RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 UBAP1LF5GYI3 381 aa12.21□□□□□ -0.45
NOD1-208ENST00000489614 TATP17735 454 aaPredicted RBP12.21□□□□□ -0.45
NOD1-208ENST00000489614 TUBGCP6Q96RT7 1819 aa12.21□□□□□ -0.45
NOD1-208ENST00000489614 HOXB7P09629 217 aa12.21□□□□□ -0.46
NOD1-208ENST00000489614 RLBP1P12271 317 aa12.21□□□□□ -0.46
NOD1-208ENST00000489614 TWISTNBQ3B726 338 aaPredicted RBP12.21□□□□□ -0.46
NOD1-208ENST00000489614 FAM161AQ3B820 660 aa12.21□□□□□ -0.46
NOD1-208ENST00000489614 CRBNQ96SW2 442 aa12.21□□□□□ -0.46
NOD1-208ENST00000489614 GRPEL1Q9HAV7 217 aa12.21□□□□□ -0.46
NOD1-208ENST00000489614 SPATA31A5Q5VU36 1347 aa12.21□□□□□ -0.46
NOD1-208ENST00000489614 SPATA31A7Q8IWB4 1347 aa12.21□□□□□ -0.46
NOD1-208ENST00000489614 KDM2BQ8NHM5 1336 aa12.21□□□□□ -0.46
NOD1-208ENST00000489614 PCDH11XQ9BZA7 1347 aa12.21□□□□□ -0.46
NOD1-208ENST00000489614 PCDH11YQ9BZA8 1340 aa12.21□□□□□ -0.46
NOD1-208ENST00000489614 TAF1LQ8IZX4 1826 aa12.2□□□□□ -0.46
NOD1-208ENST00000489614 SPG7Q9UQ90 795 aa12.2□□□□□ -0.46
NOD1-208ENST00000489614 AFDNP55196 1824 aaKnown RBP12.2□□□□□ -0.46
NOD1-208ENST00000489614 EIF4A1P60842 406 aaKnown RBP12.2□□□□□ -0.46
NOD1-208ENST00000489614 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
NOD1-208ENST00000489614 NLRP2Q9NX02 1062 aa12.2□□□□□ -0.46
NOD1-208ENST00000489614 BTG4Q9NY30 223 aa12.2□□□□□ -0.46
NOD1-208ENST00000489614 TNNQ9UQP3 1299 aa12.2□□□□□ -0.46
NOD1-208ENST00000489614 THRAP3Q9Y2W1 955 aaKnown RBP12.2□□□□□ -0.46
NOD1-208ENST00000489614 ATRNO75882 1429 aa12.2□□□□□ -0.46
NOD1-208ENST00000489614 BCL9O00512 1426 aa12.19□□□□□ -0.46
NOD1-208ENST00000489614 CDK11BP21127 795 aaKnown RBP12.19□□□□□ -0.46
NOD1-208ENST00000489614 RTF1Q92541 710 aaKnown RBP12.19□□□□□ -0.46
NOD1-208ENST00000489614 BCORQ6W2J9 1755 aa12.19□□□□□ -0.46
NOD1-208ENST00000489614 ZBTB7CA1YPR0 619 aa12.19□□□□□ -0.46
NOD1-208ENST00000489614 IL2RBP14784 551 aa12.19□□□□□ -0.46
NOD1-208ENST00000489614 ZSCAN20P17040 1043 aaPredicted RBP12.19□□□□□ -0.46
NOD1-208ENST00000489614 KRT24Q2M2I5 525 aa12.19□□□□□ -0.46
NOD1-208ENST00000489614 C8orf34Q49A92 452 aa12.19□□□□□ -0.46
NOD1-208ENST00000489614 BTAF1O14981 1849 aa12.19□□□□□ -0.46
NOD1-208ENST00000489614 KIF16BQ96L93 1317 aa12.19□□□□□ -0.46
NOD1-208ENST00000489614 IFNL2Q8IZJ0 200 aa12.19□□□□□ -0.46
NOD1-208ENST00000489614 SECISBP2LQ93073 1101 aaKnown RBP12.19□□□□□ -0.46
NOD1-208ENST00000489614 SLC52A2Q9HAB3 445 aa12.19□□□□□ -0.46
NOD1-208ENST00000489614 CASZ1Q86V15 1759 aa12.18□□□□□ -0.46
NOD1-208ENST00000489614 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
NOD1-208ENST00000489614 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.18□□□□□ -0.46
NOD1-208ENST00000489614 RAPGEF4Q8WZA2 1011 aa12.18□□□□□ -0.46
NOD1-208ENST00000489614 DCAF5Q96JK2 942 aa12.18□□□□□ -0.46
NOD1-208ENST00000489614 TRIM27P14373 513 aa12.18□□□□□ -0.46
NOD1-208ENST00000489614 UQCRHLA0A096LP55 91 aa12.17□□□□□ -0.46
NOD1-208ENST00000489614 UQCRHP07919 91 aa12.17□□□□□ -0.46
NOD1-208ENST00000489614 TSPYL4Q9UJ04 414 aa12.17□□□□□ -0.46
NOD1-208ENST00000489614 DNTTIP2Q5QJE6 756 aaKnown RBP12.17□□□□□ -0.46
NOD1-208ENST00000489614 ATF7IPQ6VMQ6 1270 aa12.17□□□□□ -0.46
NOD1-208ENST00000489614 MPRIPQ6WCQ1 1025 aa12.17□□□□□ -0.46
NOD1-208ENST00000489614 NOB1Q9ULX3 412 aaKnown RBP12.17□□□□□ -0.46
NOD1-208ENST00000489614 TRAK2O60296 914 aa12.16□□□□□ -0.46
NOD1-208ENST00000489614 IGSF3O75054 1194 aa12.16□□□□□ -0.46
NOD1-208ENST00000489614 UTP14CQ5TAP6 766 aaKnown RBP12.16□□□□□ -0.46
NOD1-208ENST00000489614 TOM1L2Q6ZVM7 507 aa12.16□□□□□ -0.46
NOD1-208ENST00000489614 CERS3Q8IU89 383 aa12.16□□□□□ -0.46
NOD1-208ENST00000489614 MIS18AQ9NYP9 233 aa12.16□□□□□ -0.46
NOD1-208ENST00000489614 OFD1O75665 1012 aa12.16□□□□□ -0.46
NOD1-208ENST00000489614 PIP4K2BP78356 416 aa12.16□□□□□ -0.46
NOD1-208ENST00000489614 CBX1P83916 185 aa12.16□□□□□ -0.46
NOD1-208ENST00000489614 C1orf141Q5JVX7 400 aa12.16□□□□□ -0.46
NOD1-208ENST00000489614 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
NOD1-208ENST00000489614 ZCRB1Q8TBF4 217 aaKnown RBP12.16□□□□□ -0.46
NOD1-208ENST00000489614 ERVV-2B6SEH9 535 aa12.15□□□□□ -0.46
NOD1-208ENST00000489614 KCNQ3O43525 872 aa12.15□□□□□ -0.46
NOD1-208ENST00000489614 HSP90AB1P08238 724 aaKnown RBP12.15□□□□□ -0.46
NOD1-208ENST00000489614 LRP10Q7Z4F1 713 aa12.15□□□□□ -0.46
NOD1-208ENST00000489614 PTPRCP08575 1304 aa12.15□□□□□ -0.46
NOD1-208ENST00000489614 SMC4Q9NTJ3 1288 aa12.15□□□□□ -0.46
NOD1-208ENST00000489614 ATP10DQ9P241 1426 aa12.15□□□□□ -0.47
NOD1-208ENST00000489614 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.47
NOD1-208ENST00000489614 RGPD4Q7Z3J3 1758 aa12.15□□□□□ -0.47
NOD1-208ENST00000489614 MVPQ14764 893 aaKnown RBP12.14□□□□□ -0.47
NOD1-208ENST00000489614 VPS72Q15906 364 aa12.14□□□□□ -0.47
NOD1-208ENST00000489614 CSB-PGBD3P0DP91 1061 aa12.14□□□□□ -0.47
NOD1-208ENST00000489614 MSNP26038 577 aaKnown RBP12.14□□□□□ -0.47
NOD1-208ENST00000489614 CGNQ9P2M7 1197 aaKnown RBP12.14□□□□□ -0.47
NOD1-208ENST00000489614 CDCA7Q9BWT1 371 aaPredicted RBP12.14□□□□□ -0.47
NOD1-208ENST00000489614 LAMB2P55268 1798 aa12.13□□□□□ -0.47
NOD1-208ENST00000489614 MCM4P33991 863 aa12.13□□□□□ -0.47
NOD1-208ENST00000489614 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
NOD1-208ENST00000489614 BECN1Q14457 450 aa12.13□□□□□ -0.47
NOD1-208ENST00000489614 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.13□□□□□ -0.47
NOD1-208ENST00000489614 PANK1Q8TE04 598 aa12.13□□□□□ -0.47
NOD1-208ENST00000489614 BCL2L13Q9BXK5 485 aa12.13□□□□□ -0.47
NOD1-208ENST00000489614 GIGYF1O75420 1035 aaPredicted RBP12.13□□□□□ -0.47
NOD1-208ENST00000489614 HSPA1LP34931 641 aa12.13□□□□□ -0.47
NOD1-208ENST00000489614 UNC5CLQ8IV45 518 aa12.13□□□□□ -0.47
NOD1-208ENST00000489614 INTS3Q68E01 1043 aaKnown RBP12.12□□□□□ -0.47
NOD1-208ENST00000489614 NUP98P52948 1817 aa12.12□□□□□ -0.47
NOD1-208ENST00000489614 BTBD11A6QL63 1104 aa12.12□□□□□ -0.47
NOD1-208ENST00000489614 PDIA6Q15084 440 aa12.12□□□□□ -0.47
NOD1-208ENST00000489614 DZIP1LQ8IYY4 767 aaKnown RBP12.12□□□□□ -0.47
NOD1-208ENST00000489614 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
NOD1-208ENST00000489614 STRN4Q9NRL3 753 aa12.12□□□□□ -0.47
NOD1-208ENST00000489614 BRD2P25440 801 aaKnown RBP12.11□□□□□ -0.47
NOD1-208ENST00000489614 ZNF790Q6PG37 636 aa12.11□□□□□ -0.47
NOD1-208ENST00000489614 SCN7AQ01118 1682 aa12.11□□□□□ -0.47
NOD1-208ENST00000489614 ZBTB40Q9NUA8 1239 aa12.11□□□□□ -0.47
NOD1-208ENST00000489614 TNS1Q9HBL0 1735 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms