RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 CRKLP46109 303 aaKnown RBP24.73■■□□□ 1.55
ATG9A-221ENST00000486766 SPINK5Q9NQ38 1064 aaPredicted RBP24.73■■□□□ 1.55
ATG9A-221ENST00000486766 TFCP2L1Q9NZI6 479 aa24.73■■□□□ 1.55
ATG9A-221ENST00000486766 GNPATO15228 680 aa24.72■■□□□ 1.55
ATG9A-221ENST00000486766 KRT24Q2M2I5 525 aa24.72■■□□□ 1.55
ATG9A-221ENST00000486766 RC3H1Q5TC82 1133 aaKnown RBP24.71■■□□□ 1.55
ATG9A-221ENST00000486766 CCDC87Q9NVE4 849 aa24.71■■□□□ 1.55
ATG9A-221ENST00000486766 USP16Q9Y5T5 823 aa24.71■■□□□ 1.55
ATG9A-221ENST00000486766 E9PSI1 815 aa24.7■■□□□ 1.54
ATG9A-221ENST00000486766 R3HDM1Q15032 1099 aaKnown RBP24.7■■□□□ 1.54
ATG9A-221ENST00000486766 ZBED9Q6R2W3 1325 aa24.69■■□□□ 1.54
ATG9A-221ENST00000486766 PSDA5PKW4 1024 aaPredicted RBP24.68■■□□□ 1.54
ATG9A-221ENST00000486766 DUSP27Q5VZP5 1158 aa24.68■■□□□ 1.54
ATG9A-221ENST00000486766 RTCBQ9Y3I0 505 aaKnown RBP24.68■■□□□ 1.54
ATG9A-221ENST00000486766 C4AP0C0L4 1744 aa24.68■■□□□ 1.54
ATG9A-221ENST00000486766 ELL2O00472 640 aaPredicted RBP24.67■■□□□ 1.54
ATG9A-221ENST00000486766 PHF14O94880 888 aa24.67■■□□□ 1.54
ATG9A-221ENST00000486766 EIF2S2P20042 333 aaKnown RBP24.67■■□□□ 1.54
ATG9A-221ENST00000486766 INTS5Q6P9B9 1019 aaKnown RBP24.67■■□□□ 1.54
ATG9A-221ENST00000486766 CDCA7LQ96GN5 454 aa24.67■■□□□ 1.54
ATG9A-221ENST00000486766 ZBTB1Q9Y2K1 713 aa24.67■■□□□ 1.54
ATG9A-221ENST00000486766 CASZ1Q86V15 1759 aa24.67■■□□□ 1.54
ATG9A-221ENST00000486766 A1BGP04217 495 aa24.66■■□□□ 1.54
ATG9A-221ENST00000486766 HOXB7P09629 217 aa24.66■■□□□ 1.54
ATG9A-221ENST00000486766 CANXP27824 592 aaKnown RBP24.66■■□□□ 1.54
ATG9A-221ENST00000486766 SLFN5Q08AF3 891 aa24.66■■□□□ 1.54
ATG9A-221ENST00000486766 C8orf58Q8NAV2 365 aa24.66■■□□□ 1.54
ATG9A-221ENST00000486766 RPS6KA4O75676 772 aa24.65■■□□□ 1.54
ATG9A-221ENST00000486766 SSFA2P28290 1259 aa24.65■■□□□ 1.54
ATG9A-221ENST00000486766 PNPLA7Q6ZV29 1317 aa24.64■■□□□ 1.54
ATG9A-221ENST00000486766 EXOSC9Q06265 439 aaKnown RBP24.64■■□□□ 1.54
ATG9A-221ENST00000486766 NECTIN2Q92692 538 aa24.64■■□□□ 1.54
ATG9A-221ENST00000486766 YTHDC1Q96MU7 727 aaKnown RBP24.64■■□□□ 1.54
ATG9A-221ENST00000486766 ZNF330Q9Y3S2 320 aaPredicted RBP24.64■■□□□ 1.54
ATG9A-221ENST00000486766 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.63■■□□□ 1.53
ATG9A-221ENST00000486766 MSH5O43196 834 aa24.63■■□□□ 1.53
ATG9A-221ENST00000486766 PIP4K2AP48426 406 aaPredicted RBP24.63■■□□□ 1.53
ATG9A-221ENST00000486766 TWISTNBQ3B726 338 aaPredicted RBP24.63■■□□□ 1.53
ATG9A-221ENST00000486766 HDGFL1Q5TGJ6 251 aa24.63■■□□□ 1.53
ATG9A-221ENST00000486766 SMIM5Q71RC9 77 aa24.63■■□□□ 1.53
ATG9A-221ENST00000486766 AMIGO3Q86WK7 504 aa24.63■■□□□ 1.53
ATG9A-221ENST00000486766 TSPYL6Q8N831 410 aa24.63■■□□□ 1.53
ATG9A-221ENST00000486766 FLAD1Q8NFF5 587 aa24.63■■□□□ 1.53
ATG9A-221ENST00000486766 SOS1Q07889 1333 aaPredicted RBP24.62■■□□□ 1.53
ATG9A-221ENST00000486766 NPM2Q86SE8 214 aaKnown RBP24.62■■□□□ 1.53
ATG9A-221ENST00000486766 COL15A1P39059 1388 aa24.62■■□□□ 1.53
ATG9A-221ENST00000486766 TRAPPC3LQ5T215 181 aa24.61■■□□□ 1.53
ATG9A-221ENST00000486766 ERBB4Q15303 1308 aa24.61■■□□□ 1.53
ATG9A-221ENST00000486766 ADRA2BP18089 450 aa24.6■■□□□ 1.53
ATG9A-221ENST00000486766 IL6STP40189 918 aaPredicted RBP24.6■■□□□ 1.53
ATG9A-221ENST00000486766 MYL6BP14649 208 aa24.59■■□□□ 1.53
ATG9A-221ENST00000486766 COL23A1Q86Y22 540 aaPredicted RBP24.59■■□□□ 1.53
ATG9A-221ENST00000486766 CHMP4AQ9BY43 222 aa24.59■■□□□ 1.53
ATG9A-221ENST00000486766 NBPF26B4DH59 902 aa24.58■■□□□ 1.53
ATG9A-221ENST00000486766 NBPF10Q6P3W6 841 aaKnown RBP24.58■■□□□ 1.53
ATG9A-221ENST00000486766 TRMT2AQ8IZ69 625 aaKnown RBP24.58■■□□□ 1.53
ATG9A-221ENST00000486766 NBPF15Q8N660 670 aa24.58■■□□□ 1.53
ATG9A-221ENST00000486766 CACNA1FO60840 1977 aa24.58■■□□□ 1.52
ATG9A-221ENST00000486766 BCORQ6W2J9 1755 aa24.57■■□□□ 1.52
ATG9A-221ENST00000486766 RFC4P35249 363 aa24.57■■□□□ 1.52
ATG9A-221ENST00000486766 EIF5P55010 431 aaKnown RBP24.57■■□□□ 1.52
ATG9A-221ENST00000486766 ARHGEF1Q92888 912 aaKnown RBP24.57■■□□□ 1.52
ATG9A-221ENST00000486766 ARXQ96QS3 562 aa24.57■■□□□ 1.52
ATG9A-221ENST00000486766 PDGFDQ9GZP0 370 aaPredicted RBP24.57■■□□□ 1.52
ATG9A-221ENST00000486766 CHPF2Q9P2E5 772 aa24.57■■□□□ 1.52
ATG9A-221ENST00000486766 SCN7AQ01118 1682 aa24.56■■□□□ 1.52
ATG9A-221ENST00000486766 CCDC30Q5VVM6 783 aa24.56■■□□□ 1.52
ATG9A-221ENST00000486766 A0A087WZG4 1122 aa24.55■■□□□ 1.52
ATG9A-221ENST00000486766 ANXA1P04083 346 aa24.55■■□□□ 1.52
ATG9A-221ENST00000486766 DBF4Q9UBU7 674 aaPredicted RBP24.55■■□□□ 1.52
ATG9A-221ENST00000486766 VAMP4O75379 141 aa24.54■■□□□ 1.52
ATG9A-221ENST00000486766 PROSER3Q2NL68 480 aa24.54■■□□□ 1.52
ATG9A-221ENST00000486766 DDX21Q9NR30 783 aaKnown RBP eCLIP24.54■■□□□ 1.52
ATG9A-221ENST00000486766 ZPR1O75312 459 aa24.53■■□□□ 1.52
ATG9A-221ENST00000486766 PDIA6Q15084 440 aa24.53■■□□□ 1.52
ATG9A-221ENST00000486766 STK31Q9BXU1 1019 aa24.53■■□□□ 1.52
ATG9A-221ENST00000486766 TCERG1O14776 1098 aaKnown RBP24.51■■□□□ 1.51
ATG9A-221ENST00000486766 ZBTB7AO95365 584 aa24.51■■□□□ 1.51
ATG9A-221ENST00000486766 DZIP3Q86Y13 1208 aaKnown RBP24.51■■□□□ 1.51
ATG9A-221ENST00000486766 SLC16A10Q8TF71 515 aa24.51■■□□□ 1.51
ATG9A-221ENST00000486766 SRP68Q9UHB9 627 aaKnown RBP24.51■■□□□ 1.51
ATG9A-221ENST00000486766 TBC1D2BQ9UPU7 963 aa24.51■■□□□ 1.51
ATG9A-221ENST00000486766 USP42Q9H9J4 1324 aaKnown RBP24.51■■□□□ 1.51
ATG9A-221ENST00000486766 HYPKQ9NX55 129 aa24.5■■□□□ 1.51
ATG9A-221ENST00000486766 NARFQ9UHQ1 456 aa24.5■■□□□ 1.51
ATG9A-221ENST00000486766 NUP98P52948 1817 aa24.49■■□□□ 1.51
ATG9A-221ENST00000486766 KIF6Q6ZMV9 814 aa24.49■■□□□ 1.51
ATG9A-221ENST00000486766 COL24A1Q17RW2 1714 aa24.49■■□□□ 1.51
ATG9A-221ENST00000486766 AIMP1Q12904 312 aaKnown RBP24.48■■□□□ 1.51
ATG9A-221ENST00000486766 USPL1Q5W0Q7 1092 aa24.48■■□□□ 1.51
ATG9A-221ENST00000486766 MSL1Q68DK7 614 aa24.48■■□□□ 1.51
ATG9A-221ENST00000486766 LRP10Q7Z4F1 713 aa24.48■■□□□ 1.51
ATG9A-221ENST00000486766 MTFR1LQ9H019 292 aa24.48■■□□□ 1.51
ATG9A-221ENST00000486766 CT47B1P0C2W7 299 aaPredicted RBP24.47■■□□□ 1.51
ATG9A-221ENST00000486766 TTLL7Q6ZT98 887 aa24.47■■□□□ 1.51
ATG9A-221ENST00000486766 XAGE3Q8WTP9 111 aa24.47■■□□□ 1.51
ATG9A-221ENST00000486766 ARFGEF2Q9Y6D5 1785 aa24.47■■□□□ 1.51
ATG9A-221ENST00000486766 SLC4A2P04920 1241 aa24.46■■□□□ 1.51
ATG9A-221ENST00000486766 GYS1P13807 737 aa24.46■■□□□ 1.51
ATG9A-221ENST00000486766 COPS6Q7L5N1 327 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms