RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
LCN2-205ENST00000487719 CYP19A1P11511 503 aaPredicted RBP12.24□□□□□ -0.45
LCN2-205ENST00000487719 PTGER2P43116 358 aa12.24□□□□□ -0.45
LCN2-205ENST00000487719 NLGN1Q8N2Q7 840 aa12.24□□□□□ -0.45
LCN2-205ENST00000487719 BABAM1Q9NWV8 329 aa12.24□□□□□ -0.45
LCN2-205ENST00000487719 TSPYL4Q9UJ04 414 aa12.24□□□□□ -0.45
LCN2-205ENST00000487719 CHD4Q14839 1912 aa12.23□□□□□ -0.45
LCN2-205ENST00000487719 COL15A1P39059 1388 aa12.23□□□□□ -0.45
LCN2-205ENST00000487719 ARHGEF1Q92888 912 aaKnown RBP12.23□□□□□ -0.45
LCN2-205ENST00000487719 RRP7AQ9Y3A4 280 aaKnown RBP12.23□□□□□ -0.45
LCN2-205ENST00000487719 ZNF330Q9Y3S2 320 aaPredicted RBP12.23□□□□□ -0.45
LCN2-205ENST00000487719 CANXP27824 592 aaKnown RBP12.22□□□□□ -0.45
LCN2-205ENST00000487719 SGIP1Q9BQI5 828 aa12.22□□□□□ -0.45
LCN2-205ENST00000487719 FHDC1Q9C0D6 1143 aaPredicted RBP12.22□□□□□ -0.45
LCN2-205ENST00000487719 SCN7AQ01118 1682 aa12.22□□□□□ -0.45
LCN2-205ENST00000487719 BCORQ6W2J9 1755 aa12.21□□□□□ -0.45
LCN2-205ENST00000487719 SOS1Q07889 1333 aaPredicted RBP12.21□□□□□ -0.45
LCN2-205ENST00000487719 APAF1O14727 1248 aa12.21□□□□□ -0.45
LCN2-205ENST00000487719 INTS5Q6P9B9 1019 aaKnown RBP12.21□□□□□ -0.45
LCN2-205ENST00000487719 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.45
LCN2-205ENST00000487719 ZBTB1Q9Y2K1 713 aa12.21□□□□□ -0.45
LCN2-205ENST00000487719 LAS1LQ9Y4W2 734 aaKnown RBP12.21□□□□□ -0.45
LCN2-205ENST00000487719 CACNA1FO60840 1977 aa12.21□□□□□ -0.46
LCN2-205ENST00000487719 KIF13BQ9NQT8 1826 aa12.21□□□□□ -0.46
LCN2-205ENST00000487719 USP42Q9H9J4 1324 aaKnown RBP12.2□□□□□ -0.46
LCN2-205ENST00000487719 KCNQ3O43525 872 aa12.2□□□□□ -0.46
LCN2-205ENST00000487719 IL6STP40189 918 aaPredicted RBP12.2□□□□□ -0.46
LCN2-205ENST00000487719 MIS18AQ9NYP9 233 aa12.2□□□□□ -0.46
LCN2-205ENST00000487719 PARP3Q9Y6F1 533 aa12.2□□□□□ -0.46
LCN2-205ENST00000487719 AFDNP55196 1824 aaKnown RBP12.2□□□□□ -0.46
LCN2-205ENST00000487719 NUP98P52948 1817 aa12.19□□□□□ -0.46
LCN2-205ENST00000487719 MMP10P09238 476 aa12.19□□□□□ -0.46
LCN2-205ENST00000487719 AMIGO3Q86WK7 504 aa12.19□□□□□ -0.46
LCN2-205ENST00000487719 SYT17Q9BSW7 474 aa12.19□□□□□ -0.46
LCN2-205ENST00000487719 NARFQ9UHQ1 456 aa12.19□□□□□ -0.46
LCN2-205ENST00000487719 GYS1P13807 737 aa12.18□□□□□ -0.46
LCN2-205ENST00000487719 GNAI1P63096 354 aa12.18□□□□□ -0.46
LCN2-205ENST00000487719 SMIM5Q71RC9 77 aa12.18□□□□□ -0.46
LCN2-205ENST00000487719 FAM9BQ8IZU0 186 aa12.18□□□□□ -0.46
LCN2-205ENST00000487719 CHMP4AQ9BY43 222 aa12.18□□□□□ -0.46
LCN2-205ENST00000487719 ZNF652Q9Y2D9 606 aa12.18□□□□□ -0.46
LCN2-205ENST00000487719 CD2APQ9Y5K6 639 aa12.18□□□□□ -0.46
LCN2-205ENST00000487719 NPHP1O15259 732 aa12.17□□□□□ -0.46
LCN2-205ENST00000487719 A1BGP04217 495 aa12.17□□□□□ -0.46
LCN2-205ENST00000487719 EIF5P55010 431 aaKnown RBP12.17□□□□□ -0.46
LCN2-205ENST00000487719 EIF4A1P60842 406 aaKnown RBP12.17□□□□□ -0.46
LCN2-205ENST00000487719 CCDC184Q52MB2 194 aa12.17□□□□□ -0.46
LCN2-205ENST00000487719 USPL1Q5W0Q7 1092 aa12.17□□□□□ -0.46
LCN2-205ENST00000487719 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
LCN2-205ENST00000487719 ERBB4Q15303 1308 aa12.16□□□□□ -0.46
LCN2-205ENST00000487719 N4BP2Q86UW6 1770 aaPredicted RBP12.16□□□□□ -0.46
LCN2-205ENST00000487719 GIGYF1O75420 1035 aaPredicted RBP12.16□□□□□ -0.46
LCN2-205ENST00000487719 NGEFQ8N5V2 710 aa12.16□□□□□ -0.46
LCN2-205ENST00000487719 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
LCN2-205ENST00000487719 IFT57Q9NWB7 429 aa12.16□□□□□ -0.46
LCN2-205ENST00000487719 SRP68Q9UHB9 627 aaKnown RBP12.16□□□□□ -0.46
LCN2-205ENST00000487719 USP16Q9Y5T5 823 aa12.16□□□□□ -0.46
LCN2-205ENST00000487719 GPR162Q16538 588 aa12.15□□□□□ -0.46
LCN2-205ENST00000487719 KIF6Q6ZMV9 814 aa12.15□□□□□ -0.46
LCN2-205ENST00000487719 DZIP3Q86Y13 1208 aaKnown RBP12.15□□□□□ -0.46
LCN2-205ENST00000487719 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.46
LCN2-205ENST00000487719 CHL1O00533 1208 aa12.14□□□□□ -0.47
LCN2-205ENST00000487719 HOXB7P09629 217 aa12.14□□□□□ -0.47
LCN2-205ENST00000487719 FKBP8Q14318 412 aa12.14□□□□□ -0.47
LCN2-205ENST00000487719 CCDC27Q2M243 656 aa12.14□□□□□ -0.47
LCN2-205ENST00000487719 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
LCN2-205ENST00000487719 TBC1D2BQ9UPU7 963 aa12.14□□□□□ -0.47
LCN2-205ENST00000487719 ANKRD36CQ5JPF3 1778 aa12.14□□□□□ -0.47
LCN2-205ENST00000487719 BRCA1P38398 1863 aaKnown RBP12.14□□□□□ -0.47
LCN2-205ENST00000487719 PRAMEF22A3QJZ6 481 aa12.13□□□□□ -0.47
LCN2-205ENST00000487719 EIF2S2P20042 333 aaKnown RBP12.13□□□□□ -0.47
LCN2-205ENST00000487719 DIEXFQ68CQ4 756 aaKnown RBP12.13□□□□□ -0.47
LCN2-205ENST00000487719 NRXN2Q9P2S2 1712 aa12.13□□□□□ -0.47
LCN2-205ENST00000487719 CARMIL3Q8ND23 1372 aa12.13□□□□□ -0.47
LCN2-205ENST00000487719 CACNA1SQ13698 1873 aa12.12□□□□□ -0.47
LCN2-205ENST00000487719 ARFGEF1Q9Y6D6 1849 aa12.12□□□□□ -0.47
LCN2-205ENST00000487719 CCER2I3L3R5 266 aa12.12□□□□□ -0.47
LCN2-205ENST00000487719 RGL2O15211 777 aa12.12□□□□□ -0.47
LCN2-205ENST00000487719 CLEC4GQ6UXB4 293 aa12.12□□□□□ -0.47
LCN2-205ENST00000487719 SETDB2Q96T68 719 aa12.12□□□□□ -0.47
LCN2-205ENST00000487719 DLEC1Q9Y238 1755 aa12.12□□□□□ -0.47
LCN2-205ENST00000487719 C10orf71Q711Q0 1435 aa12.11□□□□□ -0.47
LCN2-205ENST00000487719 GRIN3BO60391 1043 aa12.11□□□□□ -0.47
LCN2-205ENST00000487719 MYL6BP14649 208 aa12.11□□□□□ -0.47
LCN2-205ENST00000487719 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
LCN2-205ENST00000487719 TGFB2P61812 414 aa12.11□□□□□ -0.47
LCN2-205ENST00000487719 HDGFL1Q5TGJ6 251 aa12.11□□□□□ -0.47
LCN2-205ENST00000487719 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
LCN2-205ENST00000487719 MBIPQ9NS73 344 aa12.11□□□□□ -0.47
LCN2-205ENST00000487719 IL16Q14005 1332 aa12.11□□□□□ -0.47
LCN2-205ENST00000487719 POLRMTO00411 1230 aaKnown RBP12.1□□□□□ -0.47
LCN2-205ENST00000487719 TM4SF1P30408 202 aa12.1□□□□□ -0.47
LCN2-205ENST00000487719 ST5P78524 1137 aa12.1□□□□□ -0.47
LCN2-205ENST00000487719 NFIXQ14938 502 aa12.1□□□□□ -0.47
LCN2-205ENST00000487719 WWC1Q8IX03 1113 aa12.1□□□□□ -0.47
LCN2-205ENST00000487719 NLGN2Q8NFZ4 835 aa12.1□□□□□ -0.47
LCN2-205ENST00000487719 SALL2Q9Y467 1007 aaPredicted RBP12.1□□□□□ -0.47
LCN2-205ENST00000487719 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
LCN2-205ENST00000487719 ERVV-1B6SEH8 477 aa12.09□□□□□ -0.47
LCN2-205ENST00000487719 CAMTA2O94983 1202 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms