RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 A1BGP04217 495 aa18.92■□□□□ 0.62
SCAP-213ENST00000494938 SNRPA1P09661 255 aaKnown RBP18.92■□□□□ 0.62
SCAP-213ENST00000494938 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
SCAP-213ENST00000494938 NLGN1Q8N2Q7 840 aa18.92■□□□□ 0.62
SCAP-213ENST00000494938 UBR3Q6ZT12 1888 aa18.91■□□□□ 0.62
SCAP-213ENST00000494938 EIF5P55010 431 aaKnown RBP18.91■□□□□ 0.62
SCAP-213ENST00000494938 EIF4A1P60842 406 aaKnown RBP18.91■□□□□ 0.62
SCAP-213ENST00000494938 TJP1Q07157 1748 aa18.91■□□□□ 0.62
SCAP-213ENST00000494938 APAF1O14727 1248 aa18.9■□□□□ 0.62
SCAP-213ENST00000494938 LMOD3Q0VAK6 560 aa18.9■□□□□ 0.62
SCAP-213ENST00000494938 USP42Q9H9J4 1324 aaKnown RBP18.9■□□□□ 0.62
SCAP-213ENST00000494938 SIPA1L3O60292 1781 aaPredicted RBP18.9■□□□□ 0.62
SCAP-213ENST00000494938 MYH14Q7Z406 1995 aaKnown RBP18.9■□□□□ 0.62
SCAP-213ENST00000494938 CICQ96RK0 1608 aaPredicted RBP18.89■□□□□ 0.62
SCAP-213ENST00000494938 COL5A3P25940 1745 aaPredicted RBP18.89■□□□□ 0.61
SCAP-213ENST00000494938 MMP10P09238 476 aa18.89■□□□□ 0.61
SCAP-213ENST00000494938 FKBP8Q14318 412 aa18.89■□□□□ 0.61
SCAP-213ENST00000494938 MRS2Q9HD23 443 aa18.89■□□□□ 0.61
SCAP-213ENST00000494938 COL24A1Q17RW2 1714 aa18.88■□□□□ 0.61
SCAP-213ENST00000494938 GIGYF1O75420 1035 aaPredicted RBP18.88■□□□□ 0.61
SCAP-213ENST00000494938 BABAM1Q9NWV8 329 aa18.88■□□□□ 0.61
SCAP-213ENST00000494938 NARFQ9UHQ1 456 aa18.88■□□□□ 0.61
SCAP-213ENST00000494938 USPL1Q5W0Q7 1092 aa18.87■□□□□ 0.61
SCAP-213ENST00000494938 UBR2Q8IWV8 1755 aa18.87■□□□□ 0.61
SCAP-213ENST00000494938 KLHL34Q8N239 644 aa18.87■□□□□ 0.61
SCAP-213ENST00000494938 NLGN2Q8NFZ4 835 aa18.87■□□□□ 0.61
SCAP-213ENST00000494938 BCL2L12Q9HB09 334 aa18.87■□□□□ 0.61
SCAP-213ENST00000494938 TSPYL4Q9UJ04 414 aa18.87■□□□□ 0.61
SCAP-213ENST00000494938 CD2APQ9Y5K6 639 aa18.87■□□□□ 0.61
SCAP-213ENST00000494938 CHL1O00533 1208 aa18.86■□□□□ 0.61
SCAP-213ENST00000494938 ZPR1O75312 459 aa18.86■□□□□ 0.61
SCAP-213ENST00000494938 TM4SF1P30408 202 aa18.86■□□□□ 0.61
SCAP-213ENST00000494938 IL6STP40189 918 aaPredicted RBP18.86■□□□□ 0.61
SCAP-213ENST00000494938 COL15A1P39059 1388 aa18.85■□□□□ 0.61
SCAP-213ENST00000494938 NBPF26B4DH59 902 aa18.85■□□□□ 0.61
SCAP-213ENST00000494938 PIP4K2AP48426 406 aaPredicted RBP18.85■□□□□ 0.61
SCAP-213ENST00000494938 NBPF10Q6P3W6 841 aaKnown RBP18.85■□□□□ 0.61
SCAP-213ENST00000494938 NBPF15Q8N660 670 aa18.85■□□□□ 0.61
SCAP-213ENST00000494938 VIRMAQ69YN4 1812 aaKnown RBP18.85■□□□□ 0.61
SCAP-213ENST00000494938 A0A087WZG4 1122 aa18.84■□□□□ 0.61
SCAP-213ENST00000494938 DDR1Q08345 913 aa18.83■□□□□ 0.6
SCAP-213ENST00000494938 TBC1D2BQ9UPU7 963 aa18.83■□□□□ 0.6
SCAP-213ENST00000494938 ZNF853P0CG23 659 aa18.81■□□□□ 0.6
SCAP-213ENST00000494938 NFIXQ14938 502 aa18.81■□□□□ 0.6
SCAP-213ENST00000494938 ZNF330Q9Y3S2 320 aaPredicted RBP18.81■□□□□ 0.6
SCAP-213ENST00000494938 LAS1LQ9Y4W2 734 aaKnown RBP18.81■□□□□ 0.6
SCAP-213ENST00000494938 PARP3Q9Y6F1 533 aa18.81■□□□□ 0.6
SCAP-213ENST00000494938 DLG5Q8TDM6 1919 aa18.8■□□□□ 0.6
SCAP-213ENST00000494938 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
SCAP-213ENST00000494938 POLRMTO00411 1230 aaKnown RBP18.8■□□□□ 0.6
SCAP-213ENST00000494938 CAMTA2O94983 1202 aa18.8■□□□□ 0.6
SCAP-213ENST00000494938 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
SCAP-213ENST00000494938 UTRNP46939 3433 aa18.79■□□□□ 0.6
SCAP-213ENST00000494938 DCAF8L1A6NGE4 600 aa18.78■□□□□ 0.6
SCAP-213ENST00000494938 KRT24Q2M2I5 525 aa18.78■□□□□ 0.6
SCAP-213ENST00000494938 DZIP3Q86Y13 1208 aaKnown RBP18.78■□□□□ 0.6
SCAP-213ENST00000494938 GOLGB1Q14789 3259 aaKnown RBP18.77■□□□□ 0.6
SCAP-213ENST00000494938 TBC1D9BQ66K14 1250 aa18.77■□□□□ 0.6
SCAP-213ENST00000494938 PDIA6Q15084 440 aa18.76■□□□□ 0.59
SCAP-213ENST00000494938 GPR162Q16538 588 aa18.76■□□□□ 0.59
SCAP-213ENST00000494938 CCDC27Q2M243 656 aa18.76■□□□□ 0.59
SCAP-213ENST00000494938 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
SCAP-213ENST00000494938 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
SCAP-213ENST00000494938 MBIPQ9NS73 344 aa18.76■□□□□ 0.59
SCAP-213ENST00000494938 SERPINB2P05120 415 aa18.75■□□□□ 0.59
SCAP-213ENST00000494938 EIF2S2P20042 333 aaKnown RBP18.75■□□□□ 0.59
SCAP-213ENST00000494938 TGFB2P61812 414 aa18.75■□□□□ 0.59
SCAP-213ENST00000494938 BICDL1Q6ZP65 573 aa18.75■□□□□ 0.59
SCAP-213ENST00000494938 WWC1Q8IX03 1113 aa18.75■□□□□ 0.59
SCAP-213ENST00000494938 FAM9BQ8IZU0 186 aa18.75■□□□□ 0.59
SCAP-213ENST00000494938 IFT57Q9NWB7 429 aa18.75■□□□□ 0.59
SCAP-213ENST00000494938 A0A0G2JLW4 131 aa18.74■□□□□ 0.59
SCAP-213ENST00000494938 YBX3P16989 372 aaKnown RBP eCLIP18.74■□□□□ 0.59
SCAP-213ENST00000494938 CALD1Q05682 793 aaKnown RBP18.74■□□□□ 0.59
SCAP-213ENST00000494938 LRP10Q7Z4F1 713 aa18.74■□□□□ 0.59
SCAP-213ENST00000494938 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
SCAP-213ENST00000494938 C4AP0C0L4 1744 aa18.74■□□□□ 0.59
SCAP-213ENST00000494938 KDM3BQ7LBC6 1761 aa18.73■□□□□ 0.59
SCAP-213ENST00000494938 MYL6BP14649 208 aa18.73■□□□□ 0.59
SCAP-213ENST00000494938 KCNA3P22001 575 aa18.73■□□□□ 0.59
SCAP-213ENST00000494938 GNAI1P63096 354 aa18.73■□□□□ 0.59
SCAP-213ENST00000494938 CLEC4GQ6UXB4 293 aa18.73■□□□□ 0.59
SCAP-213ENST00000494938 C10orf71Q711Q0 1435 aa18.73■□□□□ 0.59
SCAP-213ENST00000494938 ERBB4Q15303 1308 aa18.73■□□□□ 0.59
SCAP-213ENST00000494938 DPEP1P16444 411 aa18.72■□□□□ 0.59
SCAP-213ENST00000494938 HLFQ16534 295 aa18.72■□□□□ 0.59
SCAP-213ENST00000494938 PROSER3Q2NL68 480 aa18.72■□□□□ 0.59
SCAP-213ENST00000494938 TTLL7Q6ZT98 887 aa18.72■□□□□ 0.59
SCAP-213ENST00000494938 PELP1Q8IZL8 1130 aaKnown RBP18.72■□□□□ 0.59
SCAP-213ENST00000494938 RGL2O15211 777 aa18.71■□□□□ 0.59
SCAP-213ENST00000494938 DUSP27Q5VZP5 1158 aa18.71■□□□□ 0.59
SCAP-213ENST00000494938 NECTIN2Q92692 538 aa18.71■□□□□ 0.59
SCAP-213ENST00000494938 SETDB2Q96T68 719 aa18.71■□□□□ 0.59
SCAP-213ENST00000494938 ERVV-1B6SEH8 477 aa18.7■□□□□ 0.58
SCAP-213ENST00000494938 ANXA1P04083 346 aa18.7■□□□□ 0.58
SCAP-213ENST00000494938 HOXB7P09629 217 aa18.69■□□□□ 0.58
SCAP-213ENST00000494938 C8orf58Q8NAV2 365 aa18.69■□□□□ 0.58
SCAP-213ENST00000494938 WWC3Q9ULE0 1092 aa18.69■□□□□ 0.58
SCAP-213ENST00000494938 SALL2Q9Y467 1007 aaPredicted RBP18.69■□□□□ 0.58
SCAP-213ENST00000494938 PXDNLA1KZ92 1463 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms