RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 PDGFDQ9GZP0 370 aaPredicted RBP9.96□□□□□ -0.82
CDHR3-214ENST00000496633 CD2APQ9Y5K6 639 aa9.96□□□□□ -0.82
CDHR3-214ENST00000496633 KCPQ6ZWJ8 1503 aa9.96□□□□□ -0.82
CDHR3-214ENST00000496633 IL6STP40189 918 aaPredicted RBP9.95□□□□□ -0.82
CDHR3-214ENST00000496633 TMPOP42166 694 aaKnown RBP9.95□□□□□ -0.82
CDHR3-214ENST00000496633 SLC39A6Q13433 755 aa9.95□□□□□ -0.82
CDHR3-214ENST00000496633 MCM10Q7L590 875 aa9.95□□□□□ -0.82
CDHR3-214ENST00000496633 DNAJC10Q8IXB1 793 aa9.95□□□□□ -0.82
CDHR3-214ENST00000496633 ARHGEF1Q92888 912 aaKnown RBP9.95□□□□□ -0.82
CDHR3-214ENST00000496633 SYT17Q9BSW7 474 aa9.95□□□□□ -0.82
CDHR3-214ENST00000496633 TJP1Q07157 1748 aa9.95□□□□□ -0.82
CDHR3-214ENST00000496633 INTS5Q6P9B9 1019 aaKnown RBP9.94□□□□□ -0.82
CDHR3-214ENST00000496633 NGEFQ8N5V2 710 aa9.94□□□□□ -0.82
CDHR3-214ENST00000496633 ZNF496Q96IT1 587 aaPredicted RBP9.94□□□□□ -0.82
CDHR3-214ENST00000496633 FHDC1Q9C0D6 1143 aaPredicted RBP9.94□□□□□ -0.82
CDHR3-214ENST00000496633 ADAMTS8Q9UP79 889 aa9.94□□□□□ -0.82
CDHR3-214ENST00000496633 PARP3Q9Y6F1 533 aa9.94□□□□□ -0.82
CDHR3-214ENST00000496633 DLG5Q8TDM6 1919 aa9.94□□□□□ -0.82
CDHR3-214ENST00000496633 SOS1Q07889 1333 aaPredicted RBP9.93□□□□□ -0.82
CDHR3-214ENST00000496633 ERBB4Q15303 1308 aa9.93□□□□□ -0.82
CDHR3-214ENST00000496633 USP42Q9H9J4 1324 aaKnown RBP9.93□□□□□ -0.82
CDHR3-214ENST00000496633 NARFQ9UHQ1 456 aa9.93□□□□□ -0.82
CDHR3-214ENST00000496633 PDZRN3Q9UPQ7 1066 aa9.93□□□□□ -0.82
CDHR3-214ENST00000496633 ZNF652Q9Y2D9 606 aa9.93□□□□□ -0.82
CDHR3-214ENST00000496633 COL15A1P39059 1388 aa9.92□□□□□ -0.82
CDHR3-214ENST00000496633 GRIN3BO60391 1043 aa9.92□□□□□ -0.82
CDHR3-214ENST00000496633 GYS1P13807 737 aa9.92□□□□□ -0.82
CDHR3-214ENST00000496633 EIF5P55010 431 aaKnown RBP9.92□□□□□ -0.82
CDHR3-214ENST00000496633 MRS2Q9HD23 443 aa9.92□□□□□ -0.82
CDHR3-214ENST00000496633 TSPYL4Q9UJ04 414 aa9.92□□□□□ -0.82
CDHR3-214ENST00000496633 MYH14Q7Z406 1995 aaKnown RBP9.92□□□□□ -0.82
CDHR3-214ENST00000496633 MMP10P09238 476 aa9.91□□□□□ -0.82
CDHR3-214ENST00000496633 CANXP27824 592 aaKnown RBP9.91□□□□□ -0.82
CDHR3-214ENST00000496633 TGFB2P61812 414 aa9.91□□□□□ -0.82
CDHR3-214ENST00000496633 DCTN1Q14203 1278 aa9.91□□□□□ -0.82
CDHR3-214ENST00000496633 CLEC4GQ6UXB4 293 aa9.91□□□□□ -0.82
CDHR3-214ENST00000496633 ZBTB1Q9Y2K1 713 aa9.91□□□□□ -0.82
CDHR3-214ENST00000496633 GIGYF1O75420 1035 aaPredicted RBP9.9□□□□□ -0.82
CDHR3-214ENST00000496633 HOXB7P09629 217 aa9.9□□□□□ -0.82
CDHR3-214ENST00000496633 MSL1Q68DK7 614 aa9.9□□□□□ -0.82
CDHR3-214ENST00000496633 KLHL34Q8N239 644 aa9.9□□□□□ -0.82
CDHR3-214ENST00000496633 KDM3BQ7LBC6 1761 aa9.9□□□□□ -0.82
CDHR3-214ENST00000496633 C4AP0C0L4 1744 aa9.9□□□□□ -0.83
CDHR3-214ENST00000496633 EIF4A1P60842 406 aaKnown RBP9.89□□□□□ -0.83
CDHR3-214ENST00000496633 GNAI1P63096 354 aa9.89□□□□□ -0.83
CDHR3-214ENST00000496633 NEUROD2Q15784 382 aa9.89□□□□□ -0.83
CDHR3-214ENST00000496633 GPR162Q16538 588 aa9.89□□□□□ -0.83
CDHR3-214ENST00000496633 CCDC27Q2M243 656 aa9.89□□□□□ -0.83
CDHR3-214ENST00000496633 CCDC146Q8IYE0 955 aa9.89□□□□□ -0.83
CDHR3-214ENST00000496633 CFAP44Q96MT7 982 aa9.89□□□□□ -0.83
CDHR3-214ENST00000496633 CHL1O00533 1208 aa9.88□□□□□ -0.83
CDHR3-214ENST00000496633 APAF1O14727 1248 aa9.88□□□□□ -0.83
CDHR3-214ENST00000496633 USPL1Q5W0Q7 1092 aa9.88□□□□□ -0.83
CDHR3-214ENST00000496633 AMIGO3Q86WK7 504 aa9.88□□□□□ -0.83
CDHR3-214ENST00000496633 DZIP3Q86Y13 1208 aaKnown RBP9.88□□□□□ -0.83
CDHR3-214ENST00000496633 IFT57Q9NWB7 429 aa9.88□□□□□ -0.83
CDHR3-214ENST00000496633 USP16Q9Y5T5 823 aa9.88□□□□□ -0.83
CDHR3-214ENST00000496633 LAMB4A4D0S4 1761 aa9.88□□□□□ -0.83
CDHR3-214ENST00000496633 A1BGP04217 495 aa9.87□□□□□ -0.83
CDHR3-214ENST00000496633 TM4SF1P30408 202 aa9.87□□□□□ -0.83
CDHR3-214ENST00000496633 KIF6Q6ZMV9 814 aa9.87□□□□□ -0.83
CDHR3-214ENST00000496633 SETDB2Q96T68 719 aa9.87□□□□□ -0.83
CDHR3-214ENST00000496633 ZNF330Q9Y3S2 320 aaPredicted RBP9.87□□□□□ -0.83
CDHR3-214ENST00000496633 CARMIL3Q8ND23 1372 aa9.87□□□□□ -0.83
CDHR3-214ENST00000496633 IL16Q14005 1332 aa9.86□□□□□ -0.83
CDHR3-214ENST00000496633 ERVV-1B6SEH8 477 aa9.86□□□□□ -0.83
CDHR3-214ENST00000496633 NPHP1O15259 732 aa9.86□□□□□ -0.83
CDHR3-214ENST00000496633 KCNQ3O43525 872 aa9.86□□□□□ -0.83
CDHR3-214ENST00000496633 MIS18AQ9NYP9 233 aa9.86□□□□□ -0.83
CDHR3-214ENST00000496633 TRIM35Q9UPQ4 493 aa9.86□□□□□ -0.83
CDHR3-214ENST00000496633 C10orf71Q711Q0 1435 aa9.85□□□□□ -0.83
CDHR3-214ENST00000496633 KIF13BQ9NQT8 1826 aa9.85□□□□□ -0.83
CDHR3-214ENST00000496633 POLRMTO00411 1230 aaKnown RBP9.85□□□□□ -0.83
CDHR3-214ENST00000496633 PDE6BP35913 854 aa9.85□□□□□ -0.83
CDHR3-214ENST00000496633 ST5P78524 1137 aa9.85□□□□□ -0.83
CDHR3-214ENST00000496633 HSP90AB3PQ58FF7 597 aa9.85□□□□□ -0.83
CDHR3-214ENST00000496633 THUMPD2Q9BTF0 503 aaKnown RBP9.85□□□□□ -0.83
CDHR3-214ENST00000496633 NYXQ9GZU5 481 aa9.85□□□□□ -0.83
CDHR3-214ENST00000496633 SRP68Q9UHB9 627 aaKnown RBP9.85□□□□□ -0.83
CDHR3-214ENST00000496633 RRP7AQ9Y3A4 280 aaKnown RBP9.85□□□□□ -0.83
CDHR3-214ENST00000496633 LAS1LQ9Y4W2 734 aaKnown RBP9.85□□□□□ -0.83
CDHR3-214ENST00000496633 SCN7AQ01118 1682 aa9.84□□□□□ -0.83
CDHR3-214ENST00000496633 CCER2I3L3R5 266 aa9.84□□□□□ -0.83
CDHR3-214ENST00000496633 SERPINB2P05120 415 aa9.84□□□□□ -0.83
CDHR3-214ENST00000496633 NFIXQ14938 502 aa9.84□□□□□ -0.83
CDHR3-214ENST00000496633 TPTE2Q6XPS3 522 aa9.84□□□□□ -0.83
CDHR3-214ENST00000496633 WDR63Q8IWG1 891 aa9.84□□□□□ -0.83
CDHR3-214ENST00000496633 PIM2Q9P1W9 311 aa9.84□□□□□ -0.83
CDHR3-214ENST00000496633 DBF4Q9UBU7 674 aaPredicted RBP9.84□□□□□ -0.83
CDHR3-214ENST00000496633 TBC1D2BQ9UPU7 963 aa9.84□□□□□ -0.83
CDHR3-214ENST00000496633 CAMTA2O94983 1202 aa9.83□□□□□ -0.84
CDHR3-214ENST00000496633 SMIM5Q71RC9 77 aa9.83□□□□□ -0.84
CDHR3-214ENST00000496633 PELP1Q8IZL8 1130 aaKnown RBP9.83□□□□□ -0.84
CDHR3-214ENST00000496633 NLGN2Q8NFZ4 835 aa9.83□□□□□ -0.84
CDHR3-214ENST00000496633 BRIP1Q9BX63 1249 aa9.83□□□□□ -0.84
CDHR3-214ENST00000496633 DDX21Q9NR30 783 aaKnown RBP eCLIP9.83□□□□□ -0.84
CDHR3-214ENST00000496633 HYPKQ9NX55 129 aa9.83□□□□□ -0.84
CDHR3-214ENST00000496633 RNF123Q5XPI4 1314 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 MAP3K15Q6ZN16 1313 aa9.82□□□□□ -0.84
CDHR3-214ENST00000496633 CHD4Q14839 1912 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms