RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 PPP1R12BO60237 982 aaPredicted RBP7.69□□□□□ -1.18
SSR1-209ENST00000488834 DKK1O94907 266 aa7.69□□□□□ -1.18
SSR1-209ENST00000488834 SLC16A10Q8TF71 515 aa7.69□□□□□ -1.18
SSR1-209ENST00000488834 STK32AQ8WU08 396 aa7.69□□□□□ -1.18
SSR1-209ENST00000488834 SCG3Q8WXD2 468 aaKnown RBP7.69□□□□□ -1.18
SSR1-209ENST00000488834 ARXQ96QS3 562 aa7.69□□□□□ -1.18
SSR1-209ENST00000488834 DYRK1BQ9Y463 629 aa7.69□□□□□ -1.18
SSR1-209ENST00000488834 A0A1B0GTH6 734 aa7.68□□□□□ -1.18
SSR1-209ENST00000488834 SLC35F4A4IF30 521 aa7.68□□□□□ -1.18
SSR1-209ENST00000488834 VSIG8P0DPA2 414 aa7.68□□□□□ -1.18
SSR1-209ENST00000488834 TATP17735 454 aaPredicted RBP7.68□□□□□ -1.18
SSR1-209ENST00000488834 PSMA6P60900 246 aaKnown RBP7.68□□□□□ -1.18
SSR1-209ENST00000488834 PGBD3Q8N328 593 aa7.68□□□□□ -1.18
SSR1-209ENST00000488834 GPAMQ9HCL2 828 aa7.68□□□□□ -1.18
SSR1-209ENST00000488834 ZMIZ1Q9ULJ6 1067 aa7.68□□□□□ -1.18
SSR1-209ENST00000488834 IQSEC3Q9UPP2 1182 aaPredicted RBP7.68□□□□□ -1.18
SSR1-209ENST00000488834 PARP3Q9Y6F1 533 aa7.68□□□□□ -1.18
SSR1-209ENST00000488834 USP3Q9Y6I4 520 aa7.68□□□□□ -1.18
SSR1-209ENST00000488834 SERTM1A2A2V5 107 aa7.67□□□□□ -1.18
SSR1-209ENST00000488834 CDC14CA4D256 554 aa7.67□□□□□ -1.18
SSR1-209ENST00000488834 EPHA4P54764 986 aa7.67□□□□□ -1.18
SSR1-209ENST00000488834 FOXK2Q01167 660 aa7.67□□□□□ -1.18
SSR1-209ENST00000488834 SWI5Q1ZZU3 235 aa7.67□□□□□ -1.18
SSR1-209ENST00000488834 TMEM164Q5U3C3 297 aa7.67□□□□□ -1.18
SSR1-209ENST00000488834 VTI1AQ96AJ9 217 aa7.67□□□□□ -1.18
SSR1-209ENST00000488834 F11P03951 625 aa7.66□□□□□ -1.18
SSR1-209ENST00000488834 ITGA6P23229 1130 aa7.66□□□□□ -1.18
SSR1-209ENST00000488834 ARSJQ5FYB0 599 aaPredicted RBP7.66□□□□□ -1.18
SSR1-209ENST00000488834 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
SSR1-209ENST00000488834 L3MBTL2Q969R5 705 aa7.66□□□□□ -1.18
SSR1-209ENST00000488834 ATAD2Q6PL18 1390 aa7.66□□□□□ -1.18
SSR1-209ENST00000488834 H7C1W4 665 aa7.65□□□□□ -1.18
SSR1-209ENST00000488834 PRMT3O60678 531 aa7.65□□□□□ -1.18
SSR1-209ENST00000488834 NOS2P35228 1153 aa7.65□□□□□ -1.18
SSR1-209ENST00000488834 TEAD4Q15561 434 aa7.65□□□□□ -1.18
SSR1-209ENST00000488834 BICDL1Q6ZP65 573 aa7.65□□□□□ -1.18
SSR1-209ENST00000488834 NPAS3Q8IXF0 933 aa7.65□□□□□ -1.18
SSR1-209ENST00000488834 GAS2L2Q8NHY3 880 aa7.65□□□□□ -1.18
SSR1-209ENST00000488834 MSX1P28360 303 aa7.64□□□□□ -1.19
SSR1-209ENST00000488834 C1orf216Q8TAB5 229 aa7.64□□□□□ -1.19
SSR1-209ENST00000488834 PRIMPOLQ96LW4 560 aa7.64□□□□□ -1.19
SSR1-209ENST00000488834 NEUROD4Q9HD90 331 aa7.64□□□□□ -1.19
SSR1-209ENST00000488834 GJA3Q9Y6H8 435 aa7.64□□□□□ -1.19
SSR1-209ENST00000488834 THBS1P07996 1170 aa7.63□□□□□ -1.19
SSR1-209ENST00000488834 IGFBP4P22692 258 aa7.63□□□□□ -1.19
SSR1-209ENST00000488834 EFHC2Q5JST6 749 aa7.63□□□□□ -1.19
SSR1-209ENST00000488834 FOXR1Q6PIV2 292 aa7.63□□□□□ -1.19
SSR1-209ENST00000488834 ZDHHC1Q8WTX9 485 aa7.63□□□□□ -1.19
SSR1-209ENST00000488834 IRF7Q92985 503 aa7.63□□□□□ -1.19
SSR1-209ENST00000488834 NGLY1Q96IV0 654 aa7.63□□□□□ -1.19
SSR1-209ENST00000488834 RUBCNLQ9H714 662 aa7.63□□□□□ -1.19
SSR1-209ENST00000488834 HCN4Q9Y3Q4 1203 aa7.63□□□□□ -1.19
SSR1-209ENST00000488834 C21orf2O43822 256 aa7.62□□□□□ -1.19
SSR1-209ENST00000488834 SV2AQ7L0J3 742 aa7.62□□□□□ -1.19
SSR1-209ENST00000488834 VWA5B2Q8N398 1253 aa7.62□□□□□ -1.19
SSR1-209ENST00000488834 NUCKS1Q9H1E3 243 aaKnown RBP7.62□□□□□ -1.19
SSR1-209ENST00000488834 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.62□□□□□ -1.193e-6■■□□□ 12.5
SSR1-209ENST00000488834 ZDHHC3Q9NYG2 299 aa7.62□□□□□ -1.19
SSR1-209ENST00000488834 EML1O00423 815 aa7.61□□□□□ -1.19
SSR1-209ENST00000488834 WEE1P30291 646 aa7.61□□□□□ -1.19
SSR1-209ENST00000488834 TXLNAP40222 546 aa7.61□□□□□ -1.19
SSR1-209ENST00000488834 SH3PXD2AQ5TCZ1 1133 aa7.61□□□□□ -1.19
SSR1-209ENST00000488834 TRIM22Q8IYM9 498 aa7.61□□□□□ -1.19
SSR1-209ENST00000488834 RHPN1Q8TCX5 695 aa7.61□□□□□ -1.19
SSR1-209ENST00000488834 FOXO3O43524 673 aa7.6□□□□□ -1.19
SSR1-209ENST00000488834 PDE4CQ08493 712 aa7.6□□□□□ -1.19
SSR1-209ENST00000488834 ZNF295-AS1Q8N0V1 137 aa7.6□□□□□ -1.19
SSR1-209ENST00000488834 GMCL1Q96IK5 515 aa7.6□□□□□ -1.19
SSR1-209ENST00000488834 TRERF1Q96PN7 1200 aa7.6□□□□□ -1.19
SSR1-209ENST00000488834 C2orf49Q9BVC5 232 aaPredicted RBP7.6□□□□□ -1.19
SSR1-209ENST00000488834 PHACTR1Q9C0D0 580 aa7.6□□□□□ -1.19
SSR1-209ENST00000488834 ATP4AP20648 1035 aa7.59□□□□□ -1.19
SSR1-209ENST00000488834 ATP2B4P23634 1241 aa7.59□□□□□ -1.19
SSR1-209ENST00000488834 FAM69CQ0P6D2 419 aa7.59□□□□□ -1.19
SSR1-209ENST00000488834 GAS6Q14393 721 aa7.59□□□□□ -1.19
SSR1-209ENST00000488834 STAG2Q8N3U4 1231 aa7.59□□□□□ -1.19
SSR1-209ENST00000488834 CLP1Q92989 425 aaKnown RBP7.59□□□□□ -1.19
SSR1-209ENST00000488834 ZNF837Q96EG3 531 aaPredicted RBP7.59□□□□□ -1.19
SSR1-209ENST00000488834 MKNK1Q9BUB5 465 aa7.59□□□□□ -1.19
SSR1-209ENST00000488834 USTQ9Y2C2 406 aa7.59□□□□□ -1.19
SSR1-209ENST00000488834 A0A1W2PNR3 127 aa7.58□□□□□ -1.2
SSR1-209ENST00000488834 HIRAP54198 1017 aaPredicted RBP7.58□□□□□ -1.2
SSR1-209ENST00000488834 LBRQ14739 615 aaKnown RBP7.58□□□□□ -1.2
SSR1-209ENST00000488834 DBN1Q16643 649 aa7.58□□□□□ -1.2
SSR1-209ENST00000488834 FIGNL1Q6PIW4 674 aa7.58□□□□□ -1.2
SSR1-209ENST00000488834 ALDH16A1Q8IZ83 802 aa7.58□□□□□ -1.2
SSR1-209ENST00000488834 RETREG2Q8NC44 543 aa7.58□□□□□ -1.2
SSR1-209ENST00000488834 GTPBP3Q969Y2 492 aaKnown RBP7.58□□□□□ -1.2
SSR1-209ENST00000488834 COL25A1Q9BXS0 654 aaPredicted RBP7.58□□□□□ -1.2
SSR1-209ENST00000488834 CXXC1Q9P0U4 656 aaPredicted RBP7.58□□□□□ -1.2
SSR1-209ENST00000488834 CARNS1A5YM72 827 aa7.57□□□□□ -1.2
SSR1-209ENST00000488834 FKBP5Q13451 457 aaPredicted RBP7.57□□□□□ -1.2
SSR1-209ENST00000488834 C1orf53Q5VUE5 145 aa7.57□□□□□ -1.2
SSR1-209ENST00000488834 WHAMMQ8TF30 809 aa7.57□□□□□ -1.2
SSR1-209ENST00000488834 NANOS1Q8WY41 292 aaKnown RBP7.57□□□□□ -1.2
SSR1-209ENST00000488834 CNTNAP3BQ96NU0 1288 aa7.57□□□□□ -1.2
SSR1-209ENST00000488834 CNTNAP3Q9BZ76 1288 aa7.57□□□□□ -1.2
SSR1-209ENST00000488834 CRISPLD1Q9H336 500 aa7.57□□□□□ -1.2
SSR1-209ENST00000488834 PHF24Q9UPV7 400 aa7.57□□□□□ -1.2
SSR1-209ENST00000488834 TMEM88BA6NKF7 163 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms