RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 GIGYF1O75420 1035 aaPredicted RBP18.8■□□□□ 0.6
SRGAP3-208ENST00000490348 MBIPQ9NS73 344 aa18.8■□□□□ 0.6
SRGAP3-208ENST00000490348 CCDC87Q9NVE4 849 aa18.8■□□□□ 0.6
SRGAP3-208ENST00000490348 IFT57Q9NWB7 429 aa18.8■□□□□ 0.6
SRGAP3-208ENST00000490348 ZBTB1Q9Y2K1 713 aa18.8■□□□□ 0.6
SRGAP3-208ENST00000490348 RPS6KA4O75676 772 aa18.79■□□□□ 0.6
SRGAP3-208ENST00000490348 ZBTB7AO95365 584 aa18.79■□□□□ 0.6
SRGAP3-208ENST00000490348 SSFA2P28290 1259 aa18.79■□□□□ 0.6
SRGAP3-208ENST00000490348 KRT24Q2M2I5 525 aa18.79■□□□□ 0.6
SRGAP3-208ENST00000490348 GOLGB1Q14789 3259 aaKnown RBP18.79■□□□□ 0.6
SRGAP3-208ENST00000490348 STARD3NLO95772 234 aa18.78■□□□□ 0.6
SRGAP3-208ENST00000490348 TEX13AQ9BXU3 409 aaPredicted RBP18.78■□□□□ 0.6
SRGAP3-208ENST00000490348 RTCBQ9Y3I0 505 aaKnown RBP18.78■□□□□ 0.6
SRGAP3-208ENST00000490348 ZNF521Q96K83 1311 aa18.77■□□□□ 0.6
SRGAP3-208ENST00000490348 A1BGP04217 495 aa18.77■□□□□ 0.6
SRGAP3-208ENST00000490348 CALD1Q05682 793 aaKnown RBP18.77■□□□□ 0.6
SRGAP3-208ENST00000490348 SOS1Q07889 1333 aaPredicted RBP18.77■□□□□ 0.59
SRGAP3-208ENST00000490348 PIP4K2AP48426 406 aaPredicted RBP18.76■□□□□ 0.59
SRGAP3-208ENST00000490348 GNAI1P63096 354 aa18.76■□□□□ 0.59
SRGAP3-208ENST00000490348 FLAD1Q8NFF5 587 aa18.76■□□□□ 0.59
SRGAP3-208ENST00000490348 ARHGEF1Q92888 912 aaKnown RBP18.76■□□□□ 0.59
SRGAP3-208ENST00000490348 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
SRGAP3-208ENST00000490348 CANXP27824 592 aaKnown RBP18.75■□□□□ 0.59
SRGAP3-208ENST00000490348 LAMB4A4D0S4 1761 aa18.75■□□□□ 0.59
SRGAP3-208ENST00000490348 C4AP0C0L4 1744 aa18.75■□□□□ 0.59
SRGAP3-208ENST00000490348 IL16Q14005 1332 aa18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 NBPF26B4DH59 902 aa18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 MSH5O43196 834 aa18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 ADRA2BP18089 450 aa18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 TRAPPC3LQ5T215 181 aa18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 NBPF10Q6P3W6 841 aaKnown RBP18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 WDR63Q8IWG1 891 aa18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 NBPF15Q8N660 670 aa18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 TSR2Q969E8 191 aaKnown RBP18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 MTFR1LQ9H019 292 aa18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 ATF5Q9Y2D1 282 aaPredicted RBP18.74■□□□□ 0.59
SRGAP3-208ENST00000490348 PTGER2P43116 358 aa18.73■□□□□ 0.59
SRGAP3-208ENST00000490348 EIF5P55010 431 aaKnown RBP18.73■□□□□ 0.59
SRGAP3-208ENST00000490348 SLC16A10Q8TF71 515 aa18.73■□□□□ 0.59
SRGAP3-208ENST00000490348 SGIP1Q9BQI5 828 aa18.73■□□□□ 0.59
SRGAP3-208ENST00000490348 UTRNP46939 3433 aa18.73■□□□□ 0.59
SRGAP3-208ENST00000490348 LRP5O75197 1615 aa18.72■□□□□ 0.59
SRGAP3-208ENST00000490348 COL15A1P39059 1388 aa18.72■□□□□ 0.59
SRGAP3-208ENST00000490348 COL24A1Q17RW2 1714 aa18.72■□□□□ 0.59
SRGAP3-208ENST00000490348 MSL1Q68DK7 614 aa18.72■□□□□ 0.59
SRGAP3-208ENST00000490348 IL6STP40189 918 aaPredicted RBP18.71■□□□□ 0.59
SRGAP3-208ENST00000490348 SPON1Q9HCB6 807 aa18.71■□□□□ 0.59
SRGAP3-208ENST00000490348 SRP68Q9UHB9 627 aaKnown RBP18.71■□□□□ 0.59
SRGAP3-208ENST00000490348 RFC4P35249 363 aa18.7■□□□□ 0.58
SRGAP3-208ENST00000490348 C8orf58Q8NAV2 365 aa18.7■□□□□ 0.58
SRGAP3-208ENST00000490348 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
SRGAP3-208ENST00000490348 FANCIQ9NVI1 1328 aa18.7■□□□□ 0.58
SRGAP3-208ENST00000490348 GYS1P13807 737 aa18.69■□□□□ 0.58
SRGAP3-208ENST00000490348 PDIA6Q15084 440 aa18.69■□□□□ 0.58
SRGAP3-208ENST00000490348 DUSP27Q5VZP5 1158 aa18.69■□□□□ 0.58
SRGAP3-208ENST00000490348 EIF2S2P20042 333 aaKnown RBP18.68■□□□□ 0.58
SRGAP3-208ENST00000490348 TSPYL6Q8N831 410 aa18.68■□□□□ 0.58
SRGAP3-208ENST00000490348 HOXB7P09629 217 aa18.68■□□□□ 0.58
SRGAP3-208ENST00000490348 PROSER3Q2NL68 480 aa18.68■□□□□ 0.58
SRGAP3-208ENST00000490348 LRP10Q7Z4F1 713 aa18.68■□□□□ 0.58
SRGAP3-208ENST00000490348 NECTIN2Q92692 538 aa18.68■□□□□ 0.58
SRGAP3-208ENST00000490348 ZNF330Q9Y3S2 320 aaPredicted RBP18.68■□□□□ 0.58
SRGAP3-208ENST00000490348 ELL2O00472 640 aaPredicted RBP18.67■□□□□ 0.58
SRGAP3-208ENST00000490348 BCL2L12Q9HB09 334 aa18.67■□□□□ 0.58
SRGAP3-208ENST00000490348 NARFQ9UHQ1 456 aa18.67■□□□□ 0.58
SRGAP3-208ENST00000490348 FKBP8Q14318 412 aa18.66■□□□□ 0.58
SRGAP3-208ENST00000490348 USPL1Q5W0Q7 1092 aa18.66■□□□□ 0.58
SRGAP3-208ENST00000490348 TBC1D2BQ9UPU7 963 aa18.66■□□□□ 0.58
SRGAP3-208ENST00000490348 ANXA1P04083 346 aa18.65■□□□□ 0.58
SRGAP3-208ENST00000490348 MYL6BP14649 208 aa18.65■□□□□ 0.58
SRGAP3-208ENST00000490348 ERBB4Q15303 1308 aa18.65■□□□□ 0.58
SRGAP3-208ENST00000490348 HDGFL1Q5TGJ6 251 aa18.64■□□□□ 0.58
SRGAP3-208ENST00000490348 A0A087WZG4 1122 aa18.64■□□□□ 0.57
SRGAP3-208ENST00000490348 ZPR1O75312 459 aa18.64■□□□□ 0.57
SRGAP3-208ENST00000490348 CAMTA2O94983 1202 aa18.64■□□□□ 0.57
SRGAP3-208ENST00000490348 CDCA7LQ96GN5 454 aa18.64■□□□□ 0.57
SRGAP3-208ENST00000490348 CHPF2Q9P2E5 772 aa18.64■□□□□ 0.57
SRGAP3-208ENST00000490348 SCN7AQ01118 1682 aa18.63■□□□□ 0.57
SRGAP3-208ENST00000490348 GOLGA2Q08379 1002 aa18.63■□□□□ 0.57
SRGAP3-208ENST00000490348 DZIP3Q86Y13 1208 aaKnown RBP18.63■□□□□ 0.57
SRGAP3-208ENST00000490348 EXOSC9Q06265 439 aaKnown RBP18.62■□□□□ 0.57
SRGAP3-208ENST00000490348 TTLL7Q6ZT98 887 aa18.62■□□□□ 0.57
SRGAP3-208ENST00000490348 NLGN1Q8N2Q7 840 aa18.62■□□□□ 0.57
SRGAP3-208ENST00000490348 MYH16Q9H6N6 1097 aa18.62■□□□□ 0.57
SRGAP3-208ENST00000490348 MMP10P09238 476 aa18.61■□□□□ 0.57
SRGAP3-208ENST00000490348 HNRNPUQ00839 825 aaKnown RBP eCLIP18.61■□□□□ 0.57
SRGAP3-208ENST00000490348 SLFN5Q08AF3 891 aa18.61■□□□□ 0.57
SRGAP3-208ENST00000490348 TWISTNBQ3B726 338 aaPredicted RBP18.61■□□□□ 0.57
SRGAP3-208ENST00000490348 ARXQ96QS3 562 aa18.61■□□□□ 0.57
SRGAP3-208ENST00000490348 DDX21Q9NR30 783 aaKnown RBP eCLIP18.61■□□□□ 0.57
SRGAP3-208ENST00000490348 BCORQ6W2J9 1755 aa18.61■□□□□ 0.57
SRGAP3-208ENST00000490348 POLD1P28340 1107 aa18.6■□□□□ 0.57
SRGAP3-208ENST00000490348 DDR1Q08345 913 aa18.6■□□□□ 0.57
SRGAP3-208ENST00000490348 E9PSI1 815 aa18.59■□□□□ 0.57
SRGAP3-208ENST00000490348 TM4SF1P30408 202 aa18.59■□□□□ 0.57
SRGAP3-208ENST00000490348 TRMT2AQ8IZ69 625 aaKnown RBP18.59■□□□□ 0.57
SRGAP3-208ENST00000490348 VAMP4O75379 141 aa18.59■□□□□ 0.57
SRGAP3-208ENST00000490348 NFIXQ14938 502 aa18.59■□□□□ 0.57
SRGAP3-208ENST00000490348 HLFQ16534 295 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms