RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	CCDC87	Q9NVE4	849 aa		10.53	□□□□□ -0.72
EFNA1-205	ENST00000497282	SALL2	Q9Y467	1007 aa	Predicted RBP	10.53	□□□□□ -0.72
EFNA1-205	ENST00000497282	LAS1L	Q9Y4W2	734 aa	Known RBP	10.53	□□□□□ -0.72
EFNA1-205	ENST00000497282	USP16	Q9Y5T5	823 aa		10.53	□□□□□ -0.72
EFNA1-205	ENST00000497282	RPS6KA4	O75676	772 aa		10.52	□□□□□ -0.73
EFNA1-205	ENST00000497282	ZBTB7A	O95365	584 aa		10.52	□□□□□ -0.73
EFNA1-205	ENST00000497282	NCBP3	Q53F19	620 aa	Known RBP	10.52	□□□□□ -0.73
EFNA1-205	ENST00000497282	BABAM1	Q9NWV8	329 aa		10.52	□□□□□ -0.73
EFNA1-205	ENST00000497282	SOS1	Q07889	1333 aa	Predicted RBP	10.52	□□□□□ -0.73
EFNA1-205	ENST00000497282	COL15A1	P39059	1388 aa		10.52	□□□□□ -0.73
EFNA1-205	ENST00000497282	GIGYF1	O75420	1035 aa	Predicted RBP	10.51	□□□□□ -0.73
EFNA1-205	ENST00000497282	A1BG	P04217	495 aa		10.51	□□□□□ -0.73
EFNA1-205	ENST00000497282	SNRPA1	P09661	255 aa	Known RBP	10.51	□□□□□ -0.73
EFNA1-205	ENST00000497282	HMGB2	P26583	209 aa	Known RBP	10.51	□□□□□ -0.73
EFNA1-205	ENST00000497282	PIP4K2A	P48426	406 aa	Predicted RBP	10.51	□□□□□ -0.73
EFNA1-205	ENST00000497282	CFAP44	Q96MT7	982 aa		10.51	□□□□□ -0.73
EFNA1-205	ENST00000497282	MBIP	Q9NS73	344 aa		10.51	□□□□□ -0.73
EFNA1-205	ENST00000497282	IFT57	Q9NWB7	429 aa		10.51	□□□□□ -0.73
EFNA1-205	ENST00000497282	RTCB	Q9Y3I0	505 aa	Known RBP	10.51	□□□□□ -0.73
EFNA1-205	ENST00000497282	ZNF521	Q96K83	1311 aa		10.51	□□□□□ -0.73
EFNA1-205	ENST00000497282	CANX	P27824	592 aa	Known RBP	10.5	□□□□□ -0.73
EFNA1-205	ENST00000497282	PTGER2	P43116	358 aa		10.5	□□□□□ -0.73
EFNA1-205	ENST00000497282	ARHGEF1	Q92888	912 aa	Known RBP	10.5	□□□□□ -0.73
EFNA1-205	ENST00000497282	SGIP1	Q9BQI5	828 aa		10.5	□□□□□ -0.73
EFNA1-205	ENST00000497282	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.5	□□□□□ -0.73
EFNA1-205	ENST00000497282	MTFR1L	Q9H019	292 aa		10.5	□□□□□ -0.73
EFNA1-205	ENST00000497282	NBPF26	B4DH59	902 aa		10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	MSH5	O43196	834 aa		10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	STARD3NL	O95772	234 aa		10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	ADRA2B	P18089	450 aa		10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	GNAI1	P63096	354 aa		10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	CALD1	Q05682	793 aa	Known RBP	10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	MSL1	Q68DK7	614 aa		10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	NBPF10	Q6P3W6	841 aa	Known RBP	10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	NBPF15	Q8N660	670 aa		10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	FLAD1	Q8NFF5	587 aa		10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	SLC16A10	Q8TF71	515 aa		10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	TSR2	Q969E8	191 aa	Known RBP	10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	SRP68	Q9UHB9	627 aa	Known RBP	10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	IL16	Q14005	1332 aa		10.49	□□□□□ -0.73
EFNA1-205	ENST00000497282	EIF5	P55010	431 aa	Known RBP	10.48	□□□□□ -0.73
EFNA1-205	ENST00000497282	TRAPPC3L	Q5T215	181 aa		10.48	□□□□□ -0.73
EFNA1-205	ENST00000497282	SPON1	Q9HCB6	807 aa		10.48	□□□□□ -0.73
EFNA1-205	ENST00000497282	USP42	Q9H9J4	1324 aa	Known RBP	10.48	□□□□□ -0.73
EFNA1-205	ENST00000497282	FANCI	Q9NVI1	1328 aa		10.48	□□□□□ -0.73
EFNA1-205	ENST00000497282	GYS1	P13807	737 aa		10.47	□□□□□ -0.73
EFNA1-205	ENST00000497282	IL6ST	P40189	918 aa	Predicted RBP	10.47	□□□□□ -0.73
EFNA1-205	ENST00000497282	WDR63	Q8IWG1	891 aa		10.47	□□□□□ -0.73
EFNA1-205	ENST00000497282	NGEF	Q8N5V2	710 aa		10.47	□□□□□ -0.73
EFNA1-205	ENST00000497282	RFC4	P35249	363 aa		10.46	□□□□□ -0.73
EFNA1-205	ENST00000497282	PDIA6	Q15084	440 aa		10.46	□□□□□ -0.73
EFNA1-205	ENST00000497282	LRP10	Q7Z4F1	713 aa		10.46	□□□□□ -0.73
EFNA1-205	ENST00000497282	C8orf58	Q8NAV2	365 aa		10.46	□□□□□ -0.73
EFNA1-205	ENST00000497282	BCL2L12	Q9HB09	334 aa		10.46	□□□□□ -0.73
EFNA1-205	ENST00000497282	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.46	□□□□□ -0.73
EFNA1-205	ENST00000497282	NRXN2	Q9P2S2	1712 aa		10.46	□□□□□ -0.74
EFNA1-205	ENST00000497282	AFDN	P55196	1824 aa	Known RBP	10.45	□□□□□ -0.74
EFNA1-205	ENST00000497282	KIAA1551	Q9HCM1	1747 aa		10.45	□□□□□ -0.74
EFNA1-205	ENST00000497282	ANXA1	P04083	346 aa		10.45	□□□□□ -0.74
EFNA1-205	ENST00000497282	EIF2S2	P20042	333 aa	Known RBP	10.45	□□□□□ -0.74
EFNA1-205	ENST00000497282	PROSER3	Q2NL68	480 aa		10.45	□□□□□ -0.74
EFNA1-205	ENST00000497282	DUSP27	Q5VZP5	1158 aa		10.45	□□□□□ -0.74
EFNA1-205	ENST00000497282	USPL1	Q5W0Q7	1092 aa		10.45	□□□□□ -0.74
EFNA1-205	ENST00000497282	TSPYL6	Q8N831	410 aa		10.45	□□□□□ -0.74
EFNA1-205	ENST00000497282	NECTIN2	Q92692	538 aa		10.45	□□□□□ -0.74
EFNA1-205	ENST00000497282	NARF	Q9UHQ1	456 aa		10.45	□□□□□ -0.74
EFNA1-205	ENST00000497282	KIF13B	Q9NQT8	1826 aa		10.44	□□□□□ -0.74
EFNA1-205	ENST00000497282	ANKRD36C	Q5JPF3	1778 aa		10.44	□□□□□ -0.74
EFNA1-205	ENST00000497282	ERBB4	Q15303	1308 aa		10.44	□□□□□ -0.74
EFNA1-205	ENST00000497282	ELL2	O00472	640 aa	Predicted RBP	10.44	□□□□□ -0.74
EFNA1-205	ENST00000497282	HOXB7	P09629	217 aa		10.44	□□□□□ -0.74
EFNA1-205	ENST00000497282	MYL6B	P14649	208 aa		10.44	□□□□□ -0.74
EFNA1-205	ENST00000497282	FKBP8	Q14318	412 aa		10.44	□□□□□ -0.74
EFNA1-205	ENST00000497282	TBC1D2B	Q9UPU7	963 aa		10.44	□□□□□ -0.74
EFNA1-205	ENST00000497282	NUP98	P52948	1817 aa		10.44	□□□□□ -0.74
EFNA1-205	ENST00000497282	ARFGEF2	Q9Y6D5	1785 aa		10.44	□□□□□ -0.74
EFNA1-205	ENST00000497282	CAMTA2	O94983	1202 aa		10.43	□□□□□ -0.74
EFNA1-205	ENST00000497282	HDGFL1	Q5TGJ6	251 aa		10.43	□□□□□ -0.74
EFNA1-205	ENST00000497282	DZIP3	Q86Y13	1208 aa	Known RBP	10.43	□□□□□ -0.74
EFNA1-205	ENST00000497282	CHPF2	Q9P2E5	772 aa		10.43	□□□□□ -0.74
EFNA1-205	ENST00000497282		A0A087WZG4	1122 aa		10.42	□□□□□ -0.74
EFNA1-205	ENST00000497282	ZPR1	O75312	459 aa		10.42	□□□□□ -0.74
EFNA1-205	ENST00000497282	MMP10	P09238	476 aa		10.42	□□□□□ -0.74
EFNA1-205	ENST00000497282	EXOSC9	Q06265	439 aa	Known RBP	10.42	□□□□□ -0.74
EFNA1-205	ENST00000497282	DDR1	Q08345	913 aa		10.42	□□□□□ -0.74
EFNA1-205	ENST00000497282	GOLGA2	Q08379	1002 aa		10.42	□□□□□ -0.74
EFNA1-205	ENST00000497282	TTLL7	Q6ZT98	887 aa		10.42	□□□□□ -0.74
EFNA1-205	ENST00000497282	CDCA7L	Q96GN5	454 aa		10.42	□□□□□ -0.74
EFNA1-205	ENST00000497282	ARX	Q96QS3	562 aa		10.42	□□□□□ -0.74
EFNA1-205	ENST00000497282	ANKRD31	Q8N7Z5	1873 aa		10.41	□□□□□ -0.74
EFNA1-205	ENST00000497282	POLD1	P28340	1107 aa		10.41	□□□□□ -0.74
EFNA1-205	ENST00000497282	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
EFNA1-205	ENST00000497282	SLFN5	Q08AF3	891 aa		10.41	□□□□□ -0.74
EFNA1-205	ENST00000497282	NFIX	Q14938	502 aa		10.41	□□□□□ -0.74
EFNA1-205	ENST00000497282	TWISTNB	Q3B726	338 aa	Predicted RBP	10.41	□□□□□ -0.74
EFNA1-205	ENST00000497282	TBC1D9B	Q66K14	1250 aa		10.41	□□□□□ -0.74
EFNA1-205	ENST00000497282	NLGN1	Q8N2Q7	840 aa		10.41	□□□□□ -0.74
EFNA1-205	ENST00000497282	MYH16	Q9H6N6	1097 aa		10.41	□□□□□ -0.74

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