa19.36■□□□□ 0.69
HPS1-214ENST00000498219 A1BGP04217 495 aa19.35■□□□□ 0.69
HPS1-214ENST00000498219 GYS1P13807 737 aa19.35■□□□□ 0.69
HPS1-214ENST00000498219 PIP4K2AP48426 406 aaPredicted RBP19.35■□□□□ 0.69
HPS1-214ENST00000498219 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
HPS1-214ENST00000498219 COL15A1P39059 1388 aa19.34■□□□□ 0.69
HPS1-214ENST00000498219 TEX13AQ9BXU3 409 aaPredicted RBP19.34■□□□□ 0.69
HPS1-214ENST00000498219 ZNF330Q9Y3S2 320 aaPredicted RBP19.34■□□□□ 0.69
HPS1-214ENST00000498219 USP42Q9H9J4 1324 aaKnown RBP19.33■□□□□ 0.69
HPS1-214ENST00000498219 APAF1O14727 1248 aa19.33■□□□□ 0.68
HPS1-214ENST00000498219 MMP10P09238 476 aa19.33■□□□□ 0.68
HPS1-214ENST00000498219 LMOD3Q0VAK6 560 aa19.33■□□□□ 0.68
HPS1-214ENST00000498219 FAM9BQ8IZU0 186 aa19.33■□□□□ 0.68
HPS1-214ENST00000498219 NLGN2Q8NFZ4 835 aa19.33■□□□□ 0.68
HPS1-214ENST00000498219 SNRPA1P09661 255 aaKnown RBP19.32■□□□□ 0.68
HPS1-214ENST00000498219 FKBP8Q14318 412 aa19.32■□□□□ 0.68
HPS1-214ENST00000498219 USPL1Q5W0Q7 1092 aa19.32■□□□□ 0.68
HPS1-214ENST00000498219 LAMB4A4D0S4 1761 aa19.32■□□□□ 0.68
HPS1-214ENST00000498219 EIF4A1P60842 406 aaKnown RBP19.31■□□□□ 0.68
HPS1-214ENST00000498219 TSPYL4Q9UJ04 414 aa19.31■□□□□ 0.68
HPS1-214ENST00000498219 LAS1LQ9Y4W2 734 aaKnown RBP19.31■□□□□ 0.68
HPS1-214ENST00000498219 ZPR1O75312 459 aa19.3■□□□□ 0.68
HPS1-214ENST00000498219 EIF5P55010 431 aaKnown RBP19.3■□□□□ 0.68
HPS1-214ENST00000498219 NLGN1Q8N2Q7 840 aa19.3■□□□□ 0.68
HPS1-214ENST00000498219 CCER2I3L3R5 266 aa19.29■□□□□ 0.68
HPS1-214ENST00000498219 NARFQ9UHQ1 456 aa19.29■□□□□ 0.68
HPS1-214ENST00000498219 BCL2L12Q9HB09 334 aa19.28■□□□□ 0.68
HPS1-214ENST00000498219 TBC1D2BQ9UPU7 963 aa19.28■□□□□ 0.68
HPS1-214ENST00000498219 NBPF26B4DH59 902 aa19.27■□□□□ 0.68
HPS1-214ENST00000498219 GIGYF1O75420 1035 aaPredicted RBP19.27■□□□□ 0.68
HPS1-214ENST00000498219 DDR1Q08345 913 aa19.27■□□□□ 0.68
HPS1-214ENST00000498219 NBPF10Q6P3W6 841 aaKnown RBP19.27■□□□□ 0.68
HPS1-214ENST00000498219 NBPF15Q8N660 670 aa19.27■□□□□ 0.68
HPS1-214ENST00000498219 IL6STP40189 918 aaPredicted RBP19.26■□□□□ 0.67
HPS1-214ENST00000498219 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
HPS1-214ENST00000498219 PARP3Q9Y6F1 533 aa19.26■□□□□ 0.67
HPS1-214ENST00000498219 AFDNP55196 1824 aaKnown RBP19.25■□□□□ 0.67
HPS1-214ENST00000498219 SCN7AQ01118 1682 aa19.25■□□□□ 0.67
HPS1-214ENST00000498219 A0A087WZG4 1122 aa19.25■□□□□ 0.67
HPS1-214ENST00000498219 WWC3Q9ULE0 1092 aa19.25■□□□□ 0.67
HPS1-214ENST00000498219 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
HPS1-214ENST00000498219 KIF13BQ9NQT8 1826 aa19.24■□□□□ 0.67
HPS1-214ENST00000498219 KRT24Q2M2I5 525 aa19.24■□□□□ 0.67
HPS1-214ENST00000498219 BICDL1Q6ZP65 573 aa19.24■□□□□ 0.67
HPS1-214ENST00000498219 CD2APQ9Y5K6 639 aa19.24■□□□□ 0.67
HPS1-214ENST00000498219 BCORQ6W2J9 1755 aa19.24■□□□□ 0.67
HPS1-214ENST00000498219 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
HPS1-214ENST00000498219 CHL1O00533 1208 aa19.23■□□□□ 0.67
HPS1-214ENST00000498219 TM4SF1P30408 202 aa19.23■□□□□ 0.67
HPS1-214ENST00000498219 NFIXQ14938 502 aa19.23■□□□□ 0.67
HPS1-214ENST00000498219 NGEFQ8N5V2 710 aa19.23■□□□□ 0.67
HPS1-214ENST00000498219 POLRMTO00411 1230 aaKnown RBP19.22■□□□□ 0.67
HPS1-214ENST00000498219 CAMTA2O94983 1202 aa19.22■□□□□ 0.67
HPS1-214ENST00000498219 EIF2S2P20042 333 aaKnown RBP19.22■□□□□ 0.67
HPS1-214ENST00000498219 NPM2Q86SE8 214 aaKnown RBP19.22■□□□□ 0.67
HPS1-214ENST00000498219 DZIP3Q86Y13 1208 aaKnown RBP19.22■□□□□ 0.67
HPS1-214ENST00000498219 BABAM1Q9NWV8 329 aa19.22■□□□□ 0.67
HPS1-214ENST00000498219 KIAA1551Q9HCM1 1747 aa19.22■□□□□ 0.67
HPS1-214ENST00000498219 MYL6BP14649 208 aa19.21■□□□□ 0.67
HPS1-214ENST00000498219 GPR162Q16538 588 aa19.21■□□□□ 0.67
HPS1-214ENST00000498219 NECTIN2Q92692 538 aa19.21■□□□□ 0.67
HPS1-214ENST00000498219 SALL2Q9Y467 1007 aaPredicted RBP19.21■□□□□ 0.67
HPS1-214ENST00000498219 C10orf71Q711Q0 1435 aa19.2■□□□□ 0.66
HPS1-214ENST00000498219 TBC1D9BQ66K14 1250 aa19.2■□□□□ 0.66
HPS1-214ENST00000498219 MBIPQ9NS73 344 aa19.2■□□□□ 0.66
HPS1-214ENST00000498219 CFAP44Q96MT7 982 aa19.19■□□□□ 0.66
HPS1-214ENST00000498219 ANXA1P04083 346 aa19.18■□□□□ 0.66
HPS1-214ENST00000498219 ZNF853P0CG23 659 aa19.18■□□□□ 0.66
HPS1-214ENST00000498219 YBX3P16989 372 aaKnown RBP eCLIP19.18■□□□□ 0.663e-7■■□□□ 14.1
HPS1-214ENST00000498219 NRXN2Q9P2S2 1712 aa19.17■□□□□ 0.66
HPS1-214ENST00000498219 PXDNLA1KZ92 1463 aa19.17■□□□□ 0.66
HPS1-214ENST00000498219 A0A0G2JLW4 131 aa19.17■□□□□ 0.66
HPS1-214ENST00000498219 SERPINB2P05120 415 aa19.17■□□□□ 0.66
HPS1-214ENST00000498219 PROSER3Q2NL68 480 aa19.17■□□□□ 0.66
HPS1-214ENST00000498219 NUP98P52948 1817 aa19.16■□□□□ 0.66
HPS1-214ENST00000498219 TTLL7Q6ZT98 887 aa19.16■□□□□ 0.66
HPS1-214ENST00000498219 IFT57Q9NWB7 429 aa19.16■□□□□ 0.66
HPS1-214ENST00000498219 DPEP1P16444 411 aa19.15■□□□□ 0.66
HPS1-214ENST00000498219 GNAI1P63096 354 aa19.15■□□□□ 0.66
HPS1-214ENST00000498219 PDIA6Q15084 440 aa19.15■□□□□ 0.66
HPS1-214ENST00000498219 HLFQ16534 295 aa19.15■□□□□ 0.66
HPS1-214ENST00000498219 WWC1Q8IX03 1113 aa19.15■□□□□ 0.66
HPS1-214ENST00000498219 CCDC24Q8N4L8 307 aa19.15■□□□□ 0.66
HPS1-214ENST00000498219 CHD4Q14839 1912 aa19.14■□□□□ 0.65
HPS1-214ENST00000498219 CALD1Q05682 793 aaKnown RBP19.14■□□□□ 0.65
HPS1-214ENST00000498219 CARMIL3Q8ND23 1372 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms