RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 INTS5Q6P9B9 1019 aaKnown RBP20.13■□□□□ 0.81
RPUSD3-217ENST00000485705 CDCA7LQ96GN5 454 aa20.13■□□□□ 0.81
RPUSD3-217ENST00000485705 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
RPUSD3-217ENST00000485705 CNTNAP4Q9C0A0 1308 aa20.12■□□□□ 0.81
RPUSD3-217ENST00000485705 GOLGA2Q08379 1002 aa20.12■□□□□ 0.81
RPUSD3-217ENST00000485705 RC3H1Q5TC82 1133 aaKnown RBP20.12■□□□□ 0.81
RPUSD3-217ENST00000485705 AK7Q96M32 723 aa20.12■□□□□ 0.81
RPUSD3-217ENST00000485705 GNPATO15228 680 aa20.11■□□□□ 0.81
RPUSD3-217ENST00000485705 STARD3NLO95772 234 aa20.11■□□□□ 0.81
RPUSD3-217ENST00000485705 A1BGP04217 495 aa20.11■□□□□ 0.81
RPUSD3-217ENST00000485705 C8orf58Q8NAV2 365 aa20.11■□□□□ 0.81
RPUSD3-217ENST00000485705 TEX13AQ9BXU3 409 aaPredicted RBP20.11■□□□□ 0.81
RPUSD3-217ENST00000485705 TFCP2L1Q9NZI6 479 aa20.11■□□□□ 0.81
RPUSD3-217ENST00000485705 ZBTB1Q9Y2K1 713 aa20.11■□□□□ 0.81
RPUSD3-217ENST00000485705 ELL2O00472 640 aaPredicted RBP20.1■□□□□ 0.81
RPUSD3-217ENST00000485705 PIP4K2AP48426 406 aaPredicted RBP20.1■□□□□ 0.81
RPUSD3-217ENST00000485705 DUSP27Q5VZP5 1158 aa20.1■□□□□ 0.81
RPUSD3-217ENST00000485705 PDGFDQ9GZP0 370 aaPredicted RBP20.1■□□□□ 0.81
RPUSD3-217ENST00000485705 CCDC87Q9NVE4 849 aa20.1■□□□□ 0.81
RPUSD3-217ENST00000485705 QSER1Q2KHR3 1735 aa20.1■□□□□ 0.81
RPUSD3-217ENST00000485705 SLFN5Q08AF3 891 aa20.09■□□□□ 0.81
RPUSD3-217ENST00000485705 TSPYL6Q8N831 410 aa20.09■□□□□ 0.81
RPUSD3-217ENST00000485705 PNPLA7Q6ZV29 1317 aa20.08■□□□□ 0.81
RPUSD3-217ENST00000485705 RPS6KA4O75676 772 aa20.08■□□□□ 0.81
RPUSD3-217ENST00000485705 PHF14O94880 888 aa20.08■□□□□ 0.81
RPUSD3-217ENST00000485705 EIF2S2P20042 333 aaKnown RBP20.08■□□□□ 0.81
RPUSD3-217ENST00000485705 HMGB2P26583 209 aaKnown RBP20.08■□□□□ 0.81
RPUSD3-217ENST00000485705 CANXP27824 592 aaKnown RBP20.08■□□□□ 0.81
RPUSD3-217ENST00000485705 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
RPUSD3-217ENST00000485705 MYH16Q9H6N6 1097 aa20.08■□□□□ 0.81
RPUSD3-217ENST00000485705 E9PSI1 815 aa20.07■□□□□ 0.8
RPUSD3-217ENST00000485705 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
RPUSD3-217ENST00000485705 COL23A1Q86Y22 540 aaPredicted RBP20.07■□□□□ 0.8
RPUSD3-217ENST00000485705 RTCBQ9Y3I0 505 aaKnown RBP20.07■□□□□ 0.8
RPUSD3-217ENST00000485705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.06■□□□□ 0.8
RPUSD3-217ENST00000485705 NBPF26B4DH59 902 aa20.06■□□□□ 0.8
RPUSD3-217ENST00000485705 NBPF10Q6P3W6 841 aaKnown RBP20.06■□□□□ 0.8
RPUSD3-217ENST00000485705 NBPF15Q8N660 670 aa20.06■□□□□ 0.8
RPUSD3-217ENST00000485705 SOS1Q07889 1333 aaPredicted RBP20.05■□□□□ 0.8
RPUSD3-217ENST00000485705 ZBED9Q6R2W3 1325 aa20.05■□□□□ 0.8
RPUSD3-217ENST00000485705 CASZ1Q86V15 1759 aa20.05■□□□□ 0.8
RPUSD3-217ENST00000485705 SSFA2P28290 1259 aa20.04■□□□□ 0.8
RPUSD3-217ENST00000485705 TRMT2AQ8IZ69 625 aaKnown RBP20.04■□□□□ 0.8
RPUSD3-217ENST00000485705 C4AP0C0L4 1744 aa20.04■□□□□ 0.8
RPUSD3-217ENST00000485705 ANXA1P04083 346 aa20.03■□□□□ 0.8
RPUSD3-217ENST00000485705 HOXB7P09629 217 aa20.03■□□□□ 0.8
RPUSD3-217ENST00000485705 EIF5P55010 431 aaKnown RBP20.03■□□□□ 0.8
RPUSD3-217ENST00000485705 HDGFL1Q5TGJ6 251 aa20.03■□□□□ 0.8
RPUSD3-217ENST00000485705 ARHGEF1Q92888 912 aaKnown RBP20.03■□□□□ 0.8
RPUSD3-217ENST00000485705 MSH5O43196 834 aa20.02■□□□□ 0.8
RPUSD3-217ENST00000485705 PDIA6Q15084 440 aa20.02■□□□□ 0.8
RPUSD3-217ENST00000485705 PROSER3Q2NL68 480 aa20.02■□□□□ 0.8
RPUSD3-217ENST00000485705 TWISTNBQ3B726 338 aaPredicted RBP20.02■□□□□ 0.8
RPUSD3-217ENST00000485705 TRAPPC3LQ5T215 181 aa20.02■□□□□ 0.8
RPUSD3-217ENST00000485705 YTHDC1Q96MU7 727 aaKnown RBP20.02■□□□□ 0.8
RPUSD3-217ENST00000485705 ZNF330Q9Y3S2 320 aaPredicted RBP20.02■□□□□ 0.8
RPUSD3-217ENST00000485705 COL15A1P39059 1388 aa20.01■□□□□ 0.79
RPUSD3-217ENST00000485705 MYL6BP14649 208 aa20.01■□□□□ 0.79
RPUSD3-217ENST00000485705 IL6STP40189 918 aaPredicted RBP20.01■□□□□ 0.79
RPUSD3-217ENST00000485705 TCERG1O14776 1098 aaKnown RBP20■□□□□ 0.79
RPUSD3-217ENST00000485705 VAMP4O75379 141 aa20■□□□□ 0.79
RPUSD3-217ENST00000485705 FLAD1Q8NFF5 587 aa20■□□□□ 0.79
RPUSD3-217ENST00000485705 CHPF2Q9P2E5 772 aa20■□□□□ 0.79
RPUSD3-217ENST00000485705 ADRA2BP18089 450 aa19.99■□□□□ 0.79
RPUSD3-217ENST00000485705 LRP10Q7Z4F1 713 aa19.99■□□□□ 0.79
RPUSD3-217ENST00000485705 SRP68Q9UHB9 627 aaKnown RBP19.99■□□□□ 0.79
RPUSD3-217ENST00000485705 ERBB4Q15303 1308 aa19.99■□□□□ 0.79
RPUSD3-217ENST00000485705 RFC4P35249 363 aa19.98■□□□□ 0.79
RPUSD3-217ENST00000485705 TBC1D2BQ9UPU7 963 aa19.98■□□□□ 0.79
RPUSD3-217ENST00000485705 ZBTB7AO95365 584 aa19.97■□□□□ 0.79
RPUSD3-217ENST00000485705 DDX21Q9NR30 783 aaKnown RBP eCLIP19.97■□□□□ 0.79
RPUSD3-217ENST00000485705 TTLL7Q6ZT98 887 aa19.96■□□□□ 0.79
RPUSD3-217ENST00000485705 ARXQ96QS3 562 aa19.96■□□□□ 0.79
RPUSD3-217ENST00000485705 CACNA1FO60840 1977 aa19.95■□□□□ 0.78
RPUSD3-217ENST00000485705 CCDC30Q5VVM6 783 aa19.95■□□□□ 0.78
RPUSD3-217ENST00000485705 MSL1Q68DK7 614 aa19.95■□□□□ 0.78
RPUSD3-217ENST00000485705 DZIP3Q86Y13 1208 aaKnown RBP19.95■□□□□ 0.78
RPUSD3-217ENST00000485705 DBF4Q9UBU7 674 aaPredicted RBP19.95■□□□□ 0.78
RPUSD3-217ENST00000485705 NARFQ9UHQ1 456 aa19.95■□□□□ 0.78
RPUSD3-217ENST00000485705 ATF5Q9Y2D1 282 aaPredicted RBP19.95■□□□□ 0.78
RPUSD3-217ENST00000485705 USP42Q9H9J4 1324 aaKnown RBP19.95■□□□□ 0.78
RPUSD3-217ENST00000485705 A0A087WZG4 1122 aa19.94■□□□□ 0.78
RPUSD3-217ENST00000485705 USPL1Q5W0Q7 1092 aa19.94■□□□□ 0.78
RPUSD3-217ENST00000485705 GYS1P13807 737 aa19.93■□□□□ 0.78
RPUSD3-217ENST00000485705 NPM2Q86SE8 214 aaKnown RBP19.93■□□□□ 0.78
RPUSD3-217ENST00000485705 SLC16A10Q8TF71 515 aa19.93■□□□□ 0.78
RPUSD3-217ENST00000485705 XAGE3Q8WTP9 111 aa19.93■□□□□ 0.78
RPUSD3-217ENST00000485705 BCL2L12Q9HB09 334 aa19.93■□□□□ 0.78
RPUSD3-217ENST00000485705 BCORQ6W2J9 1755 aa19.93■□□□□ 0.78
RPUSD3-217ENST00000485705 SCN7AQ01118 1682 aa19.92■□□□□ 0.78
RPUSD3-217ENST00000485705 ZPR1O75312 459 aa19.92■□□□□ 0.78
RPUSD3-217ENST00000485705 CAMTA2O94983 1202 aa19.92■□□□□ 0.78
RPUSD3-217ENST00000485705 AIMP1Q12904 312 aaKnown RBP19.92■□□□□ 0.78
RPUSD3-217ENST00000485705 COPS6Q7L5N1 327 aa19.92■□□□□ 0.78
RPUSD3-217ENST00000485705 MTFR1LQ9H019 292 aa19.92■□□□□ 0.78
RPUSD3-217ENST00000485705 PHAXQ9H814 394 aaKnown RBP19.92■□□□□ 0.78
RPUSD3-217ENST00000485705 COL24A1Q17RW2 1714 aa19.91■□□□□ 0.78
RPUSD3-217ENST00000485705 NUP98P52948 1817 aa19.91■□□□□ 0.78
RPUSD3-217ENST00000485705 FKBP8Q14318 412 aa19.91■□□□□ 0.78
RPUSD3-217ENST00000485705 G2E3Q7L622 706 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms