RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 TAF7Q15545 349 aaPredicted RBP31.21■■■□□ 2.59
RHBDD3-205ENST00000488106 SYT17Q9BSW7 474 aa31.21■■■□□ 2.59
RHBDD3-205ENST00000488106 ZBTB1Q9Y2K1 713 aa31.21■■■□□ 2.59
RHBDD3-205ENST00000488106 NEUROD2Q15784 382 aa31.2■■■□□ 2.59
RHBDD3-205ENST00000488106 MIS18AQ9NYP9 233 aa31.2■■■□□ 2.59
RHBDD3-205ENST00000488106 STARD3NLO95772 234 aa31.19■■■□□ 2.58
RHBDD3-205ENST00000488106 SOS1Q07889 1333 aaPredicted RBP31.19■■■□□ 2.58
RHBDD3-205ENST00000488106 SCN7AQ01118 1682 aa31.19■■■□□ 2.58
RHBDD3-205ENST00000488106 COL15A1P39059 1388 aa31.18■■■□□ 2.58
RHBDD3-205ENST00000488106 KIF13BQ9NQT8 1826 aa31.18■■■□□ 2.58
RHBDD3-205ENST00000488106 GOLGB1Q14789 3259 aaKnown RBP31.17■■■□□ 2.58
RHBDD3-205ENST00000488106 BCORQ6W2J9 1755 aa31.16■■■□□ 2.58
RHBDD3-205ENST00000488106 CANXP27824 592 aaKnown RBP31.16■■■□□ 2.58
RHBDD3-205ENST00000488106 LMOD3Q0VAK6 560 aa31.16■■■□□ 2.58
RHBDD3-205ENST00000488106 TEX13AQ9BXU3 409 aaPredicted RBP31.16■■■□□ 2.58
RHBDD3-205ENST00000488106 SRP68Q9UHB9 627 aaKnown RBP31.16■■■□□ 2.58
RHBDD3-205ENST00000488106 AFDNP55196 1824 aaKnown RBP31.15■■■□□ 2.58
RHBDD3-205ENST00000488106 USP42Q9H9J4 1324 aaKnown RBP31.15■■■□□ 2.58
RHBDD3-205ENST00000488106 PRAMEF22A3QJZ6 481 aa31.14■■■□□ 2.58
RHBDD3-205ENST00000488106 GYS1P13807 737 aa31.14■■■□□ 2.58
RHBDD3-205ENST00000488106 PNISRQ8TF01 805 aaKnown RBP31.13■■■□□ 2.57
RHBDD3-205ENST00000488106 MMP10P09238 476 aa31.12■■■□□ 2.57
RHBDD3-205ENST00000488106 MRS2Q9HD23 443 aa31.12■■■□□ 2.57
RHBDD3-205ENST00000488106 N4BP2Q86UW6 1770 aaPredicted RBP31.12■■■□□ 2.57
RHBDD3-205ENST00000488106 SNRPA1P09661 255 aaKnown RBP31.11■■■□□ 2.57
RHBDD3-205ENST00000488106 NLGN1Q8N2Q7 840 aa31.11■■■□□ 2.57
RHBDD3-205ENST00000488106 ZNF330Q9Y3S2 320 aaPredicted RBP31.11■■■□□ 2.57
RHBDD3-205ENST00000488106 UTRNP46939 3433 aa31.1■■■□□ 2.57
RHBDD3-205ENST00000488106 NLGN2Q8NFZ4 835 aa31.1■■■□□ 2.57
RHBDD3-205ENST00000488106 CHD4Q14839 1912 aa31.09■■■□□ 2.57
RHBDD3-205ENST00000488106 ZPR1O75312 459 aa31.09■■■□□ 2.57
RHBDD3-205ENST00000488106 A1BGP04217 495 aa31.09■■■□□ 2.57
RHBDD3-205ENST00000488106 USP16Q9Y5T5 823 aa31.09■■■□□ 2.57
RHBDD3-205ENST00000488106 KIAA1551Q9HCM1 1747 aa31.09■■■□□ 2.57
RHBDD3-205ENST00000488106 USPL1Q5W0Q7 1092 aa31.08■■■□□ 2.57
RHBDD3-205ENST00000488106 DCAF8L1A6NGE4 600 aa31.07■■■□□ 2.56
RHBDD3-205ENST00000488106 PIP4K2AP48426 406 aaPredicted RBP31.07■■■□□ 2.56
RHBDD3-205ENST00000488106 FKBP8Q14318 412 aa31.07■■■□□ 2.56
RHBDD3-205ENST00000488106 TSPYL4Q9UJ04 414 aa31.07■■■□□ 2.56
RHBDD3-205ENST00000488106 TRIM35Q9UPQ4 493 aa31.07■■■□□ 2.56
RHBDD3-205ENST00000488106 EIF5P55010 431 aaKnown RBP31.06■■■□□ 2.56
RHBDD3-205ENST00000488106 APAF1O14727 1248 aa31.05■■■□□ 2.56
RHBDD3-205ENST00000488106 NARFQ9UHQ1 456 aa31.05■■■□□ 2.56
RHBDD3-205ENST00000488106 EIF4A1P60842 406 aaKnown RBP31.04■■■□□ 2.56
RHBDD3-205ENST00000488106 IL6STP40189 918 aaPredicted RBP31.03■■■□□ 2.56
RHBDD3-205ENST00000488106 CD2APQ9Y5K6 639 aa31.03■■■□□ 2.56
RHBDD3-205ENST00000488106 BRCA1P38398 1863 aaKnown RBP31.02■■■□□ 2.56
RHBDD3-205ENST00000488106 NRXN2Q9P2S2 1712 aa31.02■■■□□ 2.56
RHBDD3-205ENST00000488106 A0A087WZG4 1122 aa31.02■■■□□ 2.56
RHBDD3-205ENST00000488106 PARP3Q9Y6F1 533 aa31.02■■■□□ 2.56
RHBDD3-205ENST00000488106 NPM2Q86SE8 214 aaKnown RBP31.01■■■□□ 2.55
RHBDD3-205ENST00000488106 LAS1LQ9Y4W2 734 aaKnown RBP31.01■■■□□ 2.55
RHBDD3-205ENST00000488106 NUP98P52948 1817 aa31.01■■■□□ 2.55
RHBDD3-205ENST00000488106 PELP1Q8IZL8 1130 aaKnown RBP31■■■□□ 2.55
RHBDD3-205ENST00000488106 C10orf71Q711Q0 1435 aa30.99■■■□□ 2.55
RHBDD3-205ENST00000488106 GIGYF1O75420 1035 aaPredicted RBP30.99■■■□□ 2.55
RHBDD3-205ENST00000488106 DDR1Q08345 913 aa30.99■■■□□ 2.55
RHBDD3-205ENST00000488106 TBC1D2BQ9UPU7 963 aa30.99■■■□□ 2.55
RHBDD3-205ENST00000488106 SENP3-EIF4A1A0A087X0R7 540 aa30.98■■■□□ 2.55
RHBDD3-205ENST00000488106 BCL2L12Q9HB09 334 aa30.98■■■□□ 2.55
RHBDD3-205ENST00000488106 BABAM1Q9NWV8 329 aa30.97■■■□□ 2.55
RHBDD3-205ENST00000488106 NBPF26B4DH59 902 aa30.96■■■□□ 2.55
RHBDD3-205ENST00000488106 NBPF10Q6P3W6 841 aaKnown RBP30.96■■■□□ 2.55
RHBDD3-205ENST00000488106 NBPF15Q8N660 670 aa30.96■■■□□ 2.55
RHBDD3-205ENST00000488106 GPR162Q16538 588 aa30.94■■■□□ 2.54
RHBDD3-205ENST00000488106 DZIP3Q86Y13 1208 aaKnown RBP30.94■■■□□ 2.54
RHBDD3-205ENST00000488106 ANKRD31Q8N7Z5 1873 aa30.93■■■□□ 2.54
RHBDD3-205ENST00000488106 POLRMTO00411 1230 aaKnown RBP30.93■■■□□ 2.54
RHBDD3-205ENST00000488106 TM4SF1P30408 202 aa30.93■■■□□ 2.54
RHBDD3-205ENST00000488106 NFIXQ14938 502 aa30.93■■■□□ 2.54
RHBDD3-205ENST00000488106 PXDNLA1KZ92 1463 aa30.93■■■□□ 2.54
RHBDD3-205ENST00000488106 DLEC1Q9Y238 1755 aa30.92■■■□□ 2.54
RHBDD3-205ENST00000488106 CHL1O00533 1208 aa30.92■■■□□ 2.54
RHBDD3-205ENST00000488106 BICDL1Q6ZP65 573 aa30.92■■■□□ 2.54
RHBDD3-205ENST00000488106 WWC3Q9ULE0 1092 aa30.91■■■□□ 2.54
RHBDD3-205ENST00000488106 CAMTA2O94983 1202 aa30.9■■■□□ 2.54
RHBDD3-205ENST00000488106 CACNA1SQ13698 1873 aa30.89■■■□□ 2.54
RHBDD3-205ENST00000488106 KRT24Q2M2I5 525 aa30.89■■■□□ 2.54
RHBDD3-205ENST00000488106 TBC1D9BQ66K14 1250 aa30.88■■■□□ 2.53
RHBDD3-205ENST00000488106 CFAP44Q96MT7 982 aa30.88■■■□□ 2.53
RHBDD3-205ENST00000488106 ARFGEF1Q9Y6D6 1849 aa30.88■■■□□ 2.53
RHBDD3-205ENST00000488106 ANKRD36CQ5JPF3 1778 aa30.87■■■□□ 2.53
RHBDD3-205ENST00000488106 MYL6BP14649 208 aa30.87■■■□□ 2.53
RHBDD3-205ENST00000488106 EIF2S2P20042 333 aaKnown RBP30.87■■■□□ 2.53
RHBDD3-205ENST00000488106 FAM9BQ8IZU0 186 aa30.87■■■□□ 2.53
RHBDD3-205ENST00000488106 NGEFQ8N5V2 710 aa30.87■■■□□ 2.53
RHBDD3-205ENST00000488106 YBX3P16989 372 aaKnown RBP eCLIP30.86■■■□□ 2.53
RHBDD3-205ENST00000488106 CALD1Q05682 793 aaKnown RBP30.86■■■□□ 2.53
RHBDD3-205ENST00000488106 COL11A2P13942 1736 aaPredicted RBP30.85■■■□□ 2.53
RHBDD3-205ENST00000488106 MBIPQ9NS73 344 aa30.85■■■□□ 2.53
RHBDD3-205ENST00000488106 SERPINB2P05120 415 aa30.84■■■□□ 2.53
RHBDD3-205ENST00000488106 NECTIN2Q92692 538 aa30.84■■■□□ 2.53
RHBDD3-205ENST00000488106 IFT57Q9NWB7 429 aa30.84■■■□□ 2.53
RHBDD3-205ENST00000488106 CARMIL3Q8ND23 1372 aa30.83■■■□□ 2.53
RHBDD3-205ENST00000488106 ERBB4Q15303 1308 aa30.82■■■□□ 2.52
RHBDD3-205ENST00000488106 A0A0G2JLW4 131 aa30.82■■■□□ 2.52
RHBDD3-205ENST00000488106 GNAI1P63096 354 aa30.82■■■□□ 2.52
RHBDD3-205ENST00000488106 ZNF652Q9Y2D9 606 aa30.82■■■□□ 2.52
RHBDD3-205ENST00000488106 ZNF853P0CG23 659 aa30.81■■■□□ 2.52
RHBDD3-205ENST00000488106 TGFB2P61812 414 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms