RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
RPSA-208ENST00000487876 NEFMP07197 916 aa17.11■□□□□ 0.33
RPSA-208ENST00000487876 GYS1P13807 737 aa17.11■□□□□ 0.33
RPSA-208ENST00000487876 NFE2L2Q16236 605 aa17.11■□□□□ 0.33
RPSA-208ENST00000487876 THUMPD2Q9BTF0 503 aaKnown RBP17.11■□□□□ 0.33
RPSA-208ENST00000487876 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
RPSA-208ENST00000487876 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
RPSA-208ENST00000487876 MMP10P09238 476 aa17.1■□□□□ 0.33
RPSA-208ENST00000487876 FMNL2Q96PY5 1086 aa17.1■□□□□ 0.33
RPSA-208ENST00000487876 USP42Q9H9J4 1324 aaKnown RBP17.1■□□□□ 0.33
RPSA-208ENST00000487876 COL15A1P39059 1388 aa17.1■□□□□ 0.33
RPSA-208ENST00000487876 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
RPSA-208ENST00000487876 CCDC146Q8IYE0 955 aa17.09■□□□□ 0.33
RPSA-208ENST00000487876 N4BP2Q86UW6 1770 aaPredicted RBP17.09■□□□□ 0.33
RPSA-208ENST00000487876 CHD4Q14839 1912 aa17.08■□□□□ 0.33
RPSA-208ENST00000487876 SCN7AQ01118 1682 aa17.08■□□□□ 0.32
RPSA-208ENST00000487876 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.32
RPSA-208ENST00000487876 CANXP27824 592 aaKnown RBP17.08■□□□□ 0.32
RPSA-208ENST00000487876 PNNQ9H307 717 aaKnown RBP17.08■□□□□ 0.32
RPSA-208ENST00000487876 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
RPSA-208ENST00000487876 FKBP8Q14318 412 aa17.07■□□□□ 0.32
RPSA-208ENST00000487876 NLGN1Q8N2Q7 840 aa17.07■□□□□ 0.32
RPSA-208ENST00000487876 CD2APQ9Y5K6 639 aa17.07■□□□□ 0.32
RPSA-208ENST00000487876 AFDNP55196 1824 aaKnown RBP17.07■□□□□ 0.32
RPSA-208ENST00000487876 STARD3NLO95772 234 aa17.06■□□□□ 0.32
RPSA-208ENST00000487876 WDR43Q15061 677 aaKnown RBP eCLIP17.06■□□□□ 0.32
RPSA-208ENST00000487876 TAF7Q15545 349 aaPredicted RBP17.06■□□□□ 0.32
RPSA-208ENST00000487876 USPL1Q5W0Q7 1092 aa17.06■□□□□ 0.32
RPSA-208ENST00000487876 PELP1Q8IZL8 1130 aaKnown RBP17.06■□□□□ 0.32
RPSA-208ENST00000487876 BCORQ6W2J9 1755 aa17.06■□□□□ 0.32
RPSA-208ENST00000487876 C10orf71Q711Q0 1435 aa17.05■□□□□ 0.32
RPSA-208ENST00000487876 ADAMTS8Q9UP79 889 aa17.05■□□□□ 0.32
RPSA-208ENST00000487876 RRP7AQ9Y3A4 280 aaKnown RBP17.05■□□□□ 0.32
RPSA-208ENST00000487876 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
RPSA-208ENST00000487876 A1BGP04217 495 aa17.04■□□□□ 0.32
RPSA-208ENST00000487876 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
RPSA-208ENST00000487876 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
RPSA-208ENST00000487876 PIP4K2AP48426 406 aaPredicted RBP17.04■□□□□ 0.32
RPSA-208ENST00000487876 EIF5P55010 431 aaKnown RBP17.04■□□□□ 0.32
RPSA-208ENST00000487876 RIPK4P57078 832 aa17.04■□□□□ 0.32
RPSA-208ENST00000487876 DDR1Q08345 913 aa17.04■□□□□ 0.32
RPSA-208ENST00000487876 GPR162Q16538 588 aa17.04■□□□□ 0.32
RPSA-208ENST00000487876 ZPR1O75312 459 aa17.03■□□□□ 0.32
RPSA-208ENST00000487876 CCDC184Q52MB2 194 aa17.03■□□□□ 0.32
RPSA-208ENST00000487876 TEX13AQ9BXU3 409 aaPredicted RBP17.03■□□□□ 0.32
RPSA-208ENST00000487876 BCL2L12Q9HB09 334 aa17.03■□□□□ 0.32
RPSA-208ENST00000487876 NARFQ9UHQ1 456 aa17.03■□□□□ 0.32
RPSA-208ENST00000487876 WWC3Q9ULE0 1092 aa17.03■□□□□ 0.32
RPSA-208ENST00000487876 ZNF330Q9Y3S2 320 aaPredicted RBP17.03■□□□□ 0.32
RPSA-208ENST00000487876 PXDNLA1KZ92 1463 aa17.03■□□□□ 0.32
RPSA-208ENST00000487876 BRCA1P38398 1863 aaKnown RBP17.03■□□□□ 0.32
RPSA-208ENST00000487876 NRXN2Q9P2S2 1712 aa17.02■□□□□ 0.32
RPSA-208ENST00000487876 PARP3Q9Y6F1 533 aa17.02■□□□□ 0.32
RPSA-208ENST00000487876 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
RPSA-208ENST00000487876 YY1P25490 414 aa17.01■□□□□ 0.31
RPSA-208ENST00000487876 NEUROD2Q15784 382 aa17.01■□□□□ 0.31
RPSA-208ENST00000487876 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
RPSA-208ENST00000487876 POLRMTO00411 1230 aaKnown RBP17■□□□□ 0.31
RPSA-208ENST00000487876 TM4SF1P30408 202 aa16.99■□□□□ 0.31
RPSA-208ENST00000487876 IL6STP40189 918 aaPredicted RBP16.99■□□□□ 0.31
RPSA-208ENST00000487876 NFIXQ14938 502 aa16.99■□□□□ 0.31
RPSA-208ENST00000487876 PNISRQ8TF01 805 aaKnown RBP16.99■□□□□ 0.31
RPSA-208ENST00000487876 TBC1D2BQ9UPU7 963 aa16.99■□□□□ 0.31
RPSA-208ENST00000487876 EIF4A1P60842 406 aaKnown RBP16.98■□□□□ 0.31
RPSA-208ENST00000487876 TRIM35Q9UPQ4 493 aa16.98■□□□□ 0.31
RPSA-208ENST00000487876 A0A087WZG4 1122 aa16.97■□□□□ 0.31
RPSA-208ENST00000487876 NBPF26B4DH59 902 aa16.97■□□□□ 0.31
RPSA-208ENST00000487876 LMOD3Q0VAK6 560 aa16.97■□□□□ 0.31
RPSA-208ENST00000487876 NBPF10Q6P3W6 841 aaKnown RBP16.97■□□□□ 0.31
RPSA-208ENST00000487876 NBPF15Q8N660 670 aa16.97■□□□□ 0.31
RPSA-208ENST00000487876 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
RPSA-208ENST00000487876 ANKRD31Q8N7Z5 1873 aa16.97■□□□□ 0.31
RPSA-208ENST00000487876 A0A0G2JLW4 131 aa16.96■□□□□ 0.31
RPSA-208ENST00000487876 GIGYF1O75420 1035 aaPredicted RBP16.96■□□□□ 0.31
RPSA-208ENST00000487876 BICDL1Q6ZP65 573 aa16.96■□□□□ 0.31
RPSA-208ENST00000487876 DLEC1Q9Y238 1755 aa16.95■□□□□ 0.3
RPSA-208ENST00000487876 CAMTA2O94983 1202 aa16.95■□□□□ 0.3
RPSA-208ENST00000487876 TBC1D9BQ66K14 1250 aa16.95■□□□□ 0.3
RPSA-208ENST00000487876 ARFGEF1Q9Y6D6 1849 aa16.94■□□□□ 0.3
RPSA-208ENST00000487876 CARMIL3Q8ND23 1372 aa16.94■□□□□ 0.3
RPSA-208ENST00000487876 DPEP1P16444 411 aa16.94■□□□□ 0.3
RPSA-208ENST00000487876 TGFB2P61812 414 aa16.94■□□□□ 0.3
RPSA-208ENST00000487876 DZIP3Q86Y13 1208 aaKnown RBP16.94■□□□□ 0.3
RPSA-208ENST00000487876 COL11A2P13942 1736 aaPredicted RBP16.93■□□□□ 0.3
RPSA-208ENST00000487876 APAF1O14727 1248 aa16.93■□□□□ 0.3
RPSA-208ENST00000487876 ANP32CO43423 234 aa16.93■□□□□ 0.3
RPSA-208ENST00000487876 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
RPSA-208ENST00000487876 NUP98P52948 1817 aa16.93■□□□□ 0.3
RPSA-208ENST00000487876 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
RPSA-208ENST00000487876 GRIN3BO60391 1043 aa16.92■□□□□ 0.3
RPSA-208ENST00000487876 SERPINB2P05120 415 aa16.92■□□□□ 0.3
RPSA-208ENST00000487876 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
RPSA-208ENST00000487876 KCNA3P22001 575 aa16.91■□□□□ 0.3
RPSA-208ENST00000487876 CHRNA5P30532 468 aa16.91■□□□□ 0.3
RPSA-208ENST00000487876 KRT24Q2M2I5 525 aa16.91■□□□□ 0.3
RPSA-208ENST00000487876 CHL1O00533 1208 aa16.9■□□□□ 0.3
RPSA-208ENST00000487876 NGEFQ8N5V2 710 aa16.9■□□□□ 0.3
RPSA-208ENST00000487876 MRS2Q9HD23 443 aa16.9■□□□□ 0.3
RPSA-208ENST00000487876 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
RPSA-208ENST00000487876 CACNA1SQ13698 1873 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms