RNA–Protein interactions for RNA: ENST00000495805.5

PSMB4-207, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 811 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-207ENST00000495805 SMIM5Q71RC9 77 aa17.68■□□□□ 0.42
PSMB4-207ENST00000495805 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
PSMB4-207ENST00000495805 ARHGEF1Q92888 912 aaKnown RBP17.68■□□□□ 0.42
PSMB4-207ENST00000495805 SGIP1Q9BQI5 828 aa17.68■□□□□ 0.42
PSMB4-207ENST00000495805 CALD1Q05682 793 aaKnown RBP17.67■□□□□ 0.42
PSMB4-207ENST00000495805 MSL1Q68DK7 614 aa17.67■□□□□ 0.42
PSMB4-207ENST00000495805 TSPYL4Q9UJ04 414 aa17.67■□□□□ 0.42
PSMB4-207ENST00000495805 NLGN1Q8N2Q7 840 aa17.66■□□□□ 0.42
PSMB4-207ENST00000495805 TRIM35Q9UPQ4 493 aa17.66■□□□□ 0.42
PSMB4-207ENST00000495805 ZPR1O75312 459 aa17.65■□□□□ 0.42
PSMB4-207ENST00000495805 CANXP27824 592 aaKnown RBP17.65■□□□□ 0.42
PSMB4-207ENST00000495805 ZBTB1Q9Y2K1 713 aa17.65■□□□□ 0.42
PSMB4-207ENST00000495805 SOS1Q07889 1333 aaPredicted RBP17.65■□□□□ 0.42
PSMB4-207ENST00000495805 A0A087WZG4 1122 aa17.64■□□□□ 0.41
PSMB4-207ENST00000495805 EIF4A1P60842 406 aaKnown RBP17.64■□□□□ 0.41
PSMB4-207ENST00000495805 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
PSMB4-207ENST00000495805 IL6STP40189 918 aaPredicted RBP17.63■□□□□ 0.41
PSMB4-207ENST00000495805 LAS1LQ9Y4W2 734 aaKnown RBP17.63■□□□□ 0.41
PSMB4-207ENST00000495805 USP16Q9Y5T5 823 aa17.63■□□□□ 0.41
PSMB4-207ENST00000495805 COL24A1Q17RW2 1714 aa17.62■□□□□ 0.41
PSMB4-207ENST00000495805 A1BGP04217 495 aa17.62■□□□□ 0.41
PSMB4-207ENST00000495805 FAM9BQ8IZU0 186 aa17.62■□□□□ 0.41
PSMB4-207ENST00000495805 COL15A1P39059 1388 aa17.62■□□□□ 0.41
PSMB4-207ENST00000495805 KDM3BQ7LBC6 1761 aa17.61■□□□□ 0.41
PSMB4-207ENST00000495805 DCAF8L1A6NGE4 600 aa17.61■□□□□ 0.41
PSMB4-207ENST00000495805 CHL1O00533 1208 aa17.61■□□□□ 0.41
PSMB4-207ENST00000495805 GIGYF1O75420 1035 aaPredicted RBP17.61■□□□□ 0.41
PSMB4-207ENST00000495805 GYS1P13807 737 aa17.61■□□□□ 0.41
PSMB4-207ENST00000495805 EIF5P55010 431 aaKnown RBP17.61■□□□□ 0.41
PSMB4-207ENST00000495805 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
PSMB4-207ENST00000495805 FHDC1Q9C0D6 1143 aaPredicted RBP17.61■□□□□ 0.41
PSMB4-207ENST00000495805 NARFQ9UHQ1 456 aa17.61■□□□□ 0.41
PSMB4-207ENST00000495805 ZNF330Q9Y3S2 320 aaPredicted RBP17.61■□□□□ 0.41
PSMB4-207ENST00000495805 USP42Q9H9J4 1324 aaKnown RBP17.61■□□□□ 0.41
PSMB4-207ENST00000495805 KLHL34Q8N239 644 aa17.6■□□□□ 0.41
PSMB4-207ENST00000495805 CFAP44Q96MT7 982 aa17.6■□□□□ 0.41
PSMB4-207ENST00000495805 SYT17Q9BSW7 474 aa17.6■□□□□ 0.41
PSMB4-207ENST00000495805 PRAMEF22A3QJZ6 481 aa17.59■□□□□ 0.41
PSMB4-207ENST00000495805 MMP10P09238 476 aa17.59■□□□□ 0.41
PSMB4-207ENST00000495805 GNAI1P63096 354 aa17.59■□□□□ 0.41
PSMB4-207ENST00000495805 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
PSMB4-207ENST00000495805 SRP68Q9UHB9 627 aaKnown RBP17.59■□□□□ 0.41
PSMB4-207ENST00000495805 CCER2I3L3R5 266 aa17.58■□□□□ 0.4
PSMB4-207ENST00000495805 USPL1Q5W0Q7 1092 aa17.58■□□□□ 0.4
PSMB4-207ENST00000495805 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
PSMB4-207ENST00000495805 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
PSMB4-207ENST00000495805 PARP3Q9Y6F1 533 aa17.58■□□□□ 0.4
PSMB4-207ENST00000495805 NGEFQ8N5V2 710 aa17.57■□□□□ 0.4
PSMB4-207ENST00000495805 CD2APQ9Y5K6 639 aa17.57■□□□□ 0.4
PSMB4-207ENST00000495805 C4AP0C0L4 1744 aa17.57■□□□□ 0.4
PSMB4-207ENST00000495805 FKBP8Q14318 412 aa17.56■□□□□ 0.4
PSMB4-207ENST00000495805 DZIP3Q86Y13 1208 aaKnown RBP17.55■□□□□ 0.4
PSMB4-207ENST00000495805 WWC1Q8IX03 1113 aa17.55■□□□□ 0.4
PSMB4-207ENST00000495805 TBC1D2BQ9UPU7 963 aa17.55■□□□□ 0.4
PSMB4-207ENST00000495805 ERBB4Q15303 1308 aa17.54■□□□□ 0.4
PSMB4-207ENST00000495805 ZNF853P0CG23 659 aa17.54■□□□□ 0.4
PSMB4-207ENST00000495805 LAMB4A4D0S4 1761 aa17.53■□□□□ 0.4
PSMB4-207ENST00000495805 NBPF26B4DH59 902 aa17.53■□□□□ 0.4
PSMB4-207ENST00000495805 HOXB7P09629 217 aa17.53■□□□□ 0.4
PSMB4-207ENST00000495805 EIF2S2P20042 333 aaKnown RBP17.53■□□□□ 0.4
PSMB4-207ENST00000495805 PIP4K2AP48426 406 aaPredicted RBP17.53■□□□□ 0.4
PSMB4-207ENST00000495805 NBPF10Q6P3W6 841 aaKnown RBP17.53■□□□□ 0.4
PSMB4-207ENST00000495805 NBPF15Q8N660 670 aa17.53■□□□□ 0.4
PSMB4-207ENST00000495805 CHMP4AQ9BY43 222 aa17.53■□□□□ 0.4
PSMB4-207ENST00000495805 MBIPQ9NS73 344 aa17.53■□□□□ 0.4
PSMB4-207ENST00000495805 ZNF652Q9Y2D9 606 aa17.53■□□□□ 0.4
PSMB4-207ENST00000495805 IL16Q14005 1332 aa17.52■□□□□ 0.4
PSMB4-207ENST00000495805 TM4SF1P30408 202 aa17.52■□□□□ 0.4
PSMB4-207ENST00000495805 RGL2O15211 777 aa17.51■□□□□ 0.39
PSMB4-207ENST00000495805 MYL6BP14649 208 aa17.51■□□□□ 0.39
PSMB4-207ENST00000495805 CLEC4GQ6UXB4 293 aa17.51■□□□□ 0.39
PSMB4-207ENST00000495805 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
PSMB4-207ENST00000495805 BCL2L12Q9HB09 334 aa17.51■□□□□ 0.39
PSMB4-207ENST00000495805 SALL2Q9Y467 1007 aaPredicted RBP17.51■□□□□ 0.39
PSMB4-207ENST00000495805 SENP3-EIF4A1A0A087X0R7 540 aa17.5■□□□□ 0.39
PSMB4-207ENST00000495805 CAMTA2O94983 1202 aa17.5■□□□□ 0.39
PSMB4-207ENST00000495805 NFIXQ14938 502 aa17.5■□□□□ 0.39
PSMB4-207ENST00000495805 KIF6Q6ZMV9 814 aa17.5■□□□□ 0.39
PSMB4-207ENST00000495805 POLRMTO00411 1230 aaKnown RBP17.49■□□□□ 0.39
PSMB4-207ENST00000495805 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
PSMB4-207ENST00000495805 SETDB2Q96T68 719 aa17.49■□□□□ 0.39
PSMB4-207ENST00000495805 TGFB2P61812 414 aa17.48■□□□□ 0.39
PSMB4-207ENST00000495805 DDR1Q08345 913 aa17.48■□□□□ 0.39
PSMB4-207ENST00000495805 KRT24Q2M2I5 525 aa17.48■□□□□ 0.39
PSMB4-207ENST00000495805 HDGFL1Q5TGJ6 251 aa17.48■□□□□ 0.39
PSMB4-207ENST00000495805 BICDL1Q6ZP65 573 aa17.48■□□□□ 0.39
PSMB4-207ENST00000495805 NLGN2Q8NFZ4 835 aa17.48■□□□□ 0.39
PSMB4-207ENST00000495805 GOLGB1Q14789 3259 aaKnown RBP17.48■□□□□ 0.39
PSMB4-207ENST00000495805 ERVV-1B6SEH8 477 aa17.47■□□□□ 0.39
PSMB4-207ENST00000495805 SERPINB2P05120 415 aa17.47■□□□□ 0.39
PSMB4-207ENST00000495805 TBC1D9BQ66K14 1250 aa17.47■□□□□ 0.39
PSMB4-207ENST00000495805 NECTIN2Q92692 538 aa17.47■□□□□ 0.39
PSMB4-207ENST00000495805 SCN7AQ01118 1682 aa17.46■□□□□ 0.39
PSMB4-207ENST00000495805 CARMIL3Q8ND23 1372 aa17.46■□□□□ 0.39
PSMB4-207ENST00000495805 GPR162Q16538 588 aa17.46■□□□□ 0.39
PSMB4-207ENST00000495805 DDX21Q9NR30 783 aaKnown RBP eCLIP17.46■□□□□ 0.39
PSMB4-207ENST00000495805 DBF4Q9UBU7 674 aaPredicted RBP17.46■□□□□ 0.39
PSMB4-207ENST00000495805 C10orf71Q711Q0 1435 aa17.46■□□□□ 0.39
PSMB4-207ENST00000495805 NPHP1O15259 732 aa17.45■□□□□ 0.38
PSMB4-207ENST00000495805 PDIA6Q15084 440 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms