RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 RTCBQ9Y3I0 505 aaKnown RBP15.15■□□□□ 0.02
LINC00996-202ENST00000486954 MSH5O43196 834 aa15.14■□□□□ 0.01
LINC00996-202ENST00000486954 PHF14O94880 888 aa15.14■□□□□ 0.01
LINC00996-202ENST00000486954 ZNF853P0CG23 659 aa15.14■□□□□ 0.01
LINC00996-202ENST00000486954 CYP19A1P11511 503 aaPredicted RBP15.14■□□□□ 0.01
LINC00996-202ENST00000486954 HNRNPUQ00839 825 aaKnown RBP eCLIP15.14■□□□□ 0.01
LINC00996-202ENST00000486954 GIGYF1O75420 1035 aaPredicted RBP15.13■□□□□ 0.01
LINC00996-202ENST00000486954 ADRA2BP18089 450 aa15.13■□□□□ 0.01
LINC00996-202ENST00000486954 PNPLA7Q6ZV29 1317 aa15.13■□□□□ 0.01
LINC00996-202ENST00000486954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.12■□□□□ 0.01
LINC00996-202ENST00000486954 RPS6KA4O75676 772 aa15.12■□□□□ 0.01
LINC00996-202ENST00000486954 HOXB7P09629 217 aa15.12■□□□□ 0.01
LINC00996-202ENST00000486954 GOLGA2Q08379 1002 aa15.12■□□□□ 0.01
LINC00996-202ENST00000486954 ZBTB1Q9Y2K1 713 aa15.12■□□□□ 0.01
LINC00996-202ENST00000486954 MYH14Q7Z406 1995 aaKnown RBP15.12■□□□□ 0.01
LINC00996-202ENST00000486954 ZNF521Q96K83 1311 aa15.12■□□□□ 0.01
LINC00996-202ENST00000486954 CASZ1Q86V15 1759 aa15.11■□□□□ 0.01
LINC00996-202ENST00000486954 PRAMEF22A3QJZ6 481 aa15.11■□□□□ 0.01
LINC00996-202ENST00000486954 CANXP27824 592 aaKnown RBP15.11■□□□□ 0.01
LINC00996-202ENST00000486954 TSR2Q969E8 191 aaKnown RBP15.11■□□□□ 0.01
LINC00996-202ENST00000486954 CHMP4AQ9BY43 222 aa15.11■□□□□ 0.01
LINC00996-202ENST00000486954 ZNF330Q9Y3S2 320 aaPredicted RBP15.11■□□□□ 0.01
LINC00996-202ENST00000486954 USP16Q9Y5T5 823 aa15.11■□□□□ 0.01
LINC00996-202ENST00000486954 FANCIQ9NVI1 1328 aa15.11■□□□□ 0.01
LINC00996-202ENST00000486954 COL15A1P39059 1388 aa15.11■□□□□ 0.01
LINC00996-202ENST00000486954 E9PSI1 815 aa15.1■□□□□ 0.01
LINC00996-202ENST00000486954 EIF2S2P20042 333 aaKnown RBP15.1■□□□□ 0.01
LINC00996-202ENST00000486954 TRAPPC3LQ5T215 181 aa15.1■□□□□ 0.01
LINC00996-202ENST00000486954 INTS5Q6P9B9 1019 aaKnown RBP15.1■□□□□ 0.01
LINC00996-202ENST00000486954 SOS1Q07889 1333 aaPredicted RBP15.1■□□□□ 0.01
LINC00996-202ENST00000486954 ERBB4Q15303 1308 aa15.1■□□□□ 0.01
LINC00996-202ENST00000486954 A0A087WZG4 1122 aa15.09■□□□□ 0.01
LINC00996-202ENST00000486954 RFC4P35249 363 aa15.09■□□□□ 0.01
LINC00996-202ENST00000486954 IL6STP40189 918 aaPredicted RBP15.09■□□□□ 0.01
LINC00996-202ENST00000486954 HDGFL1Q5TGJ6 251 aa15.09■□□□□ 0.01
LINC00996-202ENST00000486954 DUSP27Q5VZP5 1158 aa15.09■□□□□ 0.01
LINC00996-202ENST00000486954 SLC16A10Q8TF71 515 aa15.09■□□□□ 0.01
LINC00996-202ENST00000486954 C4AP0C0L4 1744 aa15.09■□□□□ 0.01
LINC00996-202ENST00000486954 A1BGP04217 495 aa15.08■□□□□ 0
LINC00996-202ENST00000486954 KRT24Q2M2I5 525 aa15.08■□□□□ 0
LINC00996-202ENST00000486954 COL23A1Q86Y22 540 aaPredicted RBP15.08■□□□□ 0
LINC00996-202ENST00000486954 MTFR1LQ9H019 292 aa15.07■□□□□ 0
LINC00996-202ENST00000486954 ELL2O00472 640 aaPredicted RBP15.06■□□□□ 0
LINC00996-202ENST00000486954 ZPR1O75312 459 aa15.06■□□□□ 0
LINC00996-202ENST00000486954 TWISTNBQ3B726 338 aaPredicted RBP15.06■□□□□ 0
LINC00996-202ENST00000486954 NECTIN2Q92692 538 aa15.06■□□□□ 0
LINC00996-202ENST00000486954 ARHGEF1Q92888 912 aaKnown RBP15.06■□□□□ 0
LINC00996-202ENST00000486954 ARXQ96QS3 562 aa15.06■□□□□ 0
LINC00996-202ENST00000486954 ZBED9Q6R2W3 1325 aa15.06■□□□□ 0
LINC00996-202ENST00000486954 ZBTB7AO95365 584 aa15.05■□□□□ -0
LINC00996-202ENST00000486954 MYL6BP14649 208 aa15.05■□□□□ -0
LINC00996-202ENST00000486954 PIP4K2AP48426 406 aaPredicted RBP15.05■□□□□ -0
LINC00996-202ENST00000486954 EIF5P55010 431 aaKnown RBP15.05■□□□□ -0
LINC00996-202ENST00000486954 AMIGO3Q86WK7 504 aa15.05■□□□□ -0
LINC00996-202ENST00000486954 SPON1Q9HCB6 807 aa15.05■□□□□ -0
LINC00996-202ENST00000486954 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ -0
LINC00996-202ENST00000486954 SCN7AQ01118 1682 aa15.04■□□□□ -0
LINC00996-202ENST00000486954 USP42Q9H9J4 1324 aaKnown RBP15.04■□□□□ -0
LINC00996-202ENST00000486954 EXOSC9Q06265 439 aaKnown RBP15.04■□□□□ -0
LINC00996-202ENST00000486954 SLFN5Q08AF3 891 aa15.04■□□□□ -0
LINC00996-202ENST00000486954 CCDC30Q5VVM6 783 aa15.04■□□□□ -0
LINC00996-202ENST00000486954 SMIM5Q71RC9 77 aa15.04■□□□□ -0
LINC00996-202ENST00000486954 DZIP3Q86Y13 1208 aaKnown RBP15.04■□□□□ -0
LINC00996-202ENST00000486954 C8orf58Q8NAV2 365 aa15.04■□□□□ -0
LINC00996-202ENST00000486954 STK31Q9BXU1 1019 aa15.04■□□□□ -0
LINC00996-202ENST00000486954 PDGFDQ9GZP0 370 aaPredicted RBP15.04■□□□□ -0
LINC00996-202ENST00000486954 NBPF26B4DH59 902 aa15.03■□□□□ -0
LINC00996-202ENST00000486954 POLD1P28340 1107 aa15.03■□□□□ -0
LINC00996-202ENST00000486954 NBPF10Q6P3W6 841 aaKnown RBP15.03■□□□□ -0
LINC00996-202ENST00000486954 KIF6Q6ZMV9 814 aa15.03■□□□□ -0
LINC00996-202ENST00000486954 NBPF15Q8N660 670 aa15.03■□□□□ -0
LINC00996-202ENST00000486954 DBF4Q9UBU7 674 aaPredicted RBP15.03■□□□□ -0
LINC00996-202ENST00000486954 NARFQ9UHQ1 456 aa15.03■□□□□ -0
LINC00996-202ENST00000486954 MSL1Q68DK7 614 aa15.02■□□□□ -0
LINC00996-202ENST00000486954 TSPYL6Q8N831 410 aa15.02■□□□□ -0
LINC00996-202ENST00000486954 DDX21Q9NR30 783 aaKnown RBP eCLIP15.02■□□□□ -0
LINC00996-202ENST00000486954 CHPF2Q9P2E5 772 aa15.02■□□□□ -0
LINC00996-202ENST00000486954 ATF5Q9Y2D1 282 aaPredicted RBP15.02■□□□□ -0
LINC00996-202ENST00000486954 ZNF652Q9Y2D9 606 aa15.02■□□□□ -0
LINC00996-202ENST00000486954 BCORQ6W2J9 1755 aa15.02□□□□□ -0.01
LINC00996-202ENST00000486954 LRP5O75197 1615 aa15.02□□□□□ -0.01
LINC00996-202ENST00000486954 USPL1Q5W0Q7 1092 aa15.01□□□□□ -0.01
LINC00996-202ENST00000486954 NLGN1Q8N2Q7 840 aa15.01□□□□□ -0.01
LINC00996-202ENST00000486954 CDCA7LQ96GN5 454 aa15.01□□□□□ -0.01
LINC00996-202ENST00000486954 HYPKQ9NX55 129 aa15.01□□□□□ -0.01
LINC00996-202ENST00000486954 SRP68Q9UHB9 627 aaKnown RBP15.01□□□□□ -0.01
LINC00996-202ENST00000486954 TBC1D2BQ9UPU7 963 aa15.01□□□□□ -0.01
LINC00996-202ENST00000486954 GYS1P13807 737 aa15□□□□□ -0.01
LINC00996-202ENST00000486954 PPP1R1BQ9UD71 204 aaPredicted RBP15□□□□□ -0.01
LINC00996-202ENST00000486954 ANXA1P04083 346 aa14.99□□□□□ -0.01
LINC00996-202ENST00000486954 MAP3K15Q6ZN16 1313 aa14.98□□□□□ -0.01
LINC00996-202ENST00000486954 COL24A1Q17RW2 1714 aa14.98□□□□□ -0.01
LINC00996-202ENST00000486954 RGL2O15211 777 aa14.98□□□□□ -0.01
LINC00996-202ENST00000486954 VAMP4O75379 141 aa14.98□□□□□ -0.01
LINC00996-202ENST00000486954 CAMTA2O94983 1202 aa14.98□□□□□ -0.01
LINC00996-202ENST00000486954 CT47B1P0C2W7 299 aaPredicted RBP14.98□□□□□ -0.01
LINC00996-202ENST00000486954 AIMP1Q12904 312 aaKnown RBP14.98□□□□□ -0.01
LINC00996-202ENST00000486954 PDIA6Q15084 440 aa14.98□□□□□ -0.01
LINC00996-202ENST00000486954 PROSER3Q2NL68 480 aa14.98□□□□□ -0.01
LINC00996-202ENST00000486954 CACNA1FO60840 1977 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms