RNA–Protein interactions for RNA: ENST00000487006.2

BUD23-217, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-217ENST00000487006 ZBTB1Q9Y2K1 713 aa28.28■■■□□ 2.12
BUD23-217ENST00000487006 PRAMEF22A3QJZ6 481 aa28.27■■■□□ 2.12
BUD23-217ENST00000487006 ARHGEF1Q92888 912 aaKnown RBP28.27■■■□□ 2.12
BUD23-217ENST00000487006 SENP3-EIF4A1A0A087X0R7 540 aa28.25■■■□□ 2.11
BUD23-217ENST00000487006 ADRA2BP18089 450 aa28.25■■■□□ 2.11
BUD23-217ENST00000487006 SOS1Q07889 1333 aaPredicted RBP28.24■■■□□ 2.11
BUD23-217ENST00000487006 STARD3NLO95772 234 aa28.24■■■□□ 2.11
BUD23-217ENST00000487006 POLD1P28340 1107 aa28.24■■■□□ 2.11
BUD23-217ENST00000487006 ARXQ96QS3 562 aa28.24■■■□□ 2.11
BUD23-217ENST00000487006 LAMB4A4D0S4 1761 aa28.22■■■□□ 2.11
BUD23-217ENST00000487006 CANXP27824 592 aaKnown RBP28.22■■■□□ 2.11
BUD23-217ENST00000487006 RFC4P35249 363 aa28.22■■■□□ 2.11
BUD23-217ENST00000487006 TEX13AQ9BXU3 409 aaPredicted RBP28.22■■■□□ 2.11
BUD23-217ENST00000487006 USP16Q9Y5T5 823 aa28.22■■■□□ 2.11
BUD23-217ENST00000487006 SNRPA1P09661 255 aaKnown RBP28.21■■■□□ 2.11
BUD23-217ENST00000487006 SRP68Q9UHB9 627 aaKnown RBP28.21■■■□□ 2.11
BUD23-217ENST00000487006 TSPYL4Q9UJ04 414 aa28.21■■■□□ 2.11
BUD23-217ENST00000487006 EIF4A1P60842 406 aaKnown RBP28.2■■■□□ 2.1
BUD23-217ENST00000487006 COL15A1P39059 1388 aa28.2■■■□□ 2.1
BUD23-217ENST00000487006 A1BGP04217 495 aa28.19■■■□□ 2.1
BUD23-217ENST00000487006 FHDC1Q9C0D6 1143 aaPredicted RBP28.19■■■□□ 2.1
BUD23-217ENST00000487006 GYS1P13807 737 aa28.18■■■□□ 2.1
BUD23-217ENST00000487006 PIP4K2AP48426 406 aaPredicted RBP28.18■■■□□ 2.1
BUD23-217ENST00000487006 USP42Q9H9J4 1324 aaKnown RBP28.18■■■□□ 2.1
BUD23-217ENST00000487006 FAM9BQ8IZU0 186 aa28.17■■■□□ 2.1
BUD23-217ENST00000487006 KLHL34Q8N239 644 aa28.16■■■□□ 2.1
BUD23-217ENST00000487006 ZNF330Q9Y3S2 320 aaPredicted RBP28.16■■■□□ 2.1
BUD23-217ENST00000487006 LAS1LQ9Y4W2 734 aaKnown RBP28.16■■■□□ 2.1
BUD23-217ENST00000487006 EIF5P55010 431 aaKnown RBP28.15■■■□□ 2.1
BUD23-217ENST00000487006 GIGYF1O75420 1035 aaPredicted RBP28.14■■■□□ 2.1
BUD23-217ENST00000487006 CHL1O00533 1208 aa28.13■■■□□ 2.09
BUD23-217ENST00000487006 MMP10P09238 476 aa28.13■■■□□ 2.09
BUD23-217ENST00000487006 SYT17Q9BSW7 474 aa28.13■■■□□ 2.09
BUD23-217ENST00000487006 BABAM1Q9NWV8 329 aa28.13■■■□□ 2.09
BUD23-217ENST00000487006 FKBP8Q14318 412 aa28.12■■■□□ 2.09
BUD23-217ENST00000487006 USPL1Q5W0Q7 1092 aa28.12■■■□□ 2.09
BUD23-217ENST00000487006 ZPR1O75312 459 aa28.11■■■□□ 2.09
BUD23-217ENST00000487006 IL6STP40189 918 aaPredicted RBP28.11■■■□□ 2.09
BUD23-217ENST00000487006 NLGN1Q8N2Q7 840 aa28.11■■■□□ 2.09
BUD23-217ENST00000487006 SCN7AQ01118 1682 aa28.1■■■□□ 2.09
BUD23-217ENST00000487006 NBPF26B4DH59 902 aa28.1■■■□□ 2.09
BUD23-217ENST00000487006 NBPF10Q6P3W6 841 aaKnown RBP28.1■■■□□ 2.09
BUD23-217ENST00000487006 NBPF15Q8N660 670 aa28.1■■■□□ 2.09
BUD23-217ENST00000487006 NARFQ9UHQ1 456 aa28.1■■■□□ 2.09
BUD23-217ENST00000487006 KRT24Q2M2I5 525 aa28.09■■■□□ 2.09
BUD23-217ENST00000487006 CFAP44Q96MT7 982 aa28.08■■■□□ 2.09
BUD23-217ENST00000487006 BCL2L12Q9HB09 334 aa28.08■■■□□ 2.09
BUD23-217ENST00000487006 TBC1D2BQ9UPU7 963 aa28.08■■■□□ 2.09
BUD23-217ENST00000487006 A0A087WZG4 1122 aa28.07■■■□□ 2.08
BUD23-217ENST00000487006 DIEXFQ68CQ4 756 aaKnown RBP28.07■■■□□ 2.08
BUD23-217ENST00000487006 BCORQ6W2J9 1755 aa28.06■■■□□ 2.08
BUD23-217ENST00000487006 ZNF853P0CG23 659 aa28.06■■■□□ 2.08
BUD23-217ENST00000487006 NLGN2Q8NFZ4 835 aa28.06■■■□□ 2.08
BUD23-217ENST00000487006 MBIPQ9NS73 344 aa28.06■■■□□ 2.08
BUD23-217ENST00000487006 SALL2Q9Y467 1007 aaPredicted RBP28.06■■■□□ 2.08
BUD23-217ENST00000487006 IFT57Q9NWB7 429 aa28.05■■■□□ 2.08
BUD23-217ENST00000487006 CALD1Q05682 793 aaKnown RBP28.04■■■□□ 2.08
BUD23-217ENST00000487006 DDR1Q08345 913 aa28.04■■■□□ 2.08
BUD23-217ENST00000487006 CCDC27Q2M243 656 aa28.04■■■□□ 2.08
BUD23-217ENST00000487006 WWC1Q8IX03 1113 aa28.04■■■□□ 2.08
BUD23-217ENST00000487006 NPM2Q86SE8 214 aaKnown RBP28.03■■■□□ 2.08
BUD23-217ENST00000487006 EIF2S2P20042 333 aaKnown RBP28.02■■■□□ 2.08
BUD23-217ENST00000487006 GNAI1P63096 354 aa28.02■■■□□ 2.08
BUD23-217ENST00000487006 DZIP3Q86Y13 1208 aaKnown RBP28.02■■■□□ 2.08
BUD23-217ENST00000487006 CCER2I3L3R5 266 aa28.01■■■□□ 2.07
BUD23-217ENST00000487006 CAMTA2O94983 1202 aa28.01■■■□□ 2.07
BUD23-217ENST00000487006 PARP3Q9Y6F1 533 aa28.01■■■□□ 2.07
BUD23-217ENST00000487006 AFDNP55196 1824 aaKnown RBP28.01■■■□□ 2.07
BUD23-217ENST00000487006 KIF13BQ9NQT8 1826 aa28.01■■■□□ 2.07
BUD23-217ENST00000487006 TM4SF1P30408 202 aa28■■■□□ 2.07
BUD23-217ENST00000487006 NFIXQ14938 502 aa28■■■□□ 2.07
BUD23-217ENST00000487006 NECTIN2Q92692 538 aa28■■■□□ 2.07
BUD23-217ENST00000487006 MYL6BP14649 208 aa27.99■■■□□ 2.07
BUD23-217ENST00000487006 NGEFQ8N5V2 710 aa27.99■■■□□ 2.07
BUD23-217ENST00000487006 CD2APQ9Y5K6 639 aa27.99■■■□□ 2.07
BUD23-217ENST00000487006 POLRMTO00411 1230 aaKnown RBP27.98■■■□□ 2.07
BUD23-217ENST00000487006 BICDL1Q6ZP65 573 aa27.98■■■□□ 2.07
BUD23-217ENST00000487006 C10orf71Q711Q0 1435 aa27.98■■■□□ 2.07
BUD23-217ENST00000487006 NCBP3Q53F19 620 aaKnown RBP27.97■■■□□ 2.07
BUD23-217ENST00000487006 TBC1D9BQ66K14 1250 aa27.97■■■□□ 2.07
BUD23-217ENST00000487006 ANXA1P04083 346 aa27.96■■■□□ 2.07
BUD23-217ENST00000487006 PDIA6Q15084 440 aa27.96■■■□□ 2.07
BUD23-217ENST00000487006 PROSER3Q2NL68 480 aa27.96■■■□□ 2.07
BUD23-217ENST00000487006 MIER1Q8N108 512 aa27.96■■■□□ 2.07
BUD23-217ENST00000487006 TSR2Q969E8 191 aaKnown RBP27.96■■■□□ 2.07
BUD23-217ENST00000487006 KIAA1551Q9HCM1 1747 aa27.95■■■□□ 2.07
BUD23-217ENST00000487006 ERBB4Q15303 1308 aa27.95■■■□□ 2.07
BUD23-217ENST00000487006 DUSP27Q5VZP5 1158 aa27.95■■■□□ 2.06
BUD23-217ENST00000487006 NRXN2Q9P2S2 1712 aa27.95■■■□□ 2.06
BUD23-217ENST00000487006 N4BP2Q86UW6 1770 aaPredicted RBP27.94■■■□□ 2.06
BUD23-217ENST00000487006 TTLL7Q6ZT98 887 aa27.94■■■□□ 2.06
BUD23-217ENST00000487006 LRP10Q7Z4F1 713 aa27.93■■■□□ 2.06
BUD23-217ENST00000487006 ELL2O00472 640 aaPredicted RBP27.92■■■□□ 2.06
BUD23-217ENST00000487006 HDGFL1Q5TGJ6 251 aa27.92■■■□□ 2.06
BUD23-217ENST00000487006 NUP98P52948 1817 aa27.92■■■□□ 2.06
BUD23-217ENST00000487006 IL16Q14005 1332 aa27.92■■■□□ 2.06
BUD23-217ENST00000487006 HOXB7P09629 217 aa27.91■■■□□ 2.06
BUD23-217ENST00000487006 C8orf58Q8NAV2 365 aa27.91■■■□□ 2.06
BUD23-217ENST00000487006 PXDNLA1KZ92 1463 aa27.9■■■□□ 2.06
BUD23-217ENST00000487006 SERPINB2P05120 415 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms