RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 TSPAN10Q9H1Z9 355 aaPredicted RBP4.32□□□□□ -1.72
CDC42EP3-205ENST00000494083 NOD1Q9Y239 953 aa4.32□□□□□ -1.72
CDC42EP3-205ENST00000494083 C2CD2LO14523 706 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 ZBTB7BO15156 539 aaPredicted RBP4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 ATP9BO43861 1147 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 BNIP3LO60238 219 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 MX2P20592 715 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 SRSF11Q05519 484 aaKnown RBP4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 CRTC2Q53ET0 693 aaPredicted RBP4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 WDR44Q5JSH3 913 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 ACDQ96AP0 544 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 MKRN1Q9UHC7 482 aaKnown RBP4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 MAFBQ9Y5Q3 323 aaPredicted RBP4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 MROH2BQ7Z745 1585 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 PALM3A6NDB9 673 aaPredicted RBP4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 MTFR1Q15390 333 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 SIRT1Q96EB6 747 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 SCHIP1Q9P0W5 487 aaPredicted RBP4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 SFI1A8K8P3 1242 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 ARHGEF15O94989 841 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 CELA2BP08218 269 aaPredicted RBP4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 CCDC102BQ68D86 513 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 MBIPQ9NS73 344 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 CABP1Q9NZU7 370 aa4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 ZNF777Q9ULD5 760 aaPredicted RBP4.31□□□□□ -1.72
CDC42EP3-205ENST00000494083 DKK1O94907 266 aa4.3□□□□□ -1.72
CDC42EP3-205ENST00000494083 ARSJQ5FYB0 599 aaPredicted RBP4.3□□□□□ -1.72
CDC42EP3-205ENST00000494083 SLC4A9Q96Q91 983 aa4.3□□□□□ -1.72
CDC42EP3-205ENST00000494083 NIFKQ9BYG3 293 aaKnown RBP4.3□□□□□ -1.72
CDC42EP3-205ENST00000494083 ABCA5Q8WWZ7 1642 aa4.3□□□□□ -1.72
CDC42EP3-205ENST00000494083 CTBSQ01459 385 aa4.3□□□□□ -1.72
CDC42EP3-205ENST00000494083 SLC9A9Q8IVB4 645 aa4.3□□□□□ -1.72
CDC42EP3-205ENST00000494083 NFATC2IPQ8NCF5 419 aa4.3□□□□□ -1.72
CDC42EP3-205ENST00000494083 CALR3Q96L12 384 aaKnown RBP4.3□□□□□ -1.72
CDC42EP3-205ENST00000494083 H7C1W4 665 aa4.3□□□□□ -1.72
CDC42EP3-205ENST00000494083 L3MBTL2Q969R5 705 aa4.3□□□□□ -1.72
CDC42EP3-205ENST00000494083 WWC1Q8IX03 1113 aa4.29□□□□□ -1.72
CDC42EP3-205ENST00000494083 TOP2BQ02880 1626 aa4.29□□□□□ -1.72
CDC42EP3-205ENST00000494083 FAM181BA6NEQ2 426 aa4.29□□□□□ -1.72
CDC42EP3-205ENST00000494083 SHISA8B8ZZ34 492 aa4.29□□□□□ -1.72
CDC42EP3-205ENST00000494083 CD33P20138 364 aa4.29□□□□□ -1.72
CDC42EP3-205ENST00000494083 ZCCHC2Q9C0B9 1178 aaKnown RBP4.29□□□□□ -1.72
CDC42EP3-205ENST00000494083 NDFIP2Q9NV92 336 aa4.29□□□□□ -1.72
CDC42EP3-205ENST00000494083 C21orf2O43822 256 aa4.29□□□□□ -1.72
CDC42EP3-205ENST00000494083 TRERF1Q96PN7 1200 aa4.29□□□□□ -1.72
CDC42EP3-205ENST00000494083 PPP1R12CQ9BZL4 782 aa4.29□□□□□ -1.72
CDC42EP3-205ENST00000494083 CSB-PGBD3P0DP91 1061 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 GTF2E1P29083 439 aaPredicted RBP4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 FOXK2Q01167 660 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 PGBD3Q8N328 593 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 TRIM52Q96A61 297 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 CRISPLD1Q9H336 500 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 STRN4Q9NRL3 753 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 ZNF232Q9UNY5 417 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 ERICH3Q5RHP9 1530 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 A0A1W2PNR3 127 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 RASA1P20936 1047 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 SNRPNP63162 240 aaKnown RBP4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 CDCA8Q53HL2 280 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 PLEKHM2Q8IWE5 1019 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 HSH2DQ96JZ2 352 aa4.28□□□□□ -1.72
CDC42EP3-205ENST00000494083 EFHC2Q5JST6 749 aa4.28□□□□□ -1.73
CDC42EP3-205ENST00000494083 MAP3K1Q13233 1512 aa4.27□□□□□ -1.73
CDC42EP3-205ENST00000494083 LMOD1P29536 600 aaPredicted RBP4.27□□□□□ -1.73
CDC42EP3-205ENST00000494083 IRS1P35568 1242 aa4.27□□□□□ -1.73
CDC42EP3-205ENST00000494083 OXCT2Q9BYC2 517 aaPredicted RBP4.27□□□□□ -1.73
CDC42EP3-205ENST00000494083 EML1O00423 815 aa4.27□□□□□ -1.73
CDC42EP3-205ENST00000494083 CDK2AP1O14519 115 aa4.27□□□□□ -1.73
CDC42EP3-205ENST00000494083 FGFR3P22607 806 aa4.27□□□□□ -1.73
CDC42EP3-205ENST00000494083 RFX1P22670 979 aa4.27□□□□□ -1.73
CDC42EP3-205ENST00000494083 FOXR1Q6PIV2 292 aa4.27□□□□□ -1.73
CDC42EP3-205ENST00000494083 RAB44Q7Z6P3 723 aaPredicted RBP4.27□□□□□ -1.73
CDC42EP3-205ENST00000494083 MAPTP10636 758 aaKnown RBP4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 NBPF1Q3BBV0 1214 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 CFAP70Q5T0N1 1121 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 KANK4Q5T7N3 995 aaPredicted RBP4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 LRRC69Q6ZNQ3 347 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 ZIC5Q96T25 663 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 CNTNAP5Q8WYK1 1306 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 A6NJR5 290 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 NOS2P35228 1153 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 BICDL1Q6ZP65 573 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 SIX5Q8N196 739 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 ZNF280CQ8ND82 737 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 CHMP7Q8WUX9 453 aaPredicted RBP4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 C7orf43Q8WVR3 580 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 GMCL1Q96IK5 515 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 TIMELESSQ9UNS1 1208 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 HCN4Q9Y3Q4 1203 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 BAZ1BQ9UIG0 1483 aaKnown RBP4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 KDM5BQ9UGL1 1544 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 KHNYNO15037 678 aaKnown RBP4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 PCBP4P57723 403 aaKnown RBP4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 DPYDQ12882 1025 aa4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 ATXN7L1Q9ULK2 861 aaPredicted RBP4.26□□□□□ -1.73
CDC42EP3-205ENST00000494083 ARID3CA6NKF2 412 aa4.25□□□□□ -1.73
CDC42EP3-205ENST00000494083 NEURL1BA8MQ27 555 aa4.25□□□□□ -1.73
CDC42EP3-205ENST00000494083 BMP4P12644 408 aa4.25□□□□□ -1.73
CDC42EP3-205ENST00000494083 PTK7Q13308 1070 aa4.25□□□□□ -1.73
CDC42EP3-205ENST00000494083 KLF15Q9UIH9 416 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms