RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 OCSTAMPQ9BR26 566 aa10.75□□□□□ -0.69
RPGR-210ENST00000494841 RPGRIP1LQ68CZ1 1315 aa10.75□□□□□ -0.69
RPGR-210ENST00000494841 ADGRF5Q8IZF2 1346 aa10.75□□□□□ -0.69
RPGR-210ENST00000494841 CLSPNQ9HAW4 1339 aa10.75□□□□□ -0.69
RPGR-210ENST00000494841 PROSER2Q86WR7 435 aaPredicted RBP10.74□□□□□ -0.69
RPGR-210ENST00000494841 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.74□□□□□ -0.69
RPGR-210ENST00000494841 SCAF11Q99590 1463 aaKnown RBP10.74□□□□□ -0.69
RPGR-210ENST00000494841 POLR1AO95602 1720 aaPredicted RBP10.73□□□□□ -0.69
RPGR-210ENST00000494841 IFT172Q9UG01 1749 aa10.73□□□□□ -0.69
RPGR-210ENST00000494841 RGS20O76081 388 aa10.73□□□□□ -0.69
RPGR-210ENST00000494841 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
RPGR-210ENST00000494841 SH3RF1Q7Z6J0 888 aa10.73□□□□□ -0.69
RPGR-210ENST00000494841 FNBP4Q8N3X1 1017 aaPredicted RBP10.73□□□□□ -0.69
RPGR-210ENST00000494841 SLC26A8Q96RN1 970 aa10.73□□□□□ -0.69
RPGR-210ENST00000494841 GPSM3Q9Y4H4 160 aa10.73□□□□□ -0.69
RPGR-210ENST00000494841 TONSLQ96HA7 1378 aa10.73□□□□□ -0.69
RPGR-210ENST00000494841 NEURL4Q96JN8 1562 aa10.73□□□□□ -0.69
RPGR-210ENST00000494841 FBXO45P0C2W1 286 aa10.72□□□□□ -0.69
RPGR-210ENST00000494841 ZNF697Q5TEC3 545 aa10.72□□□□□ -0.69
RPGR-210ENST00000494841 ZNF598Q86UK7 904 aaKnown RBP10.72□□□□□ -0.69
RPGR-210ENST00000494841 ZMYND15Q9H091 742 aa10.72□□□□□ -0.69
RPGR-210ENST00000494841 ZBBXA8MT70 800 aa10.71□□□□□ -0.69
RPGR-210ENST00000494841 NPHP4O75161 1426 aaPredicted RBP10.71□□□□□ -0.69
RPGR-210ENST00000494841 PTK2Q05397 1052 aa10.71□□□□□ -0.69
RPGR-210ENST00000494841 BPHLQ86WA6 291 aaPredicted RBP10.71□□□□□ -0.69
RPGR-210ENST00000494841 ARHGAP9Q9BRR9 750 aa10.71□□□□□ -0.69
RPGR-210ENST00000494841 PLEKHG1Q9ULL1 1385 aa10.7□□□□□ -0.7
RPGR-210ENST00000494841 NR1H3Q13133 447 aa10.7□□□□□ -0.7
RPGR-210ENST00000494841 RC3H1Q5TC82 1133 aaKnown RBP10.7□□□□□ -0.7
RPGR-210ENST00000494841 ERICH6Q7L0X2 663 aa10.7□□□□□ -0.7
RPGR-210ENST00000494841 IQGAP1P46940 1657 aa10.69□□□□□ -0.7
RPGR-210ENST00000494841 MED14O60244 1454 aa10.69□□□□□ -0.7
RPGR-210ENST00000494841 MAGEB6P1A0A0J9YX57 407 aa10.69□□□□□ -0.7
RPGR-210ENST00000494841 WNT7AO00755 349 aa10.69□□□□□ -0.7
RPGR-210ENST00000494841 AGERQ15109 404 aa10.69□□□□□ -0.7
RPGR-210ENST00000494841 NBPF8Q3BBV2 869 aa10.69□□□□□ -0.7
RPGR-210ENST00000494841 CFAP70Q5T0N1 1121 aa10.69□□□□□ -0.7
RPGR-210ENST00000494841 C1QTNF2Q9BXJ5 285 aa10.69□□□□□ -0.7
RPGR-210ENST00000494841 CARD14Q9BXL6 1004 aa10.69□□□□□ -0.7
RPGR-210ENST00000494841 VAC14Q08AM6 782 aa10.68□□□□□ -0.7
RPGR-210ENST00000494841 TMEM132EQ6IEE7 984 aa10.68□□□□□ -0.7
RPGR-210ENST00000494841 ADAM32Q8TC27 787 aa10.68□□□□□ -0.7
RPGR-210ENST00000494841 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
RPGR-210ENST00000494841 ADAMTS13Q76LX8 1427 aa10.67□□□□□ -0.7
RPGR-210ENST00000494841 NRXN3Q9Y4C0 1643 aa10.67□□□□□ -0.7
RPGR-210ENST00000494841 WASHC4Q2M389 1173 aa10.67□□□□□ -0.7
RPGR-210ENST00000494841 ERFEQ4G0M1 354 aa10.67□□□□□ -0.7
RPGR-210ENST00000494841 WWC1Q8IX03 1113 aa10.67□□□□□ -0.7
RPGR-210ENST00000494841 EHBP1Q8NDI1 1231 aa10.67□□□□□ -0.7
RPGR-210ENST00000494841 C14orf93Q9H972 538 aaKnown RBP10.67□□□□□ -0.7
RPGR-210ENST00000494841 TBX22Q9Y458 520 aa10.67□□□□□ -0.7
RPGR-210ENST00000494841 MYOM2P54296 1465 aa10.67□□□□□ -0.7
RPGR-210ENST00000494841 ALKQ9UM73 1620 aa10.66□□□□□ -0.7
RPGR-210ENST00000494841 TRAK2O60296 914 aa10.66□□□□□ -0.7
RPGR-210ENST00000494841 VARSP26640 1264 aaKnown RBP10.66□□□□□ -0.7
RPGR-210ENST00000494841 NBPF1Q3BBV0 1214 aa10.66□□□□□ -0.7
RPGR-210ENST00000494841 MRGPRX2Q96LB1 330 aa10.66□□□□□ -0.7
RPGR-210ENST00000494841 NRXN1Q9ULB1 1477 aa10.66□□□□□ -0.7
RPGR-210ENST00000494841 PIK3C2GO75747 1445 aa10.66□□□□□ -0.7
RPGR-210ENST00000494841 METP08581 1390 aa10.65□□□□□ -0.7
RPGR-210ENST00000494841 SETBP1Q9Y6X0 1596 aa10.65□□□□□ -0.7
RPGR-210ENST00000494841 POM121CA8CG34 1229 aa10.65□□□□□ -0.7
RPGR-210ENST00000494841 TRIM67Q6ZTA4 783 aa10.65□□□□□ -0.7
RPGR-210ENST00000494841 ZBTB33Q86T24 672 aa10.65□□□□□ -0.7
RPGR-210ENST00000494841 STK26Q9P289 416 aa10.65□□□□□ -0.7
RPGR-210ENST00000494841 PRAG1Q86YV5 1406 aa10.65□□□□□ -0.7
RPGR-210ENST00000494841 ZNF335Q9H4Z2 1342 aaPredicted RBP10.64□□□□□ -0.71
RPGR-210ENST00000494841 GDF9O60383 454 aa10.64□□□□□ -0.71
RPGR-210ENST00000494841 FOXC1Q12948 553 aa10.64□□□□□ -0.71
RPGR-210ENST00000494841 TRMT44Q8IYL2 757 aaKnown RBP10.64□□□□□ -0.71
RPGR-210ENST00000494841 ZNF330Q9Y3S2 320 aaPredicted RBP10.64□□□□□ -0.71
RPGR-210ENST00000494841 SIAH2O43255 324 aa10.63□□□□□ -0.71
RPGR-210ENST00000494841 FAM174AQ8TBP5 190 aa10.63□□□□□ -0.71
RPGR-210ENST00000494841 AMOTL2Q9Y2J4 779 aa10.63□□□□□ -0.71
RPGR-210ENST00000494841 SETD1AO15047 1707 aaKnown RBP10.63□□□□□ -0.71
RPGR-210ENST00000494841 STRCP1A6NGW2 1772 aa10.62□□□□□ -0.71
RPGR-210ENST00000494841 PTPRUQ92729 1446 aa10.62□□□□□ -0.71
RPGR-210ENST00000494841 TLL2Q9Y6L7 1015 aa10.62□□□□□ -0.71
RPGR-210ENST00000494841 CHD2O14647 1828 aaKnown RBP10.62□□□□□ -0.71
RPGR-210ENST00000494841 TNFRSF10AO00220 468 aa10.61□□□□□ -0.71
RPGR-210ENST00000494841 KCNA6P17658 529 aa10.61□□□□□ -0.71
RPGR-210ENST00000494841 ASXL1Q8IXJ9 1541 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 TRPM1Q7Z4N2 1603 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 EIF4G2P78344 907 aaKnown RBP eCLIP10.6□□□□□ -0.71
RPGR-210ENST00000494841 PRR20EP86478 221 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 PRR20CP86479 221 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 PRR20DP86480 221 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 PRR20BP86481 221 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 PRR20AP86496 221 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 ADAMTS19Q8TE59 1207 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 SLC10A4Q96EP9 437 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 TRAK1Q9UPV9 953 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 PCDHB9Q9Y5E1 797 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 DIP2AQ14689 1571 aa10.6□□□□□ -0.71
RPGR-210ENST00000494841 KIAA1210Q9ULL0 1709 aa10.59□□□□□ -0.71
RPGR-210ENST00000494841 WAPLQ7Z5K2 1190 aa10.59□□□□□ -0.71
RPGR-210ENST00000494841 MAP4K5Q9Y4K4 846 aa10.59□□□□□ -0.71
RPGR-210ENST00000494841 ROCK2O75116 1388 aaKnown RBP10.59□□□□□ -0.71
RPGR-210ENST00000494841 YTHDC2Q9H6S0 1430 aaKnown RBP10.58□□□□□ -0.72
RPGR-210ENST00000494841 LAMC1P11047 1609 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms