RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 USP42Q9H9J4 1324 aaKnown RBP22.07■■□□□ 1.12
CCHCR1-214ENST00000486060 MMP10P09238 476 aa22.07■■□□□ 1.12
CCHCR1-214ENST00000486060 PRAMEF22A3QJZ6 481 aa22.06■■□□□ 1.12
CCHCR1-214ENST00000486060 FMNL2Q96PY5 1086 aa22.06■■□□□ 1.12
CCHCR1-214ENST00000486060 BRCA1P38398 1863 aaKnown RBP22.06■■□□□ 1.12
CCHCR1-214ENST00000486060 SCN7AQ01118 1682 aa22.05■■□□□ 1.12
CCHCR1-214ENST00000486060 COL15A1P39059 1388 aa22.05■■□□□ 1.12
CCHCR1-214ENST00000486060 FKBP8Q14318 412 aa22.05■■□□□ 1.12
CCHCR1-214ENST00000486060 MIS18AQ9NYP9 233 aa22.05■■□□□ 1.12
CCHCR1-214ENST00000486060 MAPK8IP3Q9UPT6 1336 aa22.05■■□□□ 1.12
CCHCR1-214ENST00000486060 BCORQ6W2J9 1755 aa22.04■■□□□ 1.12
CCHCR1-214ENST00000486060 NEFMP07197 916 aa22.04■■□□□ 1.12
CCHCR1-214ENST00000486060 CCDC146Q8IYE0 955 aa22.04■■□□□ 1.12
CCHCR1-214ENST00000486060 NLGN1Q8N2Q7 840 aa22.04■■□□□ 1.12
CCHCR1-214ENST00000486060 PNNQ9H307 717 aaKnown RBP22.04■■□□□ 1.12
CCHCR1-214ENST00000486060 CD2APQ9Y5K6 639 aa22.04■■□□□ 1.12
CCHCR1-214ENST00000486060 NRXN2Q9P2S2 1712 aa22.03■■□□□ 1.12
CCHCR1-214ENST00000486060 CANXP27824 592 aaKnown RBP22.03■■□□□ 1.12
CCHCR1-214ENST00000486060 TAF7Q15545 349 aaPredicted RBP22.03■■□□□ 1.12
CCHCR1-214ENST00000486060 ADAMTS8Q9UP79 889 aa22.03■■□□□ 1.12
CCHCR1-214ENST00000486060 USP16Q9Y5T5 823 aa22.03■■□□□ 1.12
CCHCR1-214ENST00000486060 A1BGP04217 495 aa22.02■■□□□ 1.12
CCHCR1-214ENST00000486060 TMPOP42166 694 aaKnown RBP22.02■■□□□ 1.12
CCHCR1-214ENST00000486060 EIF5P55010 431 aaKnown RBP22.02■■□□□ 1.12
CCHCR1-214ENST00000486060 CCDC184Q52MB2 194 aa22.02■■□□□ 1.12
CCHCR1-214ENST00000486060 BCL2L12Q9HB09 334 aa22.02■■□□□ 1.12
CCHCR1-214ENST00000486060 STARD3NLO95772 234 aa22.01■■□□□ 1.11
CCHCR1-214ENST00000486060 DDR1Q08345 913 aa22.01■■□□□ 1.11
CCHCR1-214ENST00000486060 USPL1Q5W0Q7 1092 aa22.01■■□□□ 1.11
CCHCR1-214ENST00000486060 C10orf71Q711Q0 1435 aa22■■□□□ 1.11
CCHCR1-214ENST00000486060 YBX3P16989 372 aaKnown RBP eCLIP22■■□□□ 1.11
CCHCR1-214ENST00000486060 TEX13AQ9BXU3 409 aaPredicted RBP22■■□□□ 1.11
CCHCR1-214ENST00000486060 NARFQ9UHQ1 456 aa22■■□□□ 1.11
CCHCR1-214ENST00000486060 RRP7AQ9Y3A4 280 aaKnown RBP22■■□□□ 1.11
CCHCR1-214ENST00000486060 DCAF8L1A6NGE4 600 aa21.99■■□□□ 1.11
CCHCR1-214ENST00000486060 TM4SF1P30408 202 aa21.99■■□□□ 1.11
CCHCR1-214ENST00000486060 RIPK4P57078 832 aa21.99■■□□□ 1.11
CCHCR1-214ENST00000486060 PIP4K2AP48426 406 aaPredicted RBP21.98■■□□□ 1.11
CCHCR1-214ENST00000486060 WDR43Q15061 677 aaKnown RBP eCLIP21.98■■□□□ 1.11
CCHCR1-214ENST00000486060 PXDNLA1KZ92 1463 aa21.97■■□□□ 1.11
CCHCR1-214ENST00000486060 SNRPA1P09661 255 aaKnown RBP21.97■■□□□ 1.11
CCHCR1-214ENST00000486060 GPR162Q16538 588 aa21.97■■□□□ 1.11
CCHCR1-214ENST00000486060 RUNDC1Q96C34 613 aa21.97■■□□□ 1.11
CCHCR1-214ENST00000486060 ZPR1O75312 459 aa21.96■■□□□ 1.11
CCHCR1-214ENST00000486060 PELP1Q8IZL8 1130 aaKnown RBP21.96■■□□□ 1.11
CCHCR1-214ENST00000486060 ANKRD31Q8N7Z5 1873 aa21.96■■□□□ 1.11
CCHCR1-214ENST00000486060 POLRMTO00411 1230 aaKnown RBP21.95■■□□□ 1.1
CCHCR1-214ENST00000486060 IL6STP40189 918 aaPredicted RBP21.95■■□□□ 1.1
CCHCR1-214ENST00000486060 EIF4A1P60842 406 aaKnown RBP21.95■■□□□ 1.1
CCHCR1-214ENST00000486060 TRIM35Q9UPQ4 493 aa21.95■■□□□ 1.1
CCHCR1-214ENST00000486060 PARP3Q9Y6F1 533 aa21.95■■□□□ 1.1
CCHCR1-214ENST00000486060 NBPF26B4DH59 902 aa21.94■■□□□ 1.1
CCHCR1-214ENST00000486060 NFIXQ14938 502 aa21.94■■□□□ 1.1
CCHCR1-214ENST00000486060 NEUROD2Q15784 382 aa21.94■■□□□ 1.1
CCHCR1-214ENST00000486060 NBPF10Q6P3W6 841 aaKnown RBP21.94■■□□□ 1.1
CCHCR1-214ENST00000486060 NBPF15Q8N660 670 aa21.94■■□□□ 1.1
CCHCR1-214ENST00000486060 WWC3Q9ULE0 1092 aa21.94■■□□□ 1.1
CCHCR1-214ENST00000486060 TBC1D2BQ9UPU7 963 aa21.94■■□□□ 1.1
CCHCR1-214ENST00000486060 YY1P25490 414 aa21.93■■□□□ 1.1
CCHCR1-214ENST00000486060 NUP98P52948 1817 aa21.93■■□□□ 1.1
CCHCR1-214ENST00000486060 PNISRQ8TF01 805 aaKnown RBP21.93■■□□□ 1.1
CCHCR1-214ENST00000486060 DLEC1Q9Y238 1755 aa21.93■■□□□ 1.1
CCHCR1-214ENST00000486060 ARFGEF1Q9Y6D6 1849 aa21.92■■□□□ 1.1
CCHCR1-214ENST00000486060 GIGYF1O75420 1035 aaPredicted RBP21.92■■□□□ 1.1
CCHCR1-214ENST00000486060 ZNF330Q9Y3S2 320 aaPredicted RBP21.92■■□□□ 1.1
CCHCR1-214ENST00000486060 A0A087WZG4 1122 aa21.9■■□□□ 1.1
CCHCR1-214ENST00000486060 A0A0G2JLW4 131 aa21.9■■□□□ 1.1
CCHCR1-214ENST00000486060 CAMTA2O94983 1202 aa21.9■■□□□ 1.1
CCHCR1-214ENST00000486060 KCNA3P22001 575 aa21.89■■□□□ 1.09
CCHCR1-214ENST00000486060 TBC1D9BQ66K14 1250 aa21.89■■□□□ 1.09
CCHCR1-214ENST00000486060 TSPYL4Q9UJ04 414 aa21.89■■□□□ 1.09
CCHCR1-214ENST00000486060 DPEP1P16444 411 aa21.88■■□□□ 1.09
CCHCR1-214ENST00000486060 TGFB2P61812 414 aa21.88■■□□□ 1.09
CCHCR1-214ENST00000486060 LMOD3Q0VAK6 560 aa21.88■■□□□ 1.09
CCHCR1-214ENST00000486060 CARMIL3Q8ND23 1372 aa21.87■■□□□ 1.09
CCHCR1-214ENST00000486060 COL11A2P13942 1736 aaPredicted RBP21.87■■□□□ 1.09
CCHCR1-214ENST00000486060 APAF1O14727 1248 aa21.87■■□□□ 1.09
CCHCR1-214ENST00000486060 DZIP3Q86Y13 1208 aaKnown RBP21.87■■□□□ 1.09
CCHCR1-214ENST00000486060 SERPINB2P05120 415 aa21.86■■□□□ 1.09
CCHCR1-214ENST00000486060 BICDL1Q6ZP65 573 aa21.86■■□□□ 1.09
CCHCR1-214ENST00000486060 CHL1O00533 1208 aa21.85■■□□□ 1.09
CCHCR1-214ENST00000486060 BABAM1Q9NWV8 329 aa21.85■■□□□ 1.09
CCHCR1-214ENST00000486060 CACNA1SQ13698 1873 aa21.85■■□□□ 1.09
CCHCR1-214ENST00000486060 KRT24Q2M2I5 525 aa21.84■■□□□ 1.09
CCHCR1-214ENST00000486060 GRIN3BO60391 1043 aa21.83■■□□□ 1.09
CCHCR1-214ENST00000486060 CHRNA5P30532 468 aa21.83■■□□□ 1.09
CCHCR1-214ENST00000486060 ANP32CO43423 234 aa21.82■■□□□ 1.08
CCHCR1-214ENST00000486060 SBF1O95248 1867 aa21.81■■□□□ 1.08
CCHCR1-214ENST00000486060 LRP10Q7Z4F1 713 aa21.81■■□□□ 1.08
CCHCR1-214ENST00000486060 SENP3-EIF4A1A0A087X0R7 540 aa21.8■■□□□ 1.08
CCHCR1-214ENST00000486060 PDIA6Q15084 440 aa21.8■■□□□ 1.08
CCHCR1-214ENST00000486060 HLFQ16534 295 aa21.8■■□□□ 1.08
CCHCR1-214ENST00000486060 CCDC24Q8N4L8 307 aa21.8■■□□□ 1.08
CCHCR1-214ENST00000486060 LAS1LQ9Y4W2 734 aaKnown RBP21.8■■□□□ 1.08
CCHCR1-214ENST00000486060 TTLL7Q6ZT98 887 aa21.79■■□□□ 1.08
CCHCR1-214ENST00000486060 NGEFQ8N5V2 710 aa21.79■■□□□ 1.08
CCHCR1-214ENST00000486060 MRS2Q9HD23 443 aa21.79■■□□□ 1.08
CCHCR1-214ENST00000486060 BCS1LQ9Y276 419 aa21.79■■□□□ 1.08
CCHCR1-214ENST00000486060 CCDC88AQ3V6T2 1871 aa21.79■■□□□ 1.08
CCHCR1-214ENST00000486060 ANKRD36CQ5JPF3 1778 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms