RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 NGEFQ8N5V2 710 aa19.78■□□□□ 0.76
FDPS-213ENST00000489003 IFT57Q9NWB7 429 aa19.78■□□□□ 0.76
FDPS-213ENST00000489003 UBR3Q6ZT12 1888 aa19.77■□□□□ 0.76
FDPS-213ENST00000489003 QSER1Q2KHR3 1735 aa19.77■□□□□ 0.76
FDPS-213ENST00000489003 WDR63Q8IWG1 891 aa19.77■□□□□ 0.76
FDPS-213ENST00000489003 FLAD1Q8NFF5 587 aa19.77■□□□□ 0.76
FDPS-213ENST00000489003 MBIPQ9NS73 344 aa19.77■□□□□ 0.76
FDPS-213ENST00000489003 CCDC87Q9NVE4 849 aa19.77■□□□□ 0.76
FDPS-213ENST00000489003 RTCBQ9Y3I0 505 aaKnown RBP19.77■□□□□ 0.76
FDPS-213ENST00000489003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.76■□□□□ 0.75
FDPS-213ENST00000489003 PHF14O94880 888 aa19.75■□□□□ 0.75
FDPS-213ENST00000489003 A1BGP04217 495 aa19.75■□□□□ 0.75
FDPS-213ENST00000489003 SSFA2P28290 1259 aa19.75■□□□□ 0.75
FDPS-213ENST00000489003 TRAPPC3LQ5T215 181 aa19.75■□□□□ 0.75
FDPS-213ENST00000489003 CASZ1Q86V15 1759 aa19.75■□□□□ 0.75
FDPS-213ENST00000489003 MSH5O43196 834 aa19.74■□□□□ 0.75
FDPS-213ENST00000489003 ARHGEF1Q92888 912 aaKnown RBP19.74■□□□□ 0.75
FDPS-213ENST00000489003 ZBTB1Q9Y2K1 713 aa19.74■□□□□ 0.75
FDPS-213ENST00000489003 IL16Q14005 1332 aa19.74■□□□□ 0.75
FDPS-213ENST00000489003 ZBTB7AO95365 584 aa19.73■□□□□ 0.75
FDPS-213ENST00000489003 CANXP27824 592 aaKnown RBP19.73■□□□□ 0.75
FDPS-213ENST00000489003 KRT24Q2M2I5 525 aa19.73■□□□□ 0.75
FDPS-213ENST00000489003 SLC16A10Q8TF71 515 aa19.73■□□□□ 0.75
FDPS-213ENST00000489003 ATF5Q9Y2D1 282 aaPredicted RBP19.72■□□□□ 0.75
FDPS-213ENST00000489003 SOS1Q07889 1333 aaPredicted RBP19.72■□□□□ 0.75
FDPS-213ENST00000489003 ZNF521Q96K83 1311 aa19.72■□□□□ 0.75
FDPS-213ENST00000489003 ADRA2BP18089 450 aa19.71■□□□□ 0.75
FDPS-213ENST00000489003 EIF5P55010 431 aaKnown RBP19.71■□□□□ 0.75
FDPS-213ENST00000489003 SPINK5Q9NQ38 1064 aaPredicted RBP19.71■□□□□ 0.75
FDPS-213ENST00000489003 NBPF26B4DH59 902 aa19.7■□□□□ 0.74
FDPS-213ENST00000489003 PIP4K2AP48426 406 aaPredicted RBP19.7■□□□□ 0.74
FDPS-213ENST00000489003 NBPF10Q6P3W6 841 aaKnown RBP19.7■□□□□ 0.74
FDPS-213ENST00000489003 NBPF15Q8N660 670 aa19.7■□□□□ 0.74
FDPS-213ENST00000489003 TSR2Q969E8 191 aaKnown RBP19.7■□□□□ 0.74
FDPS-213ENST00000489003 MTFR1LQ9H019 292 aa19.7■□□□□ 0.74
FDPS-213ENST00000489003 EIF2S2P20042 333 aaKnown RBP19.69■□□□□ 0.74
FDPS-213ENST00000489003 RFC4P35249 363 aa19.69■□□□□ 0.74
FDPS-213ENST00000489003 IL6STP40189 918 aaPredicted RBP19.69■□□□□ 0.74
FDPS-213ENST00000489003 C8orf58Q8NAV2 365 aa19.69■□□□□ 0.74
FDPS-213ENST00000489003 ELL2O00472 640 aaPredicted RBP19.68■□□□□ 0.74
FDPS-213ENST00000489003 DUSP27Q5VZP5 1158 aa19.68■□□□□ 0.74
FDPS-213ENST00000489003 SPON1Q9HCB6 807 aa19.68■□□□□ 0.74
FDPS-213ENST00000489003 NECTIN2Q92692 538 aa19.66■□□□□ 0.74
FDPS-213ENST00000489003 SRP68Q9UHB9 627 aaKnown RBP19.66■□□□□ 0.74
FDPS-213ENST00000489003 LAMB4A4D0S4 1761 aa19.65■□□□□ 0.74
FDPS-213ENST00000489003 A0A087WZG4 1122 aa19.65■□□□□ 0.74
FDPS-213ENST00000489003 HOXB7P09629 217 aa19.65■□□□□ 0.74
FDPS-213ENST00000489003 PTGER2P43116 358 aa19.65■□□□□ 0.74
FDPS-213ENST00000489003 GOLGA2Q08379 1002 aa19.65■□□□□ 0.74
FDPS-213ENST00000489003 PDIA6Q15084 440 aa19.65■□□□□ 0.74
FDPS-213ENST00000489003 TSPYL6Q8N831 410 aa19.65■□□□□ 0.74
FDPS-213ENST00000489003 SGIP1Q9BQI5 828 aa19.65■□□□□ 0.74
FDPS-213ENST00000489003 NARFQ9UHQ1 456 aa19.65■□□□□ 0.74
FDPS-213ENST00000489003 USPL1Q5W0Q7 1092 aa19.64■□□□□ 0.73
FDPS-213ENST00000489003 MSL1Q68DK7 614 aa19.64■□□□□ 0.73
FDPS-213ENST00000489003 TBC1D2BQ9UPU7 963 aa19.64■□□□□ 0.73
FDPS-213ENST00000489003 ZNF330Q9Y3S2 320 aaPredicted RBP19.64■□□□□ 0.73
FDPS-213ENST00000489003 FANCIQ9NVI1 1328 aa19.64■□□□□ 0.73
FDPS-213ENST00000489003 COL15A1P39059 1388 aa19.64■□□□□ 0.73
FDPS-213ENST00000489003 USP42Q9H9J4 1324 aaKnown RBP19.63■□□□□ 0.73
FDPS-213ENST00000489003 ZPR1O75312 459 aa19.63■□□□□ 0.73
FDPS-213ENST00000489003 GYS1P13807 737 aa19.63■□□□□ 0.73
FDPS-213ENST00000489003 SLFN5Q08AF3 891 aa19.63■□□□□ 0.73
FDPS-213ENST00000489003 CDCA7LQ96GN5 454 aa19.63■□□□□ 0.73
FDPS-213ENST00000489003 ERBB4Q15303 1308 aa19.62■□□□□ 0.73
FDPS-213ENST00000489003 MYL6BP14649 208 aa19.62■□□□□ 0.73
FDPS-213ENST00000489003 HNRNPUQ00839 825 aaKnown RBP eCLIP19.62■□□□□ 0.733e-6■■■□□ 17.5
FDPS-213ENST00000489003 EXOSC9Q06265 439 aaKnown RBP19.62■□□□□ 0.73
FDPS-213ENST00000489003 NPM2Q86SE8 214 aaKnown RBP19.62■□□□□ 0.73
FDPS-213ENST00000489003 NLGN1Q8N2Q7 840 aa19.62■□□□□ 0.73
FDPS-213ENST00000489003 MYH16Q9H6N6 1097 aa19.62■□□□□ 0.73
FDPS-213ENST00000489003 C4AP0C0L4 1744 aa19.62■□□□□ 0.73
FDPS-213ENST00000489003 COL24A1Q17RW2 1714 aa19.62■□□□□ 0.73
FDPS-213ENST00000489003 ANXA1P04083 346 aa19.61■□□□□ 0.73
FDPS-213ENST00000489003 FKBP8Q14318 412 aa19.61■□□□□ 0.73
FDPS-213ENST00000489003 PROSER3Q2NL68 480 aa19.61■□□□□ 0.73
FDPS-213ENST00000489003 HDGFL1Q5TGJ6 251 aa19.61■□□□□ 0.73
FDPS-213ENST00000489003 LRP10Q7Z4F1 713 aa19.61■□□□□ 0.73
FDPS-213ENST00000489003 ARXQ96QS3 562 aa19.61■□□□□ 0.73
FDPS-213ENST00000489003 BCL2L12Q9HB09 334 aa19.61■□□□□ 0.73
FDPS-213ENST00000489003 E9PSI1 815 aa19.6■□□□□ 0.73
FDPS-213ENST00000489003 TWISTNBQ3B726 338 aaPredicted RBP19.6■□□□□ 0.73
FDPS-213ENST00000489003 DZIP3Q86Y13 1208 aaKnown RBP19.6■□□□□ 0.73
FDPS-213ENST00000489003 DDX21Q9NR30 783 aaKnown RBP eCLIP19.6■□□□□ 0.73
FDPS-213ENST00000489003 VAMP4O75379 141 aa19.59■□□□□ 0.73
FDPS-213ENST00000489003 CAMTA2O94983 1202 aa19.59■□□□□ 0.73
FDPS-213ENST00000489003 TRMT2AQ8IZ69 625 aaKnown RBP19.59■□□□□ 0.73
FDPS-213ENST00000489003 POLD1P28340 1107 aa19.58■□□□□ 0.72
FDPS-213ENST00000489003 TM4SF1P30408 202 aa19.58■□□□□ 0.72
FDPS-213ENST00000489003 TTLL7Q6ZT98 887 aa19.58■□□□□ 0.72
FDPS-213ENST00000489003 CHPF2Q9P2E5 772 aa19.58■□□□□ 0.72
FDPS-213ENST00000489003 DBF4Q9UBU7 674 aaPredicted RBP19.57■□□□□ 0.72
FDPS-213ENST00000489003 LRP5O75197 1615 aa19.56■□□□□ 0.72
FDPS-213ENST00000489003 MMP10P09238 476 aa19.56■□□□□ 0.72
FDPS-213ENST00000489003 CCDC30Q5VVM6 783 aa19.56■□□□□ 0.72
FDPS-213ENST00000489003 COPS6Q7L5N1 327 aa19.56■□□□□ 0.72
FDPS-213ENST00000489003 CHMP4AQ9BY43 222 aa19.56■□□□□ 0.72
FDPS-213ENST00000489003 TCERG1O14776 1098 aaKnown RBP19.55■□□□□ 0.72
FDPS-213ENST00000489003 PPP1R1BQ9UD71 204 aaPredicted RBP19.55■□□□□ 0.72
FDPS-213ENST00000489003 AIMP1Q12904 312 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms