RNA–Protein interactions for RNA: ENST00000484453.1

RTKN-209, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-209ENST00000484453 POLD1P28340 1107 aa29.19■■■□□ 2.26
RTKN-209ENST00000484453 INTS5Q6P9B9 1019 aaKnown RBP29.18■■■□□ 2.26
RTKN-209ENST00000484453 KLHL34Q8N239 644 aa29.18■■■□□ 2.26
RTKN-209ENST00000484453 PNISRQ8TF01 805 aaKnown RBP29.18■■■□□ 2.26
RTKN-209ENST00000484453 ADRA2BP18089 450 aa29.17■■■□□ 2.26
RTKN-209ENST00000484453 APAF1O14727 1248 aa29.16■■■□□ 2.26
RTKN-209ENST00000484453 STARD3NLO95772 234 aa29.16■■■□□ 2.26
RTKN-209ENST00000484453 ARHGEF1Q92888 912 aaKnown RBP29.16■■■□□ 2.26
RTKN-209ENST00000484453 TEX13AQ9BXU3 409 aaPredicted RBP29.16■■■□□ 2.26
RTKN-209ENST00000484453 RFC4P35249 363 aa29.15■■■□□ 2.26
RTKN-209ENST00000484453 ZBTB1Q9Y2K1 713 aa29.15■■■□□ 2.26
RTKN-209ENST00000484453 TRIM35Q9UPQ4 493 aa29.14■■■□□ 2.26
RTKN-209ENST00000484453 DCAF8L1A6NGE4 600 aa29.13■■■□□ 2.25
RTKN-209ENST00000484453 YY1P25490 414 aa29.13■■■□□ 2.25
RTKN-209ENST00000484453 SOS1Q07889 1333 aaPredicted RBP29.13■■■□□ 2.25
RTKN-209ENST00000484453 CANXP27824 592 aaKnown RBP29.12■■■□□ 2.25
RTKN-209ENST00000484453 TSPYL4Q9UJ04 414 aa29.12■■■□□ 2.25
RTKN-209ENST00000484453 COL15A1P39059 1388 aa29.12■■■□□ 2.25
RTKN-209ENST00000484453 BCORQ6W2J9 1755 aa29.11■■■□□ 2.25
RTKN-209ENST00000484453 PRAMEF22A3QJZ6 481 aa29.11■■■□□ 2.25
RTKN-209ENST00000484453 SNRPA1P09661 255 aaKnown RBP29.11■■■□□ 2.25
RTKN-209ENST00000484453 SCN7AQ01118 1682 aa29.11■■■□□ 2.25
RTKN-209ENST00000484453 NLGN2Q8NFZ4 835 aa29.09■■■□□ 2.25
RTKN-209ENST00000484453 USP16Q9Y5T5 823 aa29.09■■■□□ 2.25
RTKN-209ENST00000484453 LAS1LQ9Y4W2 734 aaKnown RBP29.08■■■□□ 2.25
RTKN-209ENST00000484453 SENP3-EIF4A1A0A087X0R7 540 aa29.07■■■□□ 2.24
RTKN-209ENST00000484453 SRP68Q9UHB9 627 aaKnown RBP29.07■■■□□ 2.24
RTKN-209ENST00000484453 ZNF330Q9Y3S2 320 aaPredicted RBP29.07■■■□□ 2.24
RTKN-209ENST00000484453 AFDNP55196 1824 aaKnown RBP29.06■■■□□ 2.24
RTKN-209ENST00000484453 USP42Q9H9J4 1324 aaKnown RBP29.06■■■□□ 2.24
RTKN-209ENST00000484453 A1BGP04217 495 aa29.06■■■□□ 2.24
RTKN-209ENST00000484453 EIF4A1P60842 406 aaKnown RBP29.06■■■□□ 2.24
RTKN-209ENST00000484453 FAM9BQ8IZU0 186 aa29.06■■■□□ 2.24
RTKN-209ENST00000484453 GYS1P13807 737 aa29.05■■■□□ 2.24
RTKN-209ENST00000484453 KIF13BQ9NQT8 1826 aa29.05■■■□□ 2.24
RTKN-209ENST00000484453 ZPR1O75312 459 aa29.04■■■□□ 2.24
RTKN-209ENST00000484453 BABAM1Q9NWV8 329 aa29.04■■■□□ 2.24
RTKN-209ENST00000484453 NLGN1Q8N2Q7 840 aa29.03■■■□□ 2.24
RTKN-209ENST00000484453 GIGYF1O75420 1035 aaPredicted RBP29.02■■■□□ 2.24
RTKN-209ENST00000484453 PIP4K2AP48426 406 aaPredicted RBP29.02■■■□□ 2.24
RTKN-209ENST00000484453 EIF5P55010 431 aaKnown RBP29.02■■■□□ 2.24
RTKN-209ENST00000484453 MMP10P09238 476 aa29.01■■■□□ 2.23
RTKN-209ENST00000484453 IL6STP40189 918 aaPredicted RBP29.01■■■□□ 2.23
RTKN-209ENST00000484453 USPL1Q5W0Q7 1092 aa29.01■■■□□ 2.23
RTKN-209ENST00000484453 NPM2Q86SE8 214 aaKnown RBP29.01■■■□□ 2.23
RTKN-209ENST00000484453 NARFQ9UHQ1 456 aa29■■■□□ 2.23
RTKN-209ENST00000484453 UTRNP46939 3433 aa29■■■□□ 2.23
RTKN-209ENST00000484453 NUP98P52948 1817 aa28.99■■■□□ 2.23
RTKN-209ENST00000484453 N4BP2Q86UW6 1770 aaPredicted RBP28.99■■■□□ 2.23
RTKN-209ENST00000484453 A0A087WZG4 1122 aa28.99■■■□□ 2.23
RTKN-209ENST00000484453 PELP1Q8IZL8 1130 aaKnown RBP28.99■■■□□ 2.23
RTKN-209ENST00000484453 CHL1O00533 1208 aa28.98■■■□□ 2.23
RTKN-209ENST00000484453 CALD1Q05682 793 aaKnown RBP28.98■■■□□ 2.23
RTKN-209ENST00000484453 FKBP8Q14318 412 aa28.98■■■□□ 2.23
RTKN-209ENST00000484453 GPR162Q16538 588 aa28.98■■■□□ 2.23
RTKN-209ENST00000484453 CFAP44Q96MT7 982 aa28.96■■■□□ 2.23
RTKN-209ENST00000484453 TBC1D2BQ9UPU7 963 aa28.96■■■□□ 2.23
RTKN-209ENST00000484453 DIEXFQ68CQ4 756 aaKnown RBP28.95■■■□□ 2.22
RTKN-209ENST00000484453 PARP3Q9Y6F1 533 aa28.95■■■□□ 2.22
RTKN-209ENST00000484453 KIAA1551Q9HCM1 1747 aa28.94■■■□□ 2.22
RTKN-209ENST00000484453 NBPF26B4DH59 902 aa28.94■■■□□ 2.22
RTKN-209ENST00000484453 NBPF10Q6P3W6 841 aaKnown RBP28.94■■■□□ 2.22
RTKN-209ENST00000484453 NBPF15Q8N660 670 aa28.94■■■□□ 2.22
RTKN-209ENST00000484453 NRXN2Q9P2S2 1712 aa28.94■■■□□ 2.22
RTKN-209ENST00000484453 MBIPQ9NS73 344 aa28.93■■■□□ 2.22
RTKN-209ENST00000484453 IFT57Q9NWB7 429 aa28.93■■■□□ 2.22
RTKN-209ENST00000484453 SALL2Q9Y467 1007 aaPredicted RBP28.93■■■□□ 2.22
RTKN-209ENST00000484453 YBX3P16989 372 aaKnown RBP eCLIP28.92■■■□□ 2.22
RTKN-209ENST00000484453 GNAI1P63096 354 aa28.92■■■□□ 2.22
RTKN-209ENST00000484453 KRT24Q2M2I5 525 aa28.92■■■□□ 2.22
RTKN-209ENST00000484453 DZIP3Q86Y13 1208 aaKnown RBP28.92■■■□□ 2.22
RTKN-209ENST00000484453 EIF2S2P20042 333 aaKnown RBP28.91■■■□□ 2.22
RTKN-209ENST00000484453 CCDC27Q2M243 656 aa28.91■■■□□ 2.22
RTKN-209ENST00000484453 BCL2L12Q9HB09 334 aa28.91■■■□□ 2.22
RTKN-209ENST00000484453 ZNF853P0CG23 659 aa28.9■■■□□ 2.22
RTKN-209ENST00000484453 WWC1Q8IX03 1113 aa28.9■■■□□ 2.22
RTKN-209ENST00000484453 CD2APQ9Y5K6 639 aa28.9■■■□□ 2.22
RTKN-209ENST00000484453 BRCA1P38398 1863 aaKnown RBP28.89■■■□□ 2.22
RTKN-209ENST00000484453 CCER2I3L3R5 266 aa28.89■■■□□ 2.22
RTKN-209ENST00000484453 MYL6BP14649 208 aa28.89■■■□□ 2.22
RTKN-209ENST00000484453 DDR1Q08345 913 aa28.89■■■□□ 2.22
RTKN-209ENST00000484453 NGEFQ8N5V2 710 aa28.89■■■□□ 2.22
RTKN-209ENST00000484453 NECTIN2Q92692 538 aa28.88■■■□□ 2.21
RTKN-209ENST00000484453 WWC3Q9ULE0 1092 aa28.88■■■□□ 2.21
RTKN-209ENST00000484453 CHD4Q14839 1912 aa28.88■■■□□ 2.21
RTKN-209ENST00000484453 ANKRD36CQ5JPF3 1778 aa28.88■■■□□ 2.21
RTKN-209ENST00000484453 CAMTA2O94983 1202 aa28.87■■■□□ 2.21
RTKN-209ENST00000484453 TM4SF1P30408 202 aa28.87■■■□□ 2.21
RTKN-209ENST00000484453 NFIXQ14938 502 aa28.87■■■□□ 2.21
RTKN-209ENST00000484453 BICDL1Q6ZP65 573 aa28.87■■■□□ 2.21
RTKN-209ENST00000484453 ERBB4Q15303 1308 aa28.87■■■□□ 2.21
RTKN-209ENST00000484453 C10orf71Q711Q0 1435 aa28.86■■■□□ 2.21
RTKN-209ENST00000484453 ANKRD31Q8N7Z5 1873 aa28.86■■■□□ 2.21
RTKN-209ENST00000484453 GOLGB1Q14789 3259 aaKnown RBP28.85■■■□□ 2.21
RTKN-209ENST00000484453 POLRMTO00411 1230 aaKnown RBP28.85■■■□□ 2.21
RTKN-209ENST00000484453 NCBP3Q53F19 620 aaKnown RBP28.85■■■□□ 2.21
RTKN-209ENST00000484453 TBC1D9BQ66K14 1250 aa28.84■■■□□ 2.21
RTKN-209ENST00000484453 ZNF784Q8NCA9 323 aaPredicted RBP28.84■■■□□ 2.21
RTKN-209ENST00000484453 DLEC1Q9Y238 1755 aa28.83■■■□□ 2.21
RTKN-209ENST00000484453 CACNA1SQ13698 1873 aa28.83■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms