RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 TEX13AQ9BXU3 409 aaPredicted RBP23.94■■□□□ 1.42
COL1A1-207ENST00000486572 STARD3NLO95772 234 aa23.93■■□□□ 1.42
COL1A1-207ENST00000486572 ARHGEF1Q92888 912 aaKnown RBP23.92■■□□□ 1.42
COL1A1-207ENST00000486572 MIS18AQ9NYP9 233 aa23.92■■□□□ 1.42
COL1A1-207ENST00000486572 RFC4P35249 363 aa23.91■■□□□ 1.42
COL1A1-207ENST00000486572 ZBTB1Q9Y2K1 713 aa23.91■■□□□ 1.42
COL1A1-207ENST00000486572 SOS1Q07889 1333 aaPredicted RBP23.9■■□□□ 1.42
COL1A1-207ENST00000486572 SNRPA1P09661 255 aaKnown RBP23.89■■□□□ 1.41
COL1A1-207ENST00000486572 TRIM35Q9UPQ4 493 aa23.89■■□□□ 1.41
COL1A1-207ENST00000486572 APAF1O14727 1248 aa23.88■■□□□ 1.41
COL1A1-207ENST00000486572 FHDC1Q9C0D6 1143 aaPredicted RBP23.88■■□□□ 1.41
COL1A1-207ENST00000486572 COL15A1P39059 1388 aa23.88■■□□□ 1.41
COL1A1-207ENST00000486572 USP42Q9H9J4 1324 aaKnown RBP23.86■■□□□ 1.41
COL1A1-207ENST00000486572 CANXP27824 592 aaKnown RBP23.86■■□□□ 1.41
COL1A1-207ENST00000486572 BABAM1Q9NWV8 329 aa23.86■■□□□ 1.41
COL1A1-207ENST00000486572 TSPYL4Q9UJ04 414 aa23.86■■□□□ 1.41
COL1A1-207ENST00000486572 LAMB4A4D0S4 1761 aa23.86■■□□□ 1.41
COL1A1-207ENST00000486572 PRAMEF22A3QJZ6 481 aa23.85■■□□□ 1.41
COL1A1-207ENST00000486572 GYS1P13807 737 aa23.85■■□□□ 1.41
COL1A1-207ENST00000486572 NLGN1Q8N2Q7 840 aa23.85■■□□□ 1.41
COL1A1-207ENST00000486572 USP16Q9Y5T5 823 aa23.85■■□□□ 1.41
COL1A1-207ENST00000486572 EIF4A1P60842 406 aaKnown RBP23.84■■□□□ 1.41
COL1A1-207ENST00000486572 SYT17Q9BSW7 474 aa23.84■■□□□ 1.41
COL1A1-207ENST00000486572 SRP68Q9UHB9 627 aaKnown RBP23.84■■□□□ 1.41
COL1A1-207ENST00000486572 EIF5P55010 431 aaKnown RBP23.83■■□□□ 1.41
COL1A1-207ENST00000486572 ZPR1O75312 459 aa23.82■■□□□ 1.4
COL1A1-207ENST00000486572 A1BGP04217 495 aa23.82■■□□□ 1.4
COL1A1-207ENST00000486572 IL6STP40189 918 aaPredicted RBP23.82■■□□□ 1.4
COL1A1-207ENST00000486572 KLHL34Q8N239 644 aa23.82■■□□□ 1.4
COL1A1-207ENST00000486572 GIGYF1O75420 1035 aaPredicted RBP23.81■■□□□ 1.4
COL1A1-207ENST00000486572 MMP10P09238 476 aa23.81■■□□□ 1.4
COL1A1-207ENST00000486572 NARFQ9UHQ1 456 aa23.81■■□□□ 1.4
COL1A1-207ENST00000486572 A0A087WZG4 1122 aa23.8■■□□□ 1.4
COL1A1-207ENST00000486572 ZNF330Q9Y3S2 320 aaPredicted RBP23.8■■□□□ 1.4
COL1A1-207ENST00000486572 CHL1O00533 1208 aa23.79■■□□□ 1.4
COL1A1-207ENST00000486572 USPL1Q5W0Q7 1092 aa23.79■■□□□ 1.4
COL1A1-207ENST00000486572 NPM2Q86SE8 214 aaKnown RBP23.79■■□□□ 1.4
COL1A1-207ENST00000486572 CALD1Q05682 793 aaKnown RBP23.78■■□□□ 1.4
COL1A1-207ENST00000486572 FKBP8Q14318 412 aa23.78■■□□□ 1.4
COL1A1-207ENST00000486572 LAS1LQ9Y4W2 734 aaKnown RBP23.78■■□□□ 1.4
COL1A1-207ENST00000486572 SCN7AQ01118 1682 aa23.78■■□□□ 1.4
COL1A1-207ENST00000486572 PIP4K2AP48426 406 aaPredicted RBP23.76■■□□□ 1.39
COL1A1-207ENST00000486572 CFAP44Q96MT7 982 aa23.76■■□□□ 1.39
COL1A1-207ENST00000486572 FAM9BQ8IZU0 186 aa23.75■■□□□ 1.39
COL1A1-207ENST00000486572 CD2APQ9Y5K6 639 aa23.75■■□□□ 1.39
COL1A1-207ENST00000486572 PARP3Q9Y6F1 533 aa23.75■■□□□ 1.39
COL1A1-207ENST00000486572 NBPF26B4DH59 902 aa23.74■■□□□ 1.39
COL1A1-207ENST00000486572 CCDC27Q2M243 656 aa23.74■■□□□ 1.39
COL1A1-207ENST00000486572 NBPF10Q6P3W6 841 aaKnown RBP23.74■■□□□ 1.39
COL1A1-207ENST00000486572 NBPF15Q8N660 670 aa23.74■■□□□ 1.39
COL1A1-207ENST00000486572 NLGN2Q8NFZ4 835 aa23.73■■□□□ 1.39
COL1A1-207ENST00000486572 BCL2L12Q9HB09 334 aa23.73■■□□□ 1.39
COL1A1-207ENST00000486572 IFT57Q9NWB7 429 aa23.73■■□□□ 1.39
COL1A1-207ENST00000486572 TBC1D2BQ9UPU7 963 aa23.73■■□□□ 1.39
COL1A1-207ENST00000486572 BCORQ6W2J9 1755 aa23.73■■□□□ 1.39
COL1A1-207ENST00000486572 SENP3-EIF4A1A0A087X0R7 540 aa23.72■■□□□ 1.39
COL1A1-207ENST00000486572 ZNF853P0CG23 659 aa23.72■■□□□ 1.39
COL1A1-207ENST00000486572 NCBP3Q53F19 620 aaKnown RBP23.72■■□□□ 1.39
COL1A1-207ENST00000486572 DZIP3Q86Y13 1208 aaKnown RBP23.72■■□□□ 1.39
COL1A1-207ENST00000486572 C10orf71Q711Q0 1435 aa23.71■■□□□ 1.39
COL1A1-207ENST00000486572 ERBB4Q15303 1308 aa23.71■■□□□ 1.39
COL1A1-207ENST00000486572 DCAF8L1A6NGE4 600 aa23.71■■□□□ 1.39
COL1A1-207ENST00000486572 GNAI1P63096 354 aa23.71■■□□□ 1.39
COL1A1-207ENST00000486572 DDR1Q08345 913 aa23.71■■□□□ 1.39
COL1A1-207ENST00000486572 MBIPQ9NS73 344 aa23.71■■□□□ 1.39
COL1A1-207ENST00000486572 TM4SF1P30408 202 aa23.7■■□□□ 1.38
COL1A1-207ENST00000486572 KIF13BQ9NQT8 1826 aa23.69■■□□□ 1.38
COL1A1-207ENST00000486572 POLRMTO00411 1230 aaKnown RBP23.69■■□□□ 1.38
COL1A1-207ENST00000486572 CAMTA2O94983 1202 aa23.69■■□□□ 1.38
COL1A1-207ENST00000486572 NFIXQ14938 502 aa23.69■■□□□ 1.38
COL1A1-207ENST00000486572 WWC1Q8IX03 1113 aa23.69■■□□□ 1.38
COL1A1-207ENST00000486572 KRT24Q2M2I5 525 aa23.68■■□□□ 1.38
COL1A1-207ENST00000486572 CCER2I3L3R5 266 aa23.67■■□□□ 1.38
COL1A1-207ENST00000486572 EIF2S2P20042 333 aaKnown RBP23.67■■□□□ 1.38
COL1A1-207ENST00000486572 HOXB7P09629 217 aa23.66■■□□□ 1.38
COL1A1-207ENST00000486572 MYL6BP14649 208 aa23.66■■□□□ 1.38
COL1A1-207ENST00000486572 NRXN2Q9P2S2 1712 aa23.65■■□□□ 1.38
COL1A1-207ENST00000486572 RGL2O15211 777 aa23.65■■□□□ 1.38
COL1A1-207ENST00000486572 TBC1D9BQ66K14 1250 aa23.65■■□□□ 1.38
COL1A1-207ENST00000486572 DIEXFQ68CQ4 756 aaKnown RBP23.65■■□□□ 1.38
COL1A1-207ENST00000486572 BICDL1Q6ZP65 573 aa23.65■■□□□ 1.38
COL1A1-207ENST00000486572 ZNF652Q9Y2D9 606 aa23.65■■□□□ 1.38
COL1A1-207ENST00000486572 NGEFQ8N5V2 710 aa23.64■■□□□ 1.37
COL1A1-207ENST00000486572 CARMIL3Q8ND23 1372 aa23.64■■□□□ 1.37
COL1A1-207ENST00000486572 IL16Q14005 1332 aa23.63■■□□□ 1.37
COL1A1-207ENST00000486572 PXDNLA1KZ92 1463 aa23.63■■□□□ 1.37
COL1A1-207ENST00000486572 CLEC4GQ6UXB4 293 aa23.63■■□□□ 1.37
COL1A1-207ENST00000486572 KIAA1551Q9HCM1 1747 aa23.63■■□□□ 1.37
COL1A1-207ENST00000486572 SALL2Q9Y467 1007 aaPredicted RBP23.63■■□□□ 1.37
COL1A1-207ENST00000486572 AFDNP55196 1824 aaKnown RBP23.63■■□□□ 1.37
COL1A1-207ENST00000486572 SERPINB2P05120 415 aa23.62■■□□□ 1.37
COL1A1-207ENST00000486572 PDIA6Q15084 440 aa23.62■■□□□ 1.37
COL1A1-207ENST00000486572 HDGFL1Q5TGJ6 251 aa23.62■■□□□ 1.37
COL1A1-207ENST00000486572 DUSP27Q5VZP5 1158 aa23.62■■□□□ 1.37
COL1A1-207ENST00000486572 NECTIN2Q92692 538 aa23.62■■□□□ 1.37
COL1A1-207ENST00000486572 TGFB2P61812 414 aa23.61■■□□□ 1.37
COL1A1-207ENST00000486572 GPR162Q16538 588 aa23.61■■□□□ 1.37
COL1A1-207ENST00000486572 KIF6Q6ZMV9 814 aa23.61■■□□□ 1.37
COL1A1-207ENST00000486572 PELP1Q8IZL8 1130 aaKnown RBP23.61■■□□□ 1.37
COL1A1-207ENST00000486572 PROSER3Q2NL68 480 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms