RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 ITGB4P16144 1822 aa13.78□□□□□ -0.2
TRUB1-202ENST00000485065 ST20-MTHFSA0A0A6YYL1 179 aa13.78□□□□□ -0.2
TRUB1-202ENST00000485065 GNPATO15228 680 aa13.78□□□□□ -0.2
TRUB1-202ENST00000485065 CYP27B1O15528 508 aa13.78□□□□□ -0.2
TRUB1-202ENST00000485065 NKX1-1Q15270 411 aaPredicted RBP13.78□□□□□ -0.2
TRUB1-202ENST00000485065 TMC1Q8TDI8 760 aa13.78□□□□□ -0.2
TRUB1-202ENST00000485065 COG3Q96JB2 828 aa13.78□□□□□ -0.2
TRUB1-202ENST00000485065 RNF181Q9P0P0 153 aa13.78□□□□□ -0.2
TRUB1-202ENST00000485065 PIM2Q9P1W9 311 aa13.78□□□□□ -0.2
TRUB1-202ENST00000485065 NUBP1P53384 320 aa13.77□□□□□ -0.21
TRUB1-202ENST00000485065 PCGF6Q9BYE7 350 aa13.77□□□□□ -0.21
TRUB1-202ENST00000485065 PRDM10Q9NQV6 1147 aa13.77□□□□□ -0.21
TRUB1-202ENST00000485065 SBF1O95248 1867 aa13.76□□□□□ -0.21
TRUB1-202ENST00000485065 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
TRUB1-202ENST00000485065 VEGFAP15692 232 aaPredicted RBP13.76□□□□□ -0.21
TRUB1-202ENST00000485065 TRAPPC3LQ5T215 181 aa13.76□□□□□ -0.21
TRUB1-202ENST00000485065 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
TRUB1-202ENST00000485065 SMG6Q86US8 1419 aaKnown RBP13.75□□□□□ -0.21
TRUB1-202ENST00000485065 DALRD3Q5D0E6 543 aaKnown RBP13.75□□□□□ -0.21
TRUB1-202ENST00000485065 ITPK1Q13572 414 aa13.74□□□□□ -0.21
TRUB1-202ENST00000485065 RTCBQ9Y3I0 505 aaKnown RBP13.74□□□□□ -0.21
TRUB1-202ENST00000485065 PCDHB13Q9Y5F0 798 aa13.74□□□□□ -0.21
TRUB1-202ENST00000485065 PARP3Q9Y6F1 533 aa13.74□□□□□ -0.21
TRUB1-202ENST00000485065 C4AP0C0L4 1744 aa13.73□□□□□ -0.21
TRUB1-202ENST00000485065 GLTPD2A6NH11 291 aa13.73□□□□□ -0.21
TRUB1-202ENST00000485065 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
TRUB1-202ENST00000485065 IER5LQ5T953 404 aa13.73□□□□□ -0.21
TRUB1-202ENST00000485065 RC3H1Q5TC82 1133 aaKnown RBP13.73□□□□□ -0.21
TRUB1-202ENST00000485065 PLCD3Q8N3E9 789 aa13.73□□□□□ -0.21
TRUB1-202ENST00000485065 USHBP1Q8N6Y0 703 aa13.73□□□□□ -0.21
TRUB1-202ENST00000485065 SEC24BO95487 1268 aa13.72□□□□□ -0.21
TRUB1-202ENST00000485065 GYS1P13807 737 aa13.72□□□□□ -0.21
TRUB1-202ENST00000485065 FBLN1P23142 703 aa13.72□□□□□ -0.21
TRUB1-202ENST00000485065 KDM6AO15550 1401 aaPredicted RBP13.72□□□□□ -0.21
TRUB1-202ENST00000485065 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
TRUB1-202ENST00000485065 ARHGEF1Q92888 912 aaKnown RBP13.71□□□□□ -0.21
TRUB1-202ENST00000485065 TMOD3Q9NYL9 352 aa13.71□□□□□ -0.21
TRUB1-202ENST00000485065 ASAP1Q9ULH1 1129 aa13.71□□□□□ -0.21
TRUB1-202ENST00000485065 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
TRUB1-202ENST00000485065 INSRP06213 1382 aa13.71□□□□□ -0.22
TRUB1-202ENST00000485065 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.22
TRUB1-202ENST00000485065 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
TRUB1-202ENST00000485065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.7□□□□□ -0.222e-6■■□□□ 11.9
TRUB1-202ENST00000485065 FOXN1O15353 648 aa13.69□□□□□ -0.22
TRUB1-202ENST00000485065 LMNB1P20700 586 aa13.69□□□□□ -0.22
TRUB1-202ENST00000485065 RFC4P35249 363 aa13.69□□□□□ -0.22
TRUB1-202ENST00000485065 RRS1Q15050 365 aaKnown RBP13.69□□□□□ -0.22
TRUB1-202ENST00000485065 SPG7Q9UQ90 795 aa13.69□□□□□ -0.22
TRUB1-202ENST00000485065 ZNF831Q5JPB2 1677 aa13.69□□□□□ -0.22
TRUB1-202ENST00000485065 CNTNAP4Q9C0A0 1308 aa13.68□□□□□ -0.22
TRUB1-202ENST00000485065 RPS6KA4O75676 772 aa13.68□□□□□ -0.22
TRUB1-202ENST00000485065 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
TRUB1-202ENST00000485065 ATG3Q9NT62 314 aa13.68□□□□□ -0.22
TRUB1-202ENST00000485065 NCAPD2Q15021 1401 aa13.67□□□□□ -0.22
TRUB1-202ENST00000485065 HSP90AB2PQ58FF8 381 aa13.67□□□□□ -0.22
TRUB1-202ENST00000485065 KDRP35968 1356 aa13.67□□□□□ -0.22
TRUB1-202ENST00000485065 POTECB2RU33 542 aa13.66□□□□□ -0.22
TRUB1-202ENST00000485065 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
TRUB1-202ENST00000485065 FLT4P35916 1363 aa13.66□□□□□ -0.22
TRUB1-202ENST00000485065 RGS19P49795 217 aa13.65□□□□□ -0.22
TRUB1-202ENST00000485065 CNTNAP1P78357 1384 aa13.64□□□□□ -0.23
TRUB1-202ENST00000485065 FYB1O15117 783 aa13.64□□□□□ -0.23
TRUB1-202ENST00000485065 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
TRUB1-202ENST00000485065 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
TRUB1-202ENST00000485065 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
TRUB1-202ENST00000485065 SLC4A9Q96Q91 983 aa13.64□□□□□ -0.23
TRUB1-202ENST00000485065 ZBTB47Q9UFB7 747 aaPredicted RBP13.64□□□□□ -0.23
TRUB1-202ENST00000485065 MKRN1Q9UHC7 482 aaKnown RBP13.64□□□□□ -0.23
TRUB1-202ENST00000485065 SLC24A1O60721 1099 aa13.63□□□□□ -0.23
TRUB1-202ENST00000485065 CHRNA5P30532 468 aa13.63□□□□□ -0.23
TRUB1-202ENST00000485065 ABHD8Q96I13 439 aa13.63□□□□□ -0.23
TRUB1-202ENST00000485065 WBP1LQ9NX94 342 aa13.63□□□□□ -0.23
TRUB1-202ENST00000485065 MYH14Q7Z406 1995 aaKnown RBP13.62□□□□□ -0.23
TRUB1-202ENST00000485065 PHKG2P15735 406 aa13.62□□□□□ -0.23
TRUB1-202ENST00000485065 RASSF7Q02833 373 aa13.62□□□□□ -0.23
TRUB1-202ENST00000485065 MLLT1Q03111 559 aaPredicted RBP13.62□□□□□ -0.23
TRUB1-202ENST00000485065 DDR1Q08345 913 aa13.62□□□□□ -0.23
TRUB1-202ENST00000485065 COL5A3P25940 1745 aaPredicted RBP13.61□□□□□ -0.23
TRUB1-202ENST00000485065 ERVV-2B6SEH9 535 aa13.61□□□□□ -0.23
TRUB1-202ENST00000485065 TM4SF1P30408 202 aa13.61□□□□□ -0.23
TRUB1-202ENST00000485065 FKBP8Q14318 412 aa13.61□□□□□ -0.23
TRUB1-202ENST00000485065 TMEM106CQ9BVX2 250 aa13.61□□□□□ -0.23
TRUB1-202ENST00000485065 CARD14Q9BXL6 1004 aa13.61□□□□□ -0.23
TRUB1-202ENST00000485065 USP42Q9H9J4 1324 aaKnown RBP13.61□□□□□ -0.23
TRUB1-202ENST00000485065 POLRMTO00411 1230 aaKnown RBP13.6□□□□□ -0.23
TRUB1-202ENST00000485065 CCER1Q8TC90 406 aaPredicted RBP13.6□□□□□ -0.23
TRUB1-202ENST00000485065 FAM212AQ96EL1 285 aa13.6□□□□□ -0.23
TRUB1-202ENST00000485065 CCDC88AQ3V6T2 1871 aa13.59□□□□□ -0.23
TRUB1-202ENST00000485065 LBX1P52954 281 aa13.59□□□□□ -0.23
TRUB1-202ENST00000485065 TTLL6Q8N841 843 aa13.59□□□□□ -0.23
TRUB1-202ENST00000485065 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
TRUB1-202ENST00000485065 PASKQ96RG2 1323 aa13.58□□□□□ -0.24
TRUB1-202ENST00000485065 TIAM2Q8IVF5 1701 aa13.57□□□□□ -0.24
TRUB1-202ENST00000485065 NFKBIEO00221 500 aa13.57□□□□□ -0.24
TRUB1-202ENST00000485065 HSP90AB1P08238 724 aaKnown RBP13.57□□□□□ -0.24
TRUB1-202ENST00000485065 VEGFBP49765 207 aa13.57□□□□□ -0.24
TRUB1-202ENST00000485065 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
TRUB1-202ENST00000485065 SRP68Q9UHB9 627 aaKnown RBP13.57□□□□□ -0.24
TRUB1-202ENST00000485065 VIRMAQ69YN4 1812 aaKnown RBP13.57□□□□□ -0.24
TRUB1-202ENST00000485065 HSPA8P11142 646 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms