RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
SMIM11A-206ENST00000489469 ANO8Q9HCE9 1232 aaPredicted RBP20.18■□□□□ 0.82
SMIM11A-206ENST00000489469 LAS1LQ9Y4W2 734 aaKnown RBP20.18■□□□□ 0.82
SMIM11A-206ENST00000489469 CNTNAP4Q9C0A0 1308 aa20.18■□□□□ 0.82
SMIM11A-206ENST00000489469 SNRPA1P09661 255 aaKnown RBP20.17■□□□□ 0.82
SMIM11A-206ENST00000489469 ZNF853P0CG23 659 aa20.17■□□□□ 0.82
SMIM11A-206ENST00000489469 RC3H1Q5TC82 1133 aaKnown RBP20.17■□□□□ 0.82
SMIM11A-206ENST00000489469 AK7Q96M32 723 aa20.17■□□□□ 0.82
SMIM11A-206ENST00000489469 ZNF219Q9P2Y4 722 aaPredicted RBP20.17■□□□□ 0.82
SMIM11A-206ENST00000489469 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
SMIM11A-206ENST00000489469 STARD3NLO95772 234 aa20.16■□□□□ 0.82
SMIM11A-206ENST00000489469 ATXN8OSP0DMR3 200 aa20.16■□□□□ 0.82
SMIM11A-206ENST00000489469 EIF4A1P60842 406 aaKnown RBP20.16■□□□□ 0.82
SMIM11A-206ENST00000489469 DNAJC10Q8IXB1 793 aa20.16■□□□□ 0.82
SMIM11A-206ENST00000489469 SENP3-EIF4A1A0A087X0R7 540 aa20.15■□□□□ 0.82
SMIM11A-206ENST00000489469 ZNF827Q17R98 1081 aa20.15■□□□□ 0.82
SMIM11A-206ENST00000489469 FLAD1Q8NFF5 587 aa20.15■□□□□ 0.82
SMIM11A-206ENST00000489469 TFCP2L1Q9NZI6 479 aa20.15■□□□□ 0.82
SMIM11A-206ENST00000489469 CYP19A1P11511 503 aaPredicted RBP20.13■□□□□ 0.81
SMIM11A-206ENST00000489469 R3HDM1Q15032 1099 aaKnown RBP20.13■□□□□ 0.81
SMIM11A-206ENST00000489469 MBIPQ9NS73 344 aa20.13■□□□□ 0.81
SMIM11A-206ENST00000489469 ZNF521Q96K83 1311 aa20.12■□□□□ 0.81
SMIM11A-206ENST00000489469 GIGYF1O75420 1035 aaPredicted RBP20.12■□□□□ 0.81
SMIM11A-206ENST00000489469 CRKLP46109 303 aaKnown RBP20.12■□□□□ 0.81
SMIM11A-206ENST00000489469 CCDC87Q9NVE4 849 aa20.12■□□□□ 0.81
SMIM11A-206ENST00000489469 CASZ1Q86V15 1759 aa20.11■□□□□ 0.81
SMIM11A-206ENST00000489469 GNPATO15228 680 aa20.11■□□□□ 0.81
SMIM11A-206ENST00000489469 SSFA2P28290 1259 aa20.11■□□□□ 0.81
SMIM11A-206ENST00000489469 RTCBQ9Y3I0 505 aaKnown RBP20.11■□□□□ 0.81
SMIM11A-206ENST00000489469 PSDA5PKW4 1024 aaPredicted RBP20.1■□□□□ 0.81
SMIM11A-206ENST00000489469 RPS6KA4O75676 772 aa20.1■□□□□ 0.81
SMIM11A-206ENST00000489469 HOXB7P09629 217 aa20.1■□□□□ 0.81
SMIM11A-206ENST00000489469 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
SMIM11A-206ENST00000489469 SOS1Q07889 1333 aaPredicted RBP20.09■□□□□ 0.81
SMIM11A-206ENST00000489469 CHMP4AQ9BY43 222 aa20.09■□□□□ 0.81
SMIM11A-206ENST00000489469 USP16Q9Y5T5 823 aa20.09■□□□□ 0.81
SMIM11A-206ENST00000489469 PNPLA7Q6ZV29 1317 aa20.08■□□□□ 0.81
SMIM11A-206ENST00000489469 GOLGA2Q08379 1002 aa20.08■□□□□ 0.81
SMIM11A-206ENST00000489469 INTS5Q6P9B9 1019 aaKnown RBP20.08■□□□□ 0.81
SMIM11A-206ENST00000489469 ERBB4Q15303 1308 aa20.07■□□□□ 0.8
SMIM11A-206ENST00000489469 HNRNPUQ00839 825 aaKnown RBP eCLIP20.07■□□□□ 0.8
SMIM11A-206ENST00000489469 SLC16A10Q8TF71 515 aa20.07■□□□□ 0.8
SMIM11A-206ENST00000489469 C4AP0C0L4 1744 aa20.07■□□□□ 0.8
SMIM11A-206ENST00000489469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.06■□□□□ 0.8
SMIM11A-206ENST00000489469 PRAMEF22A3QJZ6 481 aa20.06■□□□□ 0.8
SMIM11A-206ENST00000489469 TRAPPC3LQ5T215 181 aa20.06■□□□□ 0.8
SMIM11A-206ENST00000489469 NPM2Q86SE8 214 aaKnown RBP20.06■□□□□ 0.8
SMIM11A-206ENST00000489469 ZBTB1Q9Y2K1 713 aa20.06■□□□□ 0.8
SMIM11A-206ENST00000489469 CACNA1FO60840 1977 aa20.06■□□□□ 0.8
SMIM11A-206ENST00000489469 FANCIQ9NVI1 1328 aa20.05■□□□□ 0.8
SMIM11A-206ENST00000489469 E9PSI1 815 aa20.05■□□□□ 0.8
SMIM11A-206ENST00000489469 IL6STP40189 918 aaPredicted RBP20.05■□□□□ 0.8
SMIM11A-206ENST00000489469 TSR2Q969E8 191 aaKnown RBP20.05■□□□□ 0.8
SMIM11A-206ENST00000489469 A0A087WZG4 1122 aa20.04■□□□□ 0.8
SMIM11A-206ENST00000489469 PHF14O94880 888 aa20.04■□□□□ 0.8
SMIM11A-206ENST00000489469 CANXP27824 592 aaKnown RBP20.04■□□□□ 0.8
SMIM11A-206ENST00000489469 DUSP27Q5VZP5 1158 aa20.04■□□□□ 0.8
SMIM11A-206ENST00000489469 COL23A1Q86Y22 540 aaPredicted RBP20.04■□□□□ 0.8
SMIM11A-206ENST00000489469 A1BGP04217 495 aa20.03■□□□□ 0.8
SMIM11A-206ENST00000489469 COL15A1P39059 1388 aa20.03■□□□□ 0.8
SMIM11A-206ENST00000489469 RFC4P35249 363 aa20.02■□□□□ 0.8
SMIM11A-206ENST00000489469 EIF5P55010 431 aaKnown RBP20.02■□□□□ 0.8
SMIM11A-206ENST00000489469 KRT24Q2M2I5 525 aa20.02■□□□□ 0.8
SMIM11A-206ENST00000489469 ATF5Q9Y2D1 282 aaPredicted RBP20.02■□□□□ 0.8
SMIM11A-206ENST00000489469 COL24A1Q17RW2 1714 aa20.02■□□□□ 0.79
SMIM11A-206ENST00000489469 EIF2S2P20042 333 aaKnown RBP20.01■□□□□ 0.79
SMIM11A-206ENST00000489469 HDGFL1Q5TGJ6 251 aa20.01■□□□□ 0.79
SMIM11A-206ENST00000489469 AMIGO3Q86WK7 504 aa20.01■□□□□ 0.79
SMIM11A-206ENST00000489469 ARHGEF1Q92888 912 aaKnown RBP20.01■□□□□ 0.79
SMIM11A-206ENST00000489469 ZBED9Q6R2W3 1325 aa20.01■□□□□ 0.79
SMIM11A-206ENST00000489469 SLFN5Q08AF3 891 aa20■□□□□ 0.79
SMIM11A-206ENST00000489469 MTFR1LQ9H019 292 aa20■□□□□ 0.79
SMIM11A-206ENST00000489469 TWISTNBQ3B726 338 aaPredicted RBP19.99■□□□□ 0.79
SMIM11A-206ENST00000489469 C8orf58Q8NAV2 365 aa19.99■□□□□ 0.79
SMIM11A-206ENST00000489469 NBPF26B4DH59 902 aa19.98■□□□□ 0.79
SMIM11A-206ENST00000489469 ZPR1O75312 459 aa19.98■□□□□ 0.79
SMIM11A-206ENST00000489469 NBPF10Q6P3W6 841 aaKnown RBP19.98■□□□□ 0.79
SMIM11A-206ENST00000489469 NBPF15Q8N660 670 aa19.98■□□□□ 0.79
SMIM11A-206ENST00000489469 PDGFDQ9GZP0 370 aaPredicted RBP19.98■□□□□ 0.79
SMIM11A-206ENST00000489469 NARFQ9UHQ1 456 aa19.98■□□□□ 0.79
SMIM11A-206ENST00000489469 ZNF330Q9Y3S2 320 aaPredicted RBP19.98■□□□□ 0.79
SMIM11A-206ENST00000489469 USP42Q9H9J4 1324 aaKnown RBP19.98■□□□□ 0.79
SMIM11A-206ENST00000489469 BCORQ6W2J9 1755 aa19.98■□□□□ 0.79
SMIM11A-206ENST00000489469 SCN7AQ01118 1682 aa19.97■□□□□ 0.79
SMIM11A-206ENST00000489469 ELL2O00472 640 aaPredicted RBP19.97■□□□□ 0.79
SMIM11A-206ENST00000489469 EXOSC9Q06265 439 aaKnown RBP19.97■□□□□ 0.79
SMIM11A-206ENST00000489469 CCDC30Q5VVM6 783 aa19.97■□□□□ 0.79
SMIM11A-206ENST00000489469 SPON1Q9HCB6 807 aa19.97■□□□□ 0.79
SMIM11A-206ENST00000489469 DDX21Q9NR30 783 aaKnown RBP eCLIP19.97■□□□□ 0.79
SMIM11A-206ENST00000489469 DBF4Q9UBU7 674 aaPredicted RBP19.97■□□□□ 0.79
SMIM11A-206ENST00000489469 LRP5O75197 1615 aa19.96■□□□□ 0.79
SMIM11A-206ENST00000489469 SMIM5Q71RC9 77 aa19.96■□□□□ 0.79
SMIM11A-206ENST00000489469 TSPYL6Q8N831 410 aa19.96■□□□□ 0.79
SMIM11A-206ENST00000489469 RGL2O15211 777 aa19.95■□□□□ 0.78
SMIM11A-206ENST00000489469 ZBTB7AO95365 584 aa19.95■□□□□ 0.78
SMIM11A-206ENST00000489469 PIP4K2AP48426 406 aaPredicted RBP19.95■□□□□ 0.78
SMIM11A-206ENST00000489469 TRMT2AQ8IZ69 625 aaKnown RBP19.95■□□□□ 0.78
SMIM11A-206ENST00000489469 NLGN1Q8N2Q7 840 aa19.95■□□□□ 0.78
SMIM11A-206ENST00000489469 CDCA7LQ96GN5 454 aa19.95■□□□□ 0.78
SMIM11A-206ENST00000489469 MYL6BP14649 208 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms