RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 TWISTNBQ3B726 338 aaPredicted RBP17.48■□□□□ 0.39
PTPN7-218ENST00000496197 NECTIN2Q92692 538 aa17.48■□□□□ 0.39
PTPN7-218ENST00000496197 VAMP4O75379 141 aa17.47■□□□□ 0.39
PTPN7-218ENST00000496197 CYP19A1P11511 503 aaPredicted RBP17.47■□□□□ 0.39
PTPN7-218ENST00000496197 PIP4K2AP48426 406 aaPredicted RBP17.47■□□□□ 0.39
PTPN7-218ENST00000496197 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
PTPN7-218ENST00000496197 C4AP0C0L4 1744 aa17.46■□□□□ 0.39
PTPN7-218ENST00000496197 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
PTPN7-218ENST00000496197 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
PTPN7-218ENST00000496197 A1BGP04217 495 aa17.45■□□□□ 0.38
PTPN7-218ENST00000496197 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
PTPN7-218ENST00000496197 SMIM5Q71RC9 77 aa17.45■□□□□ 0.38
PTPN7-218ENST00000496197 CRKLP46109 303 aaKnown RBP17.44■□□□□ 0.38
PTPN7-218ENST00000496197 ZNF827Q17R98 1081 aa17.44■□□□□ 0.38
PTPN7-218ENST00000496197 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
PTPN7-218ENST00000496197 ANO8Q9HCE9 1232 aaPredicted RBP17.44■□□□□ 0.38
PTPN7-218ENST00000496197 ZBTB1Q9Y2K1 713 aa17.44■□□□□ 0.38
PTPN7-218ENST00000496197 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
PTPN7-218ENST00000496197 NBPF26B4DH59 902 aa17.44■□□□□ 0.38
PTPN7-218ENST00000496197 HOXB7P09629 217 aa17.44■□□□□ 0.38
PTPN7-218ENST00000496197 NBPF14Q5TI25 921 aa17.44■□□□□ 0.38
PTPN7-218ENST00000496197 NBPF10Q6P3W6 841 aaKnown RBP17.44■□□□□ 0.38
PTPN7-218ENST00000496197 NBPF15Q8N660 670 aa17.44■□□□□ 0.38
PTPN7-218ENST00000496197 CACNA1FO60840 1977 aa17.43■□□□□ 0.38
PTPN7-218ENST00000496197 ANXA1P04083 346 aa17.43■□□□□ 0.38
PTPN7-218ENST00000496197 PDIA6Q15084 440 aa17.43■□□□□ 0.38
PTPN7-218ENST00000496197 PROSER3Q2NL68 480 aa17.43■□□□□ 0.38
PTPN7-218ENST00000496197 HDGFL1Q5TGJ6 251 aa17.43■□□□□ 0.38
PTPN7-218ENST00000496197 CHPF2Q9P2E5 772 aa17.42■□□□□ 0.38
PTPN7-218ENST00000496197 CNTNAP4Q9C0A0 1308 aa17.42■□□□□ 0.38
PTPN7-218ENST00000496197 LRP10Q7Z4F1 713 aa17.41■□□□□ 0.38
PTPN7-218ENST00000496197 AKT1S1Q96B36 256 aa17.41■□□□□ 0.38
PTPN7-218ENST00000496197 TEX13AQ9BXU3 409 aaPredicted RBP17.41■□□□□ 0.38
PTPN7-218ENST00000496197 CCDC87Q9NVE4 849 aa17.41■□□□□ 0.38
PTPN7-218ENST00000496197 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
PTPN7-218ENST00000496197 STARD3NLO95772 234 aa17.4■□□□□ 0.38
PTPN7-218ENST00000496197 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
PTPN7-218ENST00000496197 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
PTPN7-218ENST00000496197 BCL2L13Q9BXK5 485 aa17.39■□□□□ 0.37
PTPN7-218ENST00000496197 GNPATO15228 680 aa17.38■□□□□ 0.37
PTPN7-218ENST00000496197 MYL6BP14649 208 aa17.38■□□□□ 0.37
PTPN7-218ENST00000496197 RC3H1Q5TC82 1133 aaKnown RBP17.38■□□□□ 0.37
PTPN7-218ENST00000496197 SCN7AQ01118 1682 aa17.38■□□□□ 0.37
PTPN7-218ENST00000496197 SSH1Q8WYL5 1049 aa17.37■□□□□ 0.37
PTPN7-218ENST00000496197 ARFGEF2Q9Y6D5 1785 aa17.37■□□□□ 0.37
PTPN7-218ENST00000496197 RARSP54136 660 aaKnown RBP17.37■□□□□ 0.37
PTPN7-218ENST00000496197 CCDC30Q5VVM6 783 aa17.37■□□□□ 0.37
PTPN7-218ENST00000496197 G2E3Q7L622 706 aa17.37■□□□□ 0.37
PTPN7-218ENST00000496197 AK7Q96M32 723 aa17.37■□□□□ 0.37
PTPN7-218ENST00000496197 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
PTPN7-218ENST00000496197 DDX21Q9NR30 783 aaKnown RBP eCLIP17.37■□□□□ 0.37
PTPN7-218ENST00000496197 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
PTPN7-218ENST00000496197 ERBB4Q15303 1308 aa17.36■□□□□ 0.37
PTPN7-218ENST00000496197 CT47B1P0C2W7 299 aaPredicted RBP17.36■□□□□ 0.37
PTPN7-218ENST00000496197 EIF5P55010 431 aaKnown RBP17.36■□□□□ 0.37
PTPN7-218ENST00000496197 DBF4Q9UBU7 674 aaPredicted RBP17.36■□□□□ 0.37
PTPN7-218ENST00000496197 NUP98P52948 1817 aa17.36■□□□□ 0.37
PTPN7-218ENST00000496197 COL15A1P39059 1388 aa17.35■□□□□ 0.37
PTPN7-218ENST00000496197 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
PTPN7-218ENST00000496197 BCAR3O75815 825 aa17.35■□□□□ 0.37
PTPN7-218ENST00000496197 PHF14O94880 888 aa17.35■□□□□ 0.37
PTPN7-218ENST00000496197 SLC15A2Q16348 729 aa17.35■□□□□ 0.37
PTPN7-218ENST00000496197 MRPL50Q8N5N7 158 aaKnown RBP17.35■□□□□ 0.37
PTPN7-218ENST00000496197 ZNF330Q9Y3S2 320 aaPredicted RBP17.35■□□□□ 0.37
PTPN7-218ENST00000496197 PNPLA7Q6ZV29 1317 aa17.34■□□□□ 0.37
PTPN7-218ENST00000496197 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
PTPN7-218ENST00000496197 IL6STP40189 918 aaPredicted RBP17.34■□□□□ 0.37
PTPN7-218ENST00000496197 PDGFDQ9GZP0 370 aaPredicted RBP17.34■□□□□ 0.37
PTPN7-218ENST00000496197 TTLL7Q6ZT98 887 aa17.33■□□□□ 0.37
PTPN7-218ENST00000496197 TFCP2L1Q9NZI6 479 aa17.33■□□□□ 0.37
PTPN7-218ENST00000496197 RTCBQ9Y3I0 505 aaKnown RBP17.33■□□□□ 0.37
PTPN7-218ENST00000496197 ANKRD36CQ5JPF3 1778 aa17.33■□□□□ 0.36
PTPN7-218ENST00000496197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.32■□□□□ 0.36
PTPN7-218ENST00000496197 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
PTPN7-218ENST00000496197 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
PTPN7-218ENST00000496197 ARHGEF1Q92888 912 aaKnown RBP17.32■□□□□ 0.36
PTPN7-218ENST00000496197 STK31Q9BXU1 1019 aa17.32■□□□□ 0.36
PTPN7-218ENST00000496197 SMC4Q9NTJ3 1288 aa17.32■□□□□ 0.36
PTPN7-218ENST00000496197 STK32BQ9NY57 414 aa17.32■□□□□ 0.36
PTPN7-218ENST00000496197 AIMP1Q12904 312 aaKnown RBP17.31■□□□□ 0.36
PTPN7-218ENST00000496197 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
PTPN7-218ENST00000496197 COL23A1Q86Y22 540 aaPredicted RBP17.31■□□□□ 0.36
PTPN7-218ENST00000496197 ZNF428Q96B54 188 aa17.31■□□□□ 0.36
PTPN7-218ENST00000496197 SSFA2P28290 1259 aa17.31■□□□□ 0.36
PTPN7-218ENST00000496197 HYPKQ9NX55 129 aa17.31■□□□□ 0.36
PTPN7-218ENST00000496197 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
PTPN7-218ENST00000496197 RCAN3Q9UKA8 241 aa17.31■□□□□ 0.36
PTPN7-218ENST00000496197 TBC1D2BQ9UPU7 963 aa17.31■□□□□ 0.36
PTPN7-218ENST00000496197 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
PTPN7-218ENST00000496197 FLIIQ13045 1269 aa17.3■□□□□ 0.36
PTPN7-218ENST00000496197 AFDNP55196 1824 aaKnown RBP17.29■□□□□ 0.36
PTPN7-218ENST00000496197 ADCY9O60503 1353 aa17.29■□□□□ 0.36
PTPN7-218ENST00000496197 DZIP3Q86Y13 1208 aaKnown RBP17.29■□□□□ 0.36
PTPN7-218ENST00000496197 TNNQ9UQP3 1299 aa17.29■□□□□ 0.36
PTPN7-218ENST00000496197 PSDA5PKW4 1024 aaPredicted RBP17.28■□□□□ 0.36
PTPN7-218ENST00000496197 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
PTPN7-218ENST00000496197 R3HDM1Q15032 1099 aaKnown RBP17.28■□□□□ 0.36
PTPN7-218ENST00000496197 TRAPPC3LQ5T215 181 aa17.28■□□□□ 0.36
PTPN7-218ENST00000496197 ZBTB3Q9H5J0 574 aa17.28■□□□□ 0.36
PTPN7-218ENST00000496197 BCL2L12Q9HB09 334 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms