RNA–Protein interactions for RNA: ENST00000495581.1

SMIM29-208, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 911 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-208ENST00000495581 TSPYL4Q9UJ04 414 aa27.44■■□□□ 1.98
SMIM29-208ENST00000495581 RFC4P35249 363 aa27.43■■□□□ 1.98
SMIM29-208ENST00000495581 ARHGEF1Q92888 912 aaKnown RBP27.43■■□□□ 1.98
SMIM29-208ENST00000495581 SGIP1Q9BQI5 828 aa27.42■■□□□ 1.98
SMIM29-208ENST00000495581 MYH14Q7Z406 1995 aaKnown RBP27.42■■□□□ 1.98
SMIM29-208ENST00000495581 CALD1Q05682 793 aaKnown RBP27.41■■□□□ 1.98
SMIM29-208ENST00000495581 FAM9BQ8IZU0 186 aa27.4■■□□□ 1.98
SMIM29-208ENST00000495581 ZBTB1Q9Y2K1 713 aa27.4■■□□□ 1.98
SMIM29-208ENST00000495581 SOS1Q07889 1333 aaPredicted RBP27.4■■□□□ 1.98
SMIM29-208ENST00000495581 EIF4A1P60842 406 aaKnown RBP27.39■■□□□ 1.98
SMIM29-208ENST00000495581 MSL1Q68DK7 614 aa27.39■■□□□ 1.98
SMIM29-208ENST00000495581 ARXQ96QS3 562 aa27.39■■□□□ 1.98
SMIM29-208ENST00000495581 CANXP27824 592 aaKnown RBP27.38■■□□□ 1.97
SMIM29-208ENST00000495581 DIEXFQ68CQ4 756 aaKnown RBP27.38■■□□□ 1.97
SMIM29-208ENST00000495581 NPM2Q86SE8 214 aaKnown RBP27.37■■□□□ 1.97
SMIM29-208ENST00000495581 LAS1LQ9Y4W2 734 aaKnown RBP27.37■■□□□ 1.97
SMIM29-208ENST00000495581 USP16Q9Y5T5 823 aa27.37■■□□□ 1.97
SMIM29-208ENST00000495581 KDM3BQ7LBC6 1761 aa27.37■■□□□ 1.97
SMIM29-208ENST00000495581 CCER2I3L3R5 266 aa27.36■■□□□ 1.97
SMIM29-208ENST00000495581 CHL1O00533 1208 aa27.36■■□□□ 1.97
SMIM29-208ENST00000495581 NCBP3Q53F19 620 aaKnown RBP27.36■■□□□ 1.97
SMIM29-208ENST00000495581 NLGN1Q8N2Q7 840 aa27.36■■□□□ 1.97
SMIM29-208ENST00000495581 A0A087WZG4 1122 aa27.35■■□□□ 1.97
SMIM29-208ENST00000495581 GIGYF1O75420 1035 aaPredicted RBP27.35■■□□□ 1.97
SMIM29-208ENST00000495581 COL24A1Q17RW2 1714 aa27.35■■□□□ 1.97
SMIM29-208ENST00000495581 PRAMEF22A3QJZ6 481 aa27.34■■□□□ 1.97
SMIM29-208ENST00000495581 ZPR1O75312 459 aa27.34■■□□□ 1.97
SMIM29-208ENST00000495581 A1BGP04217 495 aa27.34■■□□□ 1.97
SMIM29-208ENST00000495581 IL6STP40189 918 aaPredicted RBP27.34■■□□□ 1.97
SMIM29-208ENST00000495581 CCDC27Q2M243 656 aa27.34■■□□□ 1.97
SMIM29-208ENST00000495581 CFAP44Q96MT7 982 aa27.34■■□□□ 1.97
SMIM29-208ENST00000495581 COL15A1P39059 1388 aa27.34■■□□□ 1.97
SMIM29-208ENST00000495581 EIF5P55010 431 aaKnown RBP27.33■■□□□ 1.97
SMIM29-208ENST00000495581 USP42Q9H9J4 1324 aaKnown RBP27.32■■□□□ 1.96
SMIM29-208ENST00000495581 GYS1P13807 737 aa27.31■■□□□ 1.96
SMIM29-208ENST00000495581 GNAI1P63096 354 aa27.31■■□□□ 1.96
SMIM29-208ENST00000495581 IFT57Q9NWB7 429 aa27.31■■□□□ 1.96
SMIM29-208ENST00000495581 NARFQ9UHQ1 456 aa27.31■■□□□ 1.96
SMIM29-208ENST00000495581 SRP68Q9UHB9 627 aaKnown RBP27.3■■□□□ 1.96
SMIM29-208ENST00000495581 ZNF330Q9Y3S2 320 aaPredicted RBP27.3■■□□□ 1.96
SMIM29-208ENST00000495581 FHDC1Q9C0D6 1143 aaPredicted RBP27.29■■□□□ 1.96
SMIM29-208ENST00000495581 NGEFQ8N5V2 710 aa27.28■■□□□ 1.96
SMIM29-208ENST00000495581 C4AP0C0L4 1744 aa27.27■■□□□ 1.96
SMIM29-208ENST00000495581 MMP10P09238 476 aa27.27■■□□□ 1.96
SMIM29-208ENST00000495581 ZNF853P0CG23 659 aa27.27■■□□□ 1.96
SMIM29-208ENST00000495581 USPL1Q5W0Q7 1092 aa27.27■■□□□ 1.96
SMIM29-208ENST00000495581 WWC1Q8IX03 1113 aa27.27■■□□□ 1.96
SMIM29-208ENST00000495581 SENP3-EIF4A1A0A087X0R7 540 aa27.25■■□□□ 1.95
SMIM29-208ENST00000495581 SYT17Q9BSW7 474 aa27.25■■□□□ 1.95
SMIM29-208ENST00000495581 MBIPQ9NS73 344 aa27.25■■□□□ 1.95
SMIM29-208ENST00000495581 ERBB4Q15303 1308 aa27.24■■□□□ 1.95
SMIM29-208ENST00000495581 FKBP8Q14318 412 aa27.24■■□□□ 1.95
SMIM29-208ENST00000495581 KLHL34Q8N239 644 aa27.24■■□□□ 1.95
SMIM29-208ENST00000495581 LAMB4A4D0S4 1761 aa27.24■■□□□ 1.95
SMIM29-208ENST00000495581 NBPF26B4DH59 902 aa27.23■■□□□ 1.95
SMIM29-208ENST00000495581 PIP4K2AP48426 406 aaPredicted RBP27.23■■□□□ 1.95
SMIM29-208ENST00000495581 NBPF10Q6P3W6 841 aaKnown RBP27.23■■□□□ 1.95
SMIM29-208ENST00000495581 NBPF15Q8N660 670 aa27.23■■□□□ 1.95
SMIM29-208ENST00000495581 TBC1D2BQ9UPU7 963 aa27.23■■□□□ 1.95
SMIM29-208ENST00000495581 PARP3Q9Y6F1 533 aa27.23■■□□□ 1.95
SMIM29-208ENST00000495581 HOXB7P09629 217 aa27.22■■□□□ 1.95
SMIM29-208ENST00000495581 SALL2Q9Y467 1007 aaPredicted RBP27.22■■□□□ 1.95
SMIM29-208ENST00000495581 IL16Q14005 1332 aa27.21■■□□□ 1.95
SMIM29-208ENST00000495581 EIF2S2P20042 333 aaKnown RBP27.21■■□□□ 1.95
SMIM29-208ENST00000495581 DZIP3Q86Y13 1208 aaKnown RBP27.21■■□□□ 1.95
SMIM29-208ENST00000495581 CD2APQ9Y5K6 639 aa27.21■■□□□ 1.95
SMIM29-208ENST00000495581 WDR63Q8IWG1 891 aa27.2■■□□□ 1.94
SMIM29-208ENST00000495581 MIER1Q8N108 512 aa27.19■■□□□ 1.94
SMIM29-208ENST00000495581 TM4SF1P30408 202 aa27.18■■□□□ 1.94
SMIM29-208ENST00000495581 KRT24Q2M2I5 525 aa27.18■■□□□ 1.94
SMIM29-208ENST00000495581 BCL2L12Q9HB09 334 aa27.18■■□□□ 1.94
SMIM29-208ENST00000495581 DCAF8L1A6NGE4 600 aa27.17■■□□□ 1.94
SMIM29-208ENST00000495581 CAMTA2O94983 1202 aa27.17■■□□□ 1.94
SMIM29-208ENST00000495581 MYL6BP14649 208 aa27.17■■□□□ 1.94
SMIM29-208ENST00000495581 DUSP27Q5VZP5 1158 aa27.16■■□□□ 1.94
SMIM29-208ENST00000495581 CHMP4AQ9BY43 222 aa27.16■■□□□ 1.94
SMIM29-208ENST00000495581 ZNF652Q9Y2D9 606 aa27.16■■□□□ 1.94
SMIM29-208ENST00000495581 RGL2O15211 777 aa27.15■■□□□ 1.94
SMIM29-208ENST00000495581 NFIXQ14938 502 aa27.15■■□□□ 1.94
SMIM29-208ENST00000495581 CLEC4GQ6UXB4 293 aa27.15■■□□□ 1.94
SMIM29-208ENST00000495581 DDR1Q08345 913 aa27.14■■□□□ 1.94
SMIM29-208ENST00000495581 HDGFL1Q5TGJ6 251 aa27.14■■□□□ 1.94
SMIM29-208ENST00000495581 POLRMTO00411 1230 aaKnown RBP27.13■■□□□ 1.93
SMIM29-208ENST00000495581 KIF6Q6ZMV9 814 aa27.13■■□□□ 1.93
SMIM29-208ENST00000495581 NECTIN2Q92692 538 aa27.13■■□□□ 1.93
SMIM29-208ENST00000495581 TSR2Q969E8 191 aaKnown RBP27.12■■□□□ 1.93
SMIM29-208ENST00000495581 SCN7AQ01118 1682 aa27.11■■□□□ 1.93
SMIM29-208ENST00000495581 PDIA6Q15084 440 aa27.11■■□□□ 1.93
SMIM29-208ENST00000495581 BICDL1Q6ZP65 573 aa27.11■■□□□ 1.93
SMIM29-208ENST00000495581 DDX21Q9NR30 783 aaKnown RBP eCLIP27.11■■□□□ 1.93
SMIM29-208ENST00000495581 ERVV-1B6SEH8 477 aa27.1■■□□□ 1.93
SMIM29-208ENST00000495581 TBC1D9BQ66K14 1250 aa27.1■■□□□ 1.93
SMIM29-208ENST00000495581 NLGN2Q8NFZ4 835 aa27.1■■□□□ 1.93
SMIM29-208ENST00000495581 SETDB2Q96T68 719 aa27.1■■□□□ 1.93
SMIM29-208ENST00000495581 DBF4Q9UBU7 674 aaPredicted RBP27.1■■□□□ 1.93
SMIM29-208ENST00000495581 ELL2O00472 640 aaPredicted RBP27.09■■□□□ 1.93
SMIM29-208ENST00000495581 C8orf58Q8NAV2 365 aa27.09■■□□□ 1.93
SMIM29-208ENST00000495581 MAP3K15Q6ZN16 1313 aa27.09■■□□□ 1.93
SMIM29-208ENST00000495581 SERPINB2P05120 415 aa27.08■■□□□ 1.93
SMIM29-208ENST00000495581 MYH16Q9H6N6 1097 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms