RNA–Protein interactions for RNA: ENST00000486018.1

TPM2-206, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 699 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-206ENST00000486018 TSR2Q969E8 191 aaKnown RBP20.39■□□□□ 0.85
TPM2-206ENST00000486018 CDCA7LQ96GN5 454 aa20.39■□□□□ 0.85
TPM2-206ENST00000486018 ARXQ96QS3 562 aa20.39■□□□□ 0.85
TPM2-206ENST00000486018 E9PSI1 815 aa20.38■□□□□ 0.85
TPM2-206ENST00000486018 TAF1LQ8IZX4 1826 aa20.38■□□□□ 0.85
TPM2-206ENST00000486018 COL5A3P25940 1745 aaPredicted RBP20.38■□□□□ 0.85
TPM2-206ENST00000486018 C5P01031 1676 aa20.38■□□□□ 0.85
TPM2-206ENST00000486018 UTRNP46939 3433 aa20.37■□□□□ 0.85
TPM2-206ENST00000486018 PRAMEF22A3QJZ6 481 aa20.37■□□□□ 0.85
TPM2-206ENST00000486018 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
TPM2-206ENST00000486018 KRT24Q2M2I5 525 aa20.37■□□□□ 0.85
TPM2-206ENST00000486018 DNAJC10Q8IXB1 793 aa20.37■□□□□ 0.85
TPM2-206ENST00000486018 LINC00116Q8NCU8 138 aa20.37■□□□□ 0.85
TPM2-206ENST00000486018 MYH16Q9H6N6 1097 aa20.36■□□□□ 0.85
TPM2-206ENST00000486018 PNPLA7Q6ZV29 1317 aa20.35■□□□□ 0.85
TPM2-206ENST00000486018 CYP19A1P11511 503 aaPredicted RBP20.35■□□□□ 0.85
TPM2-206ENST00000486018 DUSP27Q5VZP5 1158 aa20.35■□□□□ 0.85
TPM2-206ENST00000486018 C8orf58Q8NAV2 365 aa20.35■□□□□ 0.85
TPM2-206ENST00000486018 TEX13AQ9BXU3 409 aaPredicted RBP20.35■□□□□ 0.85
TPM2-206ENST00000486018 HOXB7P09629 217 aa20.34■□□□□ 0.85
TPM2-206ENST00000486018 USP16Q9Y5T5 823 aa20.34■□□□□ 0.85
TPM2-206ENST00000486018 C4BP0C0L5 1744 aa20.33■□□□□ 0.85
TPM2-206ENST00000486018 CNTNAP4Q9C0A0 1308 aa20.33■□□□□ 0.85
TPM2-206ENST00000486018 HMGB2P26583 209 aaKnown RBP20.33■□□□□ 0.85
TPM2-206ENST00000486018 RC3H1Q5TC82 1133 aaKnown RBP20.33■□□□□ 0.85
TPM2-206ENST00000486018 TFCP2L1Q9NZI6 479 aa20.33■□□□□ 0.85
TPM2-206ENST00000486018 CHD4Q14839 1912 aa20.33■□□□□ 0.84
TPM2-206ENST00000486018 SOS1Q07889 1333 aaPredicted RBP20.32■□□□□ 0.84
TPM2-206ENST00000486018 MYH14Q7Z406 1995 aaKnown RBP20.32■□□□□ 0.84
TPM2-206ENST00000486018 LAMB4A4D0S4 1761 aa20.32■□□□□ 0.84
TPM2-206ENST00000486018 INTS5Q6P9B9 1019 aaKnown RBP20.32■□□□□ 0.84
TPM2-206ENST00000486018 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
TPM2-206ENST00000486018 QSER1Q2KHR3 1735 aa20.31■□□□□ 0.84
TPM2-206ENST00000486018 EXOSC9Q06265 439 aaKnown RBP20.31■□□□□ 0.84
TPM2-206ENST00000486018 CRKLP46109 303 aaKnown RBP20.3■□□□□ 0.84
TPM2-206ENST00000486018 KLHL34Q8N239 644 aa20.3■□□□□ 0.84
TPM2-206ENST00000486018 SLC16A10Q8TF71 515 aa20.3■□□□□ 0.84
TPM2-206ENST00000486018 STARD3NLO95772 234 aa20.29■□□□□ 0.84
TPM2-206ENST00000486018 TUBGCP6Q96RT7 1819 aa20.28■□□□□ 0.84
TPM2-206ENST00000486018 VAMP4O75379 141 aa20.28■□□□□ 0.84
TPM2-206ENST00000486018 AMIGO3Q86WK7 504 aa20.28■□□□□ 0.84
TPM2-206ENST00000486018 ZNF784Q8NCA9 323 aaPredicted RBP20.28■□□□□ 0.84
TPM2-206ENST00000486018 CCDC87Q9NVE4 849 aa20.28■□□□□ 0.84
TPM2-206ENST00000486018 NBPF26B4DH59 902 aa20.27■□□□□ 0.84
TPM2-206ENST00000486018 TWISTNBQ3B726 338 aaPredicted RBP20.27■□□□□ 0.84
TPM2-206ENST00000486018 NBPF10Q6P3W6 841 aaKnown RBP20.27■□□□□ 0.84
TPM2-206ENST00000486018 COL23A1Q86Y22 540 aaPredicted RBP20.27■□□□□ 0.84
TPM2-206ENST00000486018 NBPF15Q8N660 670 aa20.27■□□□□ 0.84
TPM2-206ENST00000486018 ZBTB1Q9Y2K1 713 aa20.27■□□□□ 0.84
TPM2-206ENST00000486018 ERBB4Q15303 1308 aa20.27■□□□□ 0.83
TPM2-206ENST00000486018 ELL2O00472 640 aaPredicted RBP20.26■□□□□ 0.83
TPM2-206ENST00000486018 A1BGP04217 495 aa20.26■□□□□ 0.83
TPM2-206ENST00000486018 PDIA6Q15084 440 aa20.26■□□□□ 0.83
TPM2-206ENST00000486018 LRP10Q7Z4F1 713 aa20.26■□□□□ 0.83
TPM2-206ENST00000486018 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
TPM2-206ENST00000486018 UBR3Q6ZT12 1888 aa20.26■□□□□ 0.83
TPM2-206ENST00000486018 COL24A1Q17RW2 1714 aa20.25■□□□□ 0.83
TPM2-206ENST00000486018 MSH5O43196 834 aa20.25■□□□□ 0.83
TPM2-206ENST00000486018 RPS6KA4O75676 772 aa20.25■□□□□ 0.83
TPM2-206ENST00000486018 POLD1P28340 1107 aa20.25■□□□□ 0.83
TPM2-206ENST00000486018 EIF5P55010 431 aaKnown RBP20.24■□□□□ 0.83
TPM2-206ENST00000486018 GPR162Q16538 588 aa20.24■□□□□ 0.83
TPM2-206ENST00000486018 NLGN2Q8NFZ4 835 aa20.24■□□□□ 0.83
TPM2-206ENST00000486018 GNPATO15228 680 aa20.23■□□□□ 0.83
TPM2-206ENST00000486018 CT47B1P0C2W7 299 aaPredicted RBP20.23■□□□□ 0.83
TPM2-206ENST00000486018 EIF2S2P20042 333 aaKnown RBP20.23■□□□□ 0.83
TPM2-206ENST00000486018 HDGFL1Q5TGJ6 251 aa20.23■□□□□ 0.83
TPM2-206ENST00000486018 IL6STP40189 918 aaPredicted RBP20.22■□□□□ 0.83
TPM2-206ENST00000486018 MSL1Q68DK7 614 aa20.22■□□□□ 0.83
TPM2-206ENST00000486018 PELP1Q8IZL8 1130 aaKnown RBP20.22■□□□□ 0.83
TPM2-206ENST00000486018 AK7Q96M32 723 aa20.22■□□□□ 0.83
TPM2-206ENST00000486018 SSFA2P28290 1259 aa20.21■□□□□ 0.83
TPM2-206ENST00000486018 PROSER3Q2NL68 480 aa20.21■□□□□ 0.83
TPM2-206ENST00000486018 CHMP4AQ9BY43 222 aa20.21■□□□□ 0.83
TPM2-206ENST00000486018 ADRA2BP18089 450 aa20.2■□□□□ 0.82
TPM2-206ENST00000486018 CANXP27824 592 aaKnown RBP20.2■□□□□ 0.82
TPM2-206ENST00000486018 PIP4K2AP48426 406 aaPredicted RBP20.2■□□□□ 0.82
TPM2-206ENST00000486018 SMIM5Q71RC9 77 aa20.2■□□□□ 0.82
TPM2-206ENST00000486018 ZNF428Q96B54 188 aa20.2■□□□□ 0.82
TPM2-206ENST00000486018 DDX21Q9NR30 783 aaKnown RBP eCLIP20.2■□□□□ 0.82
TPM2-206ENST00000486018 CHPF2Q9P2E5 772 aa20.2■□□□□ 0.82
TPM2-206ENST00000486018 RTCBQ9Y3I0 505 aaKnown RBP20.2■□□□□ 0.82
TPM2-206ENST00000486018 CCDC30Q5VVM6 783 aa20.19■□□□□ 0.82
TPM2-206ENST00000486018 NECTIN2Q92692 538 aa20.19■□□□□ 0.82
TPM2-206ENST00000486018 DBF4Q9UBU7 674 aaPredicted RBP20.19■□□□□ 0.82
TPM2-206ENST00000486018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
TPM2-206ENST00000486018 ARHGEF1Q92888 912 aaKnown RBP20.18■□□□□ 0.82
TPM2-206ENST00000486018 ANXA1P04083 346 aa20.17■□□□□ 0.82
TPM2-206ENST00000486018 TRAPPC3LQ5T215 181 aa20.17■□□□□ 0.82
TPM2-206ENST00000486018 FLAD1Q8NFF5 587 aa20.17■□□□□ 0.82
TPM2-206ENST00000486018 COL15A1P39059 1388 aa20.17■□□□□ 0.82
TPM2-206ENST00000486018 HYPKQ9NX55 129 aa20.16■□□□□ 0.82
TPM2-206ENST00000486018 C4AP0C0L4 1744 aa20.16■□□□□ 0.82
TPM2-206ENST00000486018 SSH1Q8WYL5 1049 aa20.15■□□□□ 0.82
TPM2-206ENST00000486018 MYL6BP14649 208 aa20.14■□□□□ 0.81
TPM2-206ENST00000486018 YBX3P16989 372 aaKnown RBP eCLIP20.14■□□□□ 0.81
TPM2-206ENST00000486018 ALDH1L2Q3SY69 923 aa20.14■□□□□ 0.81
TPM2-206ENST00000486018 GOLGB1Q14789 3259 aaKnown RBP20.14■□□□□ 0.81
TPM2-206ENST00000486018 A0A087WZG4 1122 aa20.13■□□□□ 0.81
TPM2-206ENST00000486018 TCERG1O14776 1098 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms