RNA–Protein interactions for RNA: ENST00000486440.5

PCOLCE-207, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 765 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-207ENST00000486440 SNRPA1P09661 255 aaKnown RBP24.27■■□□□ 1.48
PCOLCE-207ENST00000486440 CRKLP46109 303 aaKnown RBP24.27■■□□□ 1.48
PCOLCE-207ENST00000486440 PDGFDQ9GZP0 370 aaPredicted RBP24.27■■□□□ 1.48
PCOLCE-207ENST00000486440 TSR2Q969E8 191 aaKnown RBP24.26■■□□□ 1.47
PCOLCE-207ENST00000486440 C4AP0C0L4 1744 aa24.26■■□□□ 1.47
PCOLCE-207ENST00000486440 TEX13AQ9BXU3 409 aaPredicted RBP24.25■■□□□ 1.47
PCOLCE-207ENST00000486440 PNPLA7Q6ZV29 1317 aa24.24■■□□□ 1.47
PCOLCE-207ENST00000486440 HMGB2P26583 209 aaKnown RBP24.23■■□□□ 1.47
PCOLCE-207ENST00000486440 CCDC87Q9NVE4 849 aa24.23■■□□□ 1.47
PCOLCE-207ENST00000486440 TFCP2L1Q9NZI6 479 aa24.23■■□□□ 1.47
PCOLCE-207ENST00000486440 GNPATO15228 680 aa24.22■■□□□ 1.47
PCOLCE-207ENST00000486440 RPS6KA4O75676 772 aa24.22■■□□□ 1.47
PCOLCE-207ENST00000486440 STARD3NLO95772 234 aa24.22■■□□□ 1.47
PCOLCE-207ENST00000486440 A1BGP04217 495 aa24.22■■□□□ 1.47
PCOLCE-207ENST00000486440 C8orf58Q8NAV2 365 aa24.22■■□□□ 1.47
PCOLCE-207ENST00000486440 AK7Q96M32 723 aa24.22■■□□□ 1.47
PCOLCE-207ENST00000486440 HNRNPUQ00839 825 aaKnown RBP eCLIP24.21■■□□□ 1.47
PCOLCE-207ENST00000486440 COL23A1Q86Y22 540 aaPredicted RBP24.21■■□□□ 1.47
PCOLCE-207ENST00000486440 ZBTB1Q9Y2K1 713 aa24.21■■□□□ 1.47
PCOLCE-207ENST00000486440 COL24A1Q17RW2 1714 aa24.21■■□□□ 1.47
PCOLCE-207ENST00000486440 FANCIQ9NVI1 1328 aa24.2■■□□□ 1.46
PCOLCE-207ENST00000486440 CDCA7LQ96GN5 454 aa24.2■■□□□ 1.46
PCOLCE-207ENST00000486440 NBPF26B4DH59 902 aa24.19■■□□□ 1.46
PCOLCE-207ENST00000486440 NBPF10Q6P3W6 841 aaKnown RBP24.19■■□□□ 1.46
PCOLCE-207ENST00000486440 NBPF15Q8N660 670 aa24.19■■□□□ 1.46
PCOLCE-207ENST00000486440 TSPYL6Q8N831 410 aa24.19■■□□□ 1.46
PCOLCE-207ENST00000486440 SOS1Q07889 1333 aaPredicted RBP24.18■■□□□ 1.46
PCOLCE-207ENST00000486440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.18■■□□□ 1.46
PCOLCE-207ENST00000486440 PIP4K2AP48426 406 aaPredicted RBP24.18■■□□□ 1.46
PCOLCE-207ENST00000486440 GOLGA2Q08379 1002 aa24.18■■□□□ 1.46
PCOLCE-207ENST00000486440 SLFN5Q08AF3 891 aa24.18■■□□□ 1.46
PCOLCE-207ENST00000486440 DUSP27Q5VZP5 1158 aa24.18■■□□□ 1.46
PCOLCE-207ENST00000486440 CACNA1FO60840 1977 aa24.17■■□□□ 1.46
PCOLCE-207ENST00000486440 CANXP27824 592 aaKnown RBP24.17■■□□□ 1.46
PCOLCE-207ENST00000486440 SSFA2P28290 1259 aa24.17■■□□□ 1.46
PCOLCE-207ENST00000486440 TRMT2AQ8IZ69 625 aaKnown RBP24.17■■□□□ 1.46
PCOLCE-207ENST00000486440 RTCBQ9Y3I0 505 aaKnown RBP24.17■■□□□ 1.46
PCOLCE-207ENST00000486440 ELL2O00472 640 aaPredicted RBP24.16■■□□□ 1.46
PCOLCE-207ENST00000486440 EIF5P55010 431 aaKnown RBP24.16■■□□□ 1.46
PCOLCE-207ENST00000486440 ARHGEF1Q92888 912 aaKnown RBP24.16■■□□□ 1.46
PCOLCE-207ENST00000486440 PHF14O94880 888 aa24.15■■□□□ 1.46
PCOLCE-207ENST00000486440 HOXB7P09629 217 aa24.14■■□□□ 1.45
PCOLCE-207ENST00000486440 EIF2S2P20042 333 aaKnown RBP24.14■■□□□ 1.45
PCOLCE-207ENST00000486440 EXOSC9Q06265 439 aaKnown RBP24.14■■□□□ 1.45
PCOLCE-207ENST00000486440 PDIA6Q15084 440 aa24.14■■□□□ 1.45
PCOLCE-207ENST00000486440 IL6STP40189 918 aaPredicted RBP24.13■■□□□ 1.45
PCOLCE-207ENST00000486440 TRAPPC3LQ5T215 181 aa24.13■■□□□ 1.45
PCOLCE-207ENST00000486440 FLAD1Q8NFF5 587 aa24.13■■□□□ 1.45
PCOLCE-207ENST00000486440 MYH16Q9H6N6 1097 aa24.13■■□□□ 1.45
PCOLCE-207ENST00000486440 BCORQ6W2J9 1755 aa24.12■■□□□ 1.45
PCOLCE-207ENST00000486440 E9PSI1 815 aa24.12■■□□□ 1.45
PCOLCE-207ENST00000486440 ADRA2BP18089 450 aa24.12■■□□□ 1.45
PCOLCE-207ENST00000486440 LRP10Q7Z4F1 713 aa24.12■■□□□ 1.45
PCOLCE-207ENST00000486440 NECTIN2Q92692 538 aa24.12■■□□□ 1.45
PCOLCE-207ENST00000486440 NUP98P52948 1817 aa24.12■■□□□ 1.45
PCOLCE-207ENST00000486440 PROSER3Q2NL68 480 aa24.11■■□□□ 1.45
PCOLCE-207ENST00000486440 COL15A1P39059 1388 aa24.11■■□□□ 1.45
PCOLCE-207ENST00000486440 ZBED9Q6R2W3 1325 aa24.1■■□□□ 1.45
PCOLCE-207ENST00000486440 VAMP4O75379 141 aa24.09■■□□□ 1.45
PCOLCE-207ENST00000486440 ANXA1P04083 346 aa24.09■■□□□ 1.45
PCOLCE-207ENST00000486440 TWISTNBQ3B726 338 aaPredicted RBP24.09■■□□□ 1.45
PCOLCE-207ENST00000486440 ERBB4Q15303 1308 aa24.09■■□□□ 1.45
PCOLCE-207ENST00000486440 SCN7AQ01118 1682 aa24.08■■□□□ 1.45
PCOLCE-207ENST00000486440 MSH5O43196 834 aa24.08■■□□□ 1.45
PCOLCE-207ENST00000486440 ZBTB7AO95365 584 aa24.08■■□□□ 1.45
PCOLCE-207ENST00000486440 HDGFL1Q5TGJ6 251 aa24.08■■□□□ 1.45
PCOLCE-207ENST00000486440 SLC16A10Q8TF71 515 aa24.08■■□□□ 1.45
PCOLCE-207ENST00000486440 SRP68Q9UHB9 627 aaKnown RBP24.08■■□□□ 1.45
PCOLCE-207ENST00000486440 MYL6BP14649 208 aa24.07■■□□□ 1.44
PCOLCE-207ENST00000486440 RFC4P35249 363 aa24.07■■□□□ 1.44
PCOLCE-207ENST00000486440 CHPF2Q9P2E5 772 aa24.07■■□□□ 1.44
PCOLCE-207ENST00000486440 BCL2L12Q9HB09 334 aa24.06■■□□□ 1.44
PCOLCE-207ENST00000486440 DDX21Q9NR30 783 aaKnown RBP eCLIP24.06■■□□□ 1.44
PCOLCE-207ENST00000486440 NARFQ9UHQ1 456 aa24.06■■□□□ 1.44
PCOLCE-207ENST00000486440 TBC1D2BQ9UPU7 963 aa24.06■■□□□ 1.44
PCOLCE-207ENST00000486440 USP42Q9H9J4 1324 aaKnown RBP24.06■■□□□ 1.44
PCOLCE-207ENST00000486440 ATF5Q9Y2D1 282 aaPredicted RBP24.05■■□□□ 1.44
PCOLCE-207ENST00000486440 ZNF330Q9Y3S2 320 aaPredicted RBP24.05■■□□□ 1.44
PCOLCE-207ENST00000486440 SRCAPQ6ZRS2 3230 aa24.05■■□□□ 1.44
PCOLCE-207ENST00000486440 GYS1P13807 737 aa24.04■■□□□ 1.44
PCOLCE-207ENST00000486440 SGIP1Q9BQI5 828 aa24.04■■□□□ 1.44
PCOLCE-207ENST00000486440 MTFR1LQ9H019 292 aa24.04■■□□□ 1.44
PCOLCE-207ENST00000486440 A0A087WZG4 1122 aa24.03■■□□□ 1.44
PCOLCE-207ENST00000486440 USPL1Q5W0Q7 1092 aa24.03■■□□□ 1.44
PCOLCE-207ENST00000486440 TTLL7Q6ZT98 887 aa24.03■■□□□ 1.44
PCOLCE-207ENST00000486440 DBF4Q9UBU7 674 aaPredicted RBP24.03■■□□□ 1.44
PCOLCE-207ENST00000486440 TCERG1O14776 1098 aaKnown RBP24.02■■□□□ 1.44
PCOLCE-207ENST00000486440 CAMTA2O94983 1202 aa24.02■■□□□ 1.44
PCOLCE-207ENST00000486440 PTGER2P43116 358 aa24.02■■□□□ 1.44
PCOLCE-207ENST00000486440 MSL1Q68DK7 614 aa24.02■■□□□ 1.44
PCOLCE-207ENST00000486440 AFDNP55196 1824 aaKnown RBP24.02■■□□□ 1.44
PCOLCE-207ENST00000486440 LRP5O75197 1615 aa24.02■■□□□ 1.44
PCOLCE-207ENST00000486440 FKBP8Q14318 412 aa24.01■■□□□ 1.43
PCOLCE-207ENST00000486440 CCDC30Q5VVM6 783 aa24.01■■□□□ 1.43
PCOLCE-207ENST00000486440 DZIP3Q86Y13 1208 aaKnown RBP24.01■■□□□ 1.43
PCOLCE-207ENST00000486440 ANKRD36CQ5JPF3 1778 aa24■■□□□ 1.43
PCOLCE-207ENST00000486440 ARFGEF2Q9Y6D5 1785 aa23.99■■□□□ 1.43
PCOLCE-207ENST00000486440 ZPR1O75312 459 aa23.99■■□□□ 1.43
PCOLCE-207ENST00000486440 COPS6Q7L5N1 327 aa23.99■■□□□ 1.43
PCOLCE-207ENST00000486440 XAGE3Q8WTP9 111 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms