RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 SALL2Q9Y467 1007 aaPredicted RBP17.78■□□□□ 0.44
FDPS-219ENST00000495308 RPS6KA4O75676 772 aa17.77■□□□□ 0.44
FDPS-219ENST00000495308 EIF4A1P60842 406 aaKnown RBP17.77■□□□□ 0.44
FDPS-219ENST00000495308 FLAD1Q8NFF5 587 aa17.77■□□□□ 0.44
FDPS-219ENST00000495308 MTFR1LQ9H019 292 aa17.77■□□□□ 0.44
FDPS-219ENST00000495308 SPON1Q9HCB6 807 aa17.77■□□□□ 0.44
FDPS-219ENST00000495308 STARD3NLO95772 234 aa17.76■□□□□ 0.43
FDPS-219ENST00000495308 SNRPA1P09661 255 aaKnown RBP17.76■□□□□ 0.43
FDPS-219ENST00000495308 USP16Q9Y5T5 823 aa17.76■□□□□ 0.43
FDPS-219ENST00000495308 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
FDPS-219ENST00000495308 TRAPPC3LQ5T215 181 aa17.75■□□□□ 0.43
FDPS-219ENST00000495308 MSL1Q68DK7 614 aa17.75■□□□□ 0.43
FDPS-219ENST00000495308 TEX13AQ9BXU3 409 aaPredicted RBP17.75■□□□□ 0.43
FDPS-219ENST00000495308 BABAM1Q9NWV8 329 aa17.75■□□□□ 0.43
FDPS-219ENST00000495308 SOS1Q07889 1333 aaPredicted RBP17.74■□□□□ 0.43
FDPS-219ENST00000495308 CHL1O00533 1208 aa17.74■□□□□ 0.43
FDPS-219ENST00000495308 A1BGP04217 495 aa17.74■□□□□ 0.43
FDPS-219ENST00000495308 PTGER2P43116 358 aa17.74■□□□□ 0.43
FDPS-219ENST00000495308 CCDC27Q2M243 656 aa17.74■□□□□ 0.43
FDPS-219ENST00000495308 SLC16A10Q8TF71 515 aa17.74■□□□□ 0.43
FDPS-219ENST00000495308 ARHGEF1Q92888 912 aaKnown RBP17.74■□□□□ 0.43
FDPS-219ENST00000495308 COL15A1P39059 1388 aa17.74■□□□□ 0.43
FDPS-219ENST00000495308 GIGYF1O75420 1035 aaPredicted RBP17.73■□□□□ 0.43
FDPS-219ENST00000495308 PIP4K2AP48426 406 aaPredicted RBP17.73■□□□□ 0.43
FDPS-219ENST00000495308 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
FDPS-219ENST00000495308 CFAP44Q96MT7 982 aa17.73■□□□□ 0.43
FDPS-219ENST00000495308 SCN7AQ01118 1682 aa17.73■□□□□ 0.43
FDPS-219ENST00000495308 BCORQ6W2J9 1755 aa17.73■□□□□ 0.43
FDPS-219ENST00000495308 ADRA2BP18089 450 aa17.72■□□□□ 0.43
FDPS-219ENST00000495308 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
FDPS-219ENST00000495308 KRT24Q2M2I5 525 aa17.72■□□□□ 0.43
FDPS-219ENST00000495308 MBIPQ9NS73 344 aa17.72■□□□□ 0.43
FDPS-219ENST00000495308 ZNF330Q9Y3S2 320 aaPredicted RBP17.72■□□□□ 0.43
FDPS-219ENST00000495308 ZNF853P0CG23 659 aa17.71■□□□□ 0.43
FDPS-219ENST00000495308 RFC4P35249 363 aa17.71■□□□□ 0.43
FDPS-219ENST00000495308 GNAI1P63096 354 aa17.71■□□□□ 0.43
FDPS-219ENST00000495308 SGIP1Q9BQI5 828 aa17.71■□□□□ 0.43
FDPS-219ENST00000495308 IFT57Q9NWB7 429 aa17.71■□□□□ 0.43
FDPS-219ENST00000495308 SRP68Q9UHB9 627 aaKnown RBP17.71■□□□□ 0.43
FDPS-219ENST00000495308 EIF5P55010 431 aaKnown RBP17.69■□□□□ 0.42
FDPS-219ENST00000495308 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
FDPS-219ENST00000495308 TSR2Q969E8 191 aaKnown RBP17.69■□□□□ 0.42
FDPS-219ENST00000495308 PPP1R1BQ9UD71 204 aaPredicted RBP17.69■□□□□ 0.42
FDPS-219ENST00000495308 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
FDPS-219ENST00000495308 IL6STP40189 918 aaPredicted RBP17.68■□□□□ 0.42
FDPS-219ENST00000495308 NBPF26B4DH59 902 aa17.67■□□□□ 0.42
FDPS-219ENST00000495308 GYS1P13807 737 aa17.67■□□□□ 0.42
FDPS-219ENST00000495308 POLD1P28340 1107 aa17.67■□□□□ 0.42
FDPS-219ENST00000495308 USPL1Q5W0Q7 1092 aa17.67■□□□□ 0.42
FDPS-219ENST00000495308 NBPF10Q6P3W6 841 aaKnown RBP17.67■□□□□ 0.42
FDPS-219ENST00000495308 NBPF15Q8N660 670 aa17.67■□□□□ 0.42
FDPS-219ENST00000495308 GOLGB1Q14789 3259 aaKnown RBP17.67■□□□□ 0.42
FDPS-219ENST00000495308 AFDNP55196 1824 aaKnown RBP17.66■□□□□ 0.42
FDPS-219ENST00000495308 EIF2S2P20042 333 aaKnown RBP17.66■□□□□ 0.42
FDPS-219ENST00000495308 NECTIN2Q92692 538 aa17.66■□□□□ 0.42
FDPS-219ENST00000495308 ARXQ96QS3 562 aa17.66■□□□□ 0.42
FDPS-219ENST00000495308 NARFQ9UHQ1 456 aa17.66■□□□□ 0.42
FDPS-219ENST00000495308 ZPR1O75312 459 aa17.65■□□□□ 0.42
FDPS-219ENST00000495308 MYL6BP14649 208 aa17.65■□□□□ 0.42
FDPS-219ENST00000495308 WDR63Q8IWG1 891 aa17.65■□□□□ 0.42
FDPS-219ENST00000495308 TBC1D2BQ9UPU7 963 aa17.65■□□□□ 0.42
FDPS-219ENST00000495308 IL16Q14005 1332 aa17.65■□□□□ 0.42
FDPS-219ENST00000495308 NUP98P52948 1817 aa17.65■□□□□ 0.42
FDPS-219ENST00000495308 FKBP8Q14318 412 aa17.64■□□□□ 0.41
FDPS-219ENST00000495308 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
FDPS-219ENST00000495308 NGEFQ8N5V2 710 aa17.64■□□□□ 0.41
FDPS-219ENST00000495308 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
FDPS-219ENST00000495308 A0A087WZG4 1122 aa17.63■□□□□ 0.41
FDPS-219ENST00000495308 ELL2O00472 640 aaPredicted RBP17.63■□□□□ 0.41
FDPS-219ENST00000495308 ANXA1P04083 346 aa17.63■□□□□ 0.41
FDPS-219ENST00000495308 DUSP27Q5VZP5 1158 aa17.63■□□□□ 0.41
FDPS-219ENST00000495308 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
FDPS-219ENST00000495308 BCL2L12Q9HB09 334 aa17.63■□□□□ 0.41
FDPS-219ENST00000495308 ZNF521Q96K83 1311 aa17.63■□□□□ 0.41
FDPS-219ENST00000495308 MMP10P09238 476 aa17.62■□□□□ 0.41
FDPS-219ENST00000495308 PROSER3Q2NL68 480 aa17.62■□□□□ 0.41
FDPS-219ENST00000495308 DZIP3Q86Y13 1208 aaKnown RBP17.62■□□□□ 0.41
FDPS-219ENST00000495308 KLHL34Q8N239 644 aa17.62■□□□□ 0.41
FDPS-219ENST00000495308 NLGN1Q8N2Q7 840 aa17.62■□□□□ 0.41
FDPS-219ENST00000495308 FANCIQ9NVI1 1328 aa17.62■□□□□ 0.41
FDPS-219ENST00000495308 KIF13BQ9NQT8 1826 aa17.61■□□□□ 0.41
FDPS-219ENST00000495308 HOXB7P09629 217 aa17.61■□□□□ 0.41
FDPS-219ENST00000495308 PDIA6Q15084 440 aa17.61■□□□□ 0.41
FDPS-219ENST00000495308 HDGFL1Q5TGJ6 251 aa17.61■□□□□ 0.41
FDPS-219ENST00000495308 TSPYL6Q8N831 410 aa17.61■□□□□ 0.41
FDPS-219ENST00000495308 FHDC1Q9C0D6 1143 aaPredicted RBP17.61■□□□□ 0.41
FDPS-219ENST00000495308 ERBB4Q15303 1308 aa17.61■□□□□ 0.41
FDPS-219ENST00000495308 CAMTA2O94983 1202 aa17.6■□□□□ 0.41
FDPS-219ENST00000495308 NRXN2Q9P2S2 1712 aa17.6■□□□□ 0.41
FDPS-219ENST00000495308 ANKRD36CQ5JPF3 1778 aa17.59■□□□□ 0.41
FDPS-219ENST00000495308 DDR1Q08345 913 aa17.59■□□□□ 0.41
FDPS-219ENST00000495308 CHPF2Q9P2E5 772 aa17.59■□□□□ 0.41
FDPS-219ENST00000495308 UTRNP46939 3433 aa17.59■□□□□ 0.41
FDPS-219ENST00000495308 TTLL7Q6ZT98 887 aa17.58■□□□□ 0.4
FDPS-219ENST00000495308 LRP10Q7Z4F1 713 aa17.58■□□□□ 0.4
FDPS-219ENST00000495308 N4BP2Q86UW6 1770 aaPredicted RBP17.58■□□□□ 0.4
FDPS-219ENST00000495308 KIAA1551Q9HCM1 1747 aa17.58■□□□□ 0.4
FDPS-219ENST00000495308 TM4SF1P30408 202 aa17.57■□□□□ 0.4
FDPS-219ENST00000495308 NFIXQ14938 502 aa17.57■□□□□ 0.4
FDPS-219ENST00000495308 TBC1D9BQ66K14 1250 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms