RNA–Protein interactions for RNA: ENST00000485373.5

RTCB-204, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-204ENST00000485373 SSFA2P28290 1259 aa11.9□□□□□ -0.5
RTCB-204ENST00000485373 SMIM5Q71RC9 77 aa11.9□□□□□ -0.5
RTCB-204ENST00000485373 NGEFQ8N5V2 710 aa11.9□□□□□ -0.5
RTCB-204ENST00000485373 PDGFDQ9GZP0 370 aaPredicted RBP11.9□□□□□ -0.5
RTCB-204ENST00000485373 ZNF330Q9Y3S2 320 aaPredicted RBP11.9□□□□□ -0.5
RTCB-204ENST00000485373 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
RTCB-204ENST00000485373 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
RTCB-204ENST00000485373 ZBTB7AO95365 584 aa11.89□□□□□ -0.51
RTCB-204ENST00000485373 CANXP27824 592 aaKnown RBP11.89□□□□□ -0.51
RTCB-204ENST00000485373 NCBP3Q53F19 620 aaKnown RBP11.89□□□□□ -0.51
RTCB-204ENST00000485373 NPM2Q86SE8 214 aaKnown RBP11.89□□□□□ -0.51
RTCB-204ENST00000485373 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
RTCB-204ENST00000485373 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
RTCB-204ENST00000485373 ZBTB1Q9Y2K1 713 aa11.89□□□□□ -0.51
RTCB-204ENST00000485373 GIGYF1O75420 1035 aaPredicted RBP11.88□□□□□ -0.51
RTCB-204ENST00000485373 TRAPPC3LQ5T215 181 aa11.88□□□□□ -0.51
RTCB-204ENST00000485373 INTS5Q6P9B9 1019 aaKnown RBP11.88□□□□□ -0.51
RTCB-204ENST00000485373 AMIGO3Q86WK7 504 aa11.88□□□□□ -0.51
RTCB-204ENST00000485373 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
RTCB-204ENST00000485373 USP16Q9Y5T5 823 aa11.88□□□□□ -0.51
RTCB-204ENST00000485373 C4AP0C0L4 1744 aa11.88□□□□□ -0.51
RTCB-204ENST00000485373 A1BGP04217 495 aa11.87□□□□□ -0.51
RTCB-204ENST00000485373 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
RTCB-204ENST00000485373 ADRA2BP18089 450 aa11.87□□□□□ -0.51
RTCB-204ENST00000485373 EIF2S2P20042 333 aaKnown RBP11.87□□□□□ -0.51
RTCB-204ENST00000485373 RFC4P35249 363 aa11.87□□□□□ -0.51
RTCB-204ENST00000485373 WDR63Q8IWG1 891 aa11.87□□□□□ -0.51
RTCB-204ENST00000485373 ARXQ96QS3 562 aa11.87□□□□□ -0.51
RTCB-204ENST00000485373 SPON1Q9HCB6 807 aa11.87□□□□□ -0.51
RTCB-204ENST00000485373 COL15A1P39059 1388 aa11.87□□□□□ -0.51
RTCB-204ENST00000485373 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
RTCB-204ENST00000485373 IL16Q14005 1332 aa11.86□□□□□ -0.51
RTCB-204ENST00000485373 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
RTCB-204ENST00000485373 KRT24Q2M2I5 525 aa11.86□□□□□ -0.51
RTCB-204ENST00000485373 MSL1Q68DK7 614 aa11.86□□□□□ -0.51
RTCB-204ENST00000485373 SLC16A10Q8TF71 515 aa11.86□□□□□ -0.51
RTCB-204ENST00000485373 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
RTCB-204ENST00000485373 ARHGEF1Q92888 912 aaKnown RBP11.86□□□□□ -0.51
RTCB-204ENST00000485373 TSR2Q969E8 191 aaKnown RBP11.86□□□□□ -0.51
RTCB-204ENST00000485373 MTFR1LQ9H019 292 aa11.86□□□□□ -0.51
RTCB-204ENST00000485373 DUSP27Q5VZP5 1158 aa11.85□□□□□ -0.51
RTCB-204ENST00000485373 A0A087WZG4 1122 aa11.84□□□□□ -0.51
RTCB-204ENST00000485373 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
RTCB-204ENST00000485373 ZPR1O75312 459 aa11.84□□□□□ -0.51
RTCB-204ENST00000485373 POLD1P28340 1107 aa11.84□□□□□ -0.51
RTCB-204ENST00000485373 IL6STP40189 918 aaPredicted RBP11.84□□□□□ -0.51
RTCB-204ENST00000485373 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
RTCB-204ENST00000485373 MYH16Q9H6N6 1097 aa11.84□□□□□ -0.51
RTCB-204ENST00000485373 PPP1R1BQ9UD71 204 aaPredicted RBP11.84□□□□□ -0.51
RTCB-204ENST00000485373 LRP5O75197 1615 aa11.84□□□□□ -0.51
RTCB-204ENST00000485373 FANCIQ9NVI1 1328 aa11.84□□□□□ -0.51
RTCB-204ENST00000485373 HOXB7P09629 217 aa11.83□□□□□ -0.52
RTCB-204ENST00000485373 MYL6BP14649 208 aa11.83□□□□□ -0.52
RTCB-204ENST00000485373 EIF5P55010 431 aaKnown RBP11.83□□□□□ -0.52
RTCB-204ENST00000485373 GOLGA2Q08379 1002 aa11.83□□□□□ -0.52
RTCB-204ENST00000485373 HDGFL1Q5TGJ6 251 aa11.83□□□□□ -0.52
RTCB-204ENST00000485373 SRP68Q9UHB9 627 aaKnown RBP11.83□□□□□ -0.52
RTCB-204ENST00000485373 ERBB4Q15303 1308 aa11.83□□□□□ -0.52
RTCB-204ENST00000485373 USP42Q9H9J4 1324 aaKnown RBP11.83□□□□□ -0.52
RTCB-204ENST00000485373 NBPF26B4DH59 902 aa11.82□□□□□ -0.52
RTCB-204ENST00000485373 NBPF10Q6P3W6 841 aaKnown RBP11.82□□□□□ -0.52
RTCB-204ENST00000485373 NBPF15Q8N660 670 aa11.82□□□□□ -0.52
RTCB-204ENST00000485373 C8orf58Q8NAV2 365 aa11.82□□□□□ -0.52
RTCB-204ENST00000485373 TBC1D2BQ9UPU7 963 aa11.82□□□□□ -0.52
RTCB-204ENST00000485373 ZNF521Q96K83 1311 aa11.82□□□□□ -0.52
RTCB-204ENST00000485373 SCN7AQ01118 1682 aa11.81□□□□□ -0.52
RTCB-204ENST00000485373 ANXA1P04083 346 aa11.81□□□□□ -0.52
RTCB-204ENST00000485373 USPL1Q5W0Q7 1092 aa11.81□□□□□ -0.52
RTCB-204ENST00000485373 DZIP3Q86Y13 1208 aaKnown RBP11.81□□□□□ -0.52
RTCB-204ENST00000485373 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
RTCB-204ENST00000485373 NARFQ9UHQ1 456 aa11.81□□□□□ -0.52
RTCB-204ENST00000485373 BCORQ6W2J9 1755 aa11.8□□□□□ -0.52
RTCB-204ENST00000485373 E9PSI1 815 aa11.8□□□□□ -0.52
RTCB-204ENST00000485373 GYS1P13807 737 aa11.8□□□□□ -0.52
RTCB-204ENST00000485373 EXOSC9Q06265 439 aaKnown RBP11.8□□□□□ -0.52
RTCB-204ENST00000485373 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
RTCB-204ENST00000485373 KIF6Q6ZMV9 814 aa11.8□□□□□ -0.52
RTCB-204ENST00000485373 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
RTCB-204ENST00000485373 NLGN1Q8N2Q7 840 aa11.8□□□□□ -0.52
RTCB-204ENST00000485373 TSPYL6Q8N831 410 aa11.8□□□□□ -0.52
RTCB-204ENST00000485373 CHMP4AQ9BY43 222 aa11.8□□□□□ -0.52
RTCB-204ENST00000485373 CHPF2Q9P2E5 772 aa11.8□□□□□ -0.52
RTCB-204ENST00000485373 COL24A1Q17RW2 1714 aa11.8□□□□□ -0.52
RTCB-204ENST00000485373 MMP10P09238 476 aa11.79□□□□□ -0.52
RTCB-204ENST00000485373 PTGER2P43116 358 aa11.79□□□□□ -0.52
RTCB-204ENST00000485373 PROSER3Q2NL68 480 aa11.79□□□□□ -0.52
RTCB-204ENST00000485373 DDX21Q9NR30 783 aaKnown RBP eCLIP11.79□□□□□ -0.52
RTCB-204ENST00000485373 CAMTA2O94983 1202 aa11.78□□□□□ -0.52
RTCB-204ENST00000485373 AIMP1Q12904 312 aaKnown RBP11.78□□□□□ -0.52
RTCB-204ENST00000485373 FKBP8Q14318 412 aa11.78□□□□□ -0.52
RTCB-204ENST00000485373 CCDC30Q5VVM6 783 aa11.78□□□□□ -0.52
RTCB-204ENST00000485373 BICDL1Q6ZP65 573 aa11.78□□□□□ -0.52
RTCB-204ENST00000485373 CDCA7LQ96GN5 454 aa11.78□□□□□ -0.52
RTCB-204ENST00000485373 STK31Q9BXU1 1019 aa11.78□□□□□ -0.52
RTCB-204ENST00000485373 DBF4Q9UBU7 674 aaPredicted RBP11.78□□□□□ -0.52
RTCB-204ENST00000485373 ZNF652Q9Y2D9 606 aa11.78□□□□□ -0.52
RTCB-204ENST00000485373 PARP3Q9Y6F1 533 aa11.78□□□□□ -0.52
RTCB-204ENST00000485373 NUP98P52948 1817 aa11.77□□□□□ -0.52
RTCB-204ENST00000485373 TCERG1O14776 1098 aaKnown RBP11.77□□□□□ -0.53
RTCB-204ENST00000485373 SLFN5Q08AF3 891 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms