RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 R3HDM1Q15032 1099 aaKnown RBP22.7■■□□□ 1.22
ERCC3-207ENST00000490062 CCDC87Q9NVE4 849 aa22.7■■□□□ 1.22
ERCC3-207ENST00000490062 TFCP2L1Q9NZI6 479 aa22.7■■□□□ 1.22
ERCC3-207ENST00000490062 SOS1Q07889 1333 aaPredicted RBP22.7■■□□□ 1.22
ERCC3-207ENST00000490062 PNPLA7Q6ZV29 1317 aa22.7■■□□□ 1.22
ERCC3-207ENST00000490062 USP16Q9Y5T5 823 aa22.69■■□□□ 1.22
ERCC3-207ENST00000490062 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
ERCC3-207ENST00000490062 LAS1LQ9Y4W2 734 aaKnown RBP22.68■■□□□ 1.22
ERCC3-207ENST00000490062 ERBB4Q15303 1308 aa22.67■■□□□ 1.22
ERCC3-207ENST00000490062 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
ERCC3-207ENST00000490062 PRAMEF22A3QJZ6 481 aa22.67■■□□□ 1.22
ERCC3-207ENST00000490062 GNPATO15228 680 aa22.67■■□□□ 1.22
ERCC3-207ENST00000490062 RTCBQ9Y3I0 505 aaKnown RBP22.67■■□□□ 1.22
ERCC3-207ENST00000490062 AMIGO3Q86WK7 504 aa22.66■■□□□ 1.22
ERCC3-207ENST00000490062 SLC16A10Q8TF71 515 aa22.66■■□□□ 1.22
ERCC3-207ENST00000490062 ZBTB1Q9Y2K1 713 aa22.66■■□□□ 1.22
ERCC3-207ENST00000490062 GOLGA2Q08379 1002 aa22.65■■□□□ 1.22
ERCC3-207ENST00000490062 COL24A1Q17RW2 1714 aa22.65■■□□□ 1.22
ERCC3-207ENST00000490062 FANCIQ9NVI1 1328 aa22.64■■□□□ 1.22
ERCC3-207ENST00000490062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.64■■□□□ 1.21
ERCC3-207ENST00000490062 PSDA5PKW4 1024 aaPredicted RBP22.64■■□□□ 1.21
ERCC3-207ENST00000490062 IL6STP40189 918 aaPredicted RBP22.64■■□□□ 1.21
ERCC3-207ENST00000490062 EIF5P55010 431 aaKnown RBP22.64■■□□□ 1.21
ERCC3-207ENST00000490062 COL23A1Q86Y22 540 aaPredicted RBP22.64■■□□□ 1.21
ERCC3-207ENST00000490062 MYH16Q9H6N6 1097 aa22.64■■□□□ 1.21
ERCC3-207ENST00000490062 SPINK5Q9NQ38 1064 aaPredicted RBP22.64■■□□□ 1.21
ERCC3-207ENST00000490062 E9PSI1 815 aa22.63■■□□□ 1.21
ERCC3-207ENST00000490062 KRT24Q2M2I5 525 aa22.62■■□□□ 1.21
ERCC3-207ENST00000490062 TSR2Q969E8 191 aaKnown RBP22.62■■□□□ 1.21
ERCC3-207ENST00000490062 CHMP4AQ9BY43 222 aa22.62■■□□□ 1.21
ERCC3-207ENST00000490062 C4AP0C0L4 1744 aa22.62■■□□□ 1.21
ERCC3-207ENST00000490062 A1BGP04217 495 aa22.61■■□□□ 1.21
ERCC3-207ENST00000490062 SLFN5Q08AF3 891 aa22.61■■□□□ 1.21
ERCC3-207ENST00000490062 TRAPPC3LQ5T215 181 aa22.61■■□□□ 1.21
ERCC3-207ENST00000490062 DUSP27Q5VZP5 1158 aa22.61■■□□□ 1.21
ERCC3-207ENST00000490062 TRMT2AQ8IZ69 625 aaKnown RBP22.61■■□□□ 1.21
ERCC3-207ENST00000490062 NBPF26B4DH59 902 aa22.6■■□□□ 1.21
ERCC3-207ENST00000490062 NBPF10Q6P3W6 841 aaKnown RBP22.6■■□□□ 1.21
ERCC3-207ENST00000490062 NBPF15Q8N660 670 aa22.6■■□□□ 1.21
ERCC3-207ENST00000490062 ARHGEF1Q92888 912 aaKnown RBP22.6■■□□□ 1.21
ERCC3-207ENST00000490062 PDGFDQ9GZP0 370 aaPredicted RBP22.6■■□□□ 1.21
ERCC3-207ENST00000490062 COL15A1P39059 1388 aa22.6■■□□□ 1.21
ERCC3-207ENST00000490062 RGL2O15211 777 aa22.59■■□□□ 1.21
ERCC3-207ENST00000490062 HNRNPUQ00839 825 aaKnown RBP eCLIP22.59■■□□□ 1.21
ERCC3-207ENST00000490062 C8orf58Q8NAV2 365 aa22.59■■□□□ 1.21
ERCC3-207ENST00000490062 MTFR1LQ9H019 292 aa22.59■■□□□ 1.21
ERCC3-207ENST00000490062 ZBED9Q6R2W3 1325 aa22.58■■□□□ 1.21
ERCC3-207ENST00000490062 A0A087WZG4 1122 aa22.58■■□□□ 1.21
ERCC3-207ENST00000490062 LRP10Q7Z4F1 713 aa22.58■■□□□ 1.21
ERCC3-207ENST00000490062 CANXP27824 592 aaKnown RBP22.57■■□□□ 1.2
ERCC3-207ENST00000490062 PDIA6Q15084 440 aa22.57■■□□□ 1.2
ERCC3-207ENST00000490062 USP42Q9H9J4 1324 aaKnown RBP22.57■■□□□ 1.2
ERCC3-207ENST00000490062 PHF14O94880 888 aa22.56■■□□□ 1.2
ERCC3-207ENST00000490062 TSPYL6Q8N831 410 aa22.56■■□□□ 1.2
ERCC3-207ENST00000490062 RFC4P35249 363 aa22.55■■□□□ 1.2
ERCC3-207ENST00000490062 HDGFL1Q5TGJ6 251 aa22.55■■□□□ 1.2
ERCC3-207ENST00000490062 SMIM5Q71RC9 77 aa22.55■■□□□ 1.2
ERCC3-207ENST00000490062 DDX21Q9NR30 783 aaKnown RBP eCLIP22.55■■□□□ 1.2
ERCC3-207ENST00000490062 NARFQ9UHQ1 456 aa22.55■■□□□ 1.2
ERCC3-207ENST00000490062 LRP5O75197 1615 aa22.55■■□□□ 1.2
ERCC3-207ENST00000490062 TWISTNBQ3B726 338 aaPredicted RBP22.54■■□□□ 1.2
ERCC3-207ENST00000490062 SGIP1Q9BQI5 828 aa22.54■■□□□ 1.2
ERCC3-207ENST00000490062 SCN7AQ01118 1682 aa22.53■■□□□ 1.2
ERCC3-207ENST00000490062 EIF2S2P20042 333 aaKnown RBP22.53■■□□□ 1.2
ERCC3-207ENST00000490062 EXOSC9Q06265 439 aaKnown RBP22.53■■□□□ 1.2
ERCC3-207ENST00000490062 CDCA7LQ96GN5 454 aa22.53■■□□□ 1.2
ERCC3-207ENST00000490062 DBF4Q9UBU7 674 aaPredicted RBP22.53■■□□□ 1.2
ERCC3-207ENST00000490062 VAMP4O75379 141 aa22.52■■□□□ 1.2
ERCC3-207ENST00000490062 GYS1P13807 737 aa22.52■■□□□ 1.2
ERCC3-207ENST00000490062 SPON1Q9HCB6 807 aa22.52■■□□□ 1.2
ERCC3-207ENST00000490062 BCORQ6W2J9 1755 aa22.52■■□□□ 1.2
ERCC3-207ENST00000490062 CACNA1FO60840 1977 aa22.52■■□□□ 1.2
ERCC3-207ENST00000490062 CCDC30Q5VVM6 783 aa22.51■■□□□ 1.19
ERCC3-207ENST00000490062 NLGN1Q8N2Q7 840 aa22.51■■□□□ 1.19
ERCC3-207ENST00000490062 ELL2O00472 640 aaPredicted RBP22.5■■□□□ 1.19
ERCC3-207ENST00000490062 CT47B1P0C2W7 299 aaPredicted RBP22.5■■□□□ 1.19
ERCC3-207ENST00000490062 PIP4K2AP48426 406 aaPredicted RBP22.5■■□□□ 1.19
ERCC3-207ENST00000490062 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
ERCC3-207ENST00000490062 ZNF428Q96B54 188 aa22.5■■□□□ 1.19
ERCC3-207ENST00000490062 ZPR1O75312 459 aa22.49■■□□□ 1.19
ERCC3-207ENST00000490062 CAMTA2O94983 1202 aa22.49■■□□□ 1.19
ERCC3-207ENST00000490062 ZBTB7AO95365 584 aa22.49■■□□□ 1.19
ERCC3-207ENST00000490062 PTGER2P43116 358 aa22.49■■□□□ 1.19
ERCC3-207ENST00000490062 PROSER3Q2NL68 480 aa22.49■■□□□ 1.19
ERCC3-207ENST00000490062 CLEC4GQ6UXB4 293 aa22.49■■□□□ 1.19
ERCC3-207ENST00000490062 DZIP3Q86Y13 1208 aaKnown RBP22.49■■□□□ 1.19
ERCC3-207ENST00000490062 BCL2L12Q9HB09 334 aa22.49■■□□□ 1.19
ERCC3-207ENST00000490062 HYPKQ9NX55 129 aa22.49■■□□□ 1.19
ERCC3-207ENST00000490062 CHPF2Q9P2E5 772 aa22.49■■□□□ 1.19
ERCC3-207ENST00000490062 ERVV-1B6SEH8 477 aa22.48■■□□□ 1.19
ERCC3-207ENST00000490062 MSH5O43196 834 aa22.48■■□□□ 1.19
ERCC3-207ENST00000490062 SRP68Q9UHB9 627 aaKnown RBP22.48■■□□□ 1.19
ERCC3-207ENST00000490062 USPL1Q5W0Q7 1092 aa22.47■■□□□ 1.19
ERCC3-207ENST00000490062 MYL6BP14649 208 aa22.46■■□□□ 1.19
ERCC3-207ENST00000490062 TBC1D2BQ9UPU7 963 aa22.46■■□□□ 1.19
ERCC3-207ENST00000490062 MAP3K15Q6ZN16 1313 aa22.46■■□□□ 1.19
ERCC3-207ENST00000490062 TM4SF1P30408 202 aa22.45■■□□□ 1.18
ERCC3-207ENST00000490062 FKBP8Q14318 412 aa22.45■■□□□ 1.18
ERCC3-207ENST00000490062 NECTIN2Q92692 538 aa22.45■■□□□ 1.18
ERCC3-207ENST00000490062 ATF5Q9Y2D1 282 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms