RNA–Protein interactions for RNA: ENST00000484375.5

ARPC1B-218, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-218ENST00000484375 PSDA5PKW4 1024 aaPredicted RBP29.34■■■□□ 2.29
ARPC1B-218ENST00000484375 MBIPQ9NS73 344 aa29.34■■■□□ 2.29
ARPC1B-218ENST00000484375 RTCBQ9Y3I0 505 aaKnown RBP29.34■■■□□ 2.29
ARPC1B-218ENST00000484375 GIGYF1O75420 1035 aaPredicted RBP29.33■■■□□ 2.29
ARPC1B-218ENST00000484375 ADRA2BP18089 450 aa29.33■■■□□ 2.29
ARPC1B-218ENST00000484375 PNPLA7Q6ZV29 1317 aa29.31■■■□□ 2.28
ARPC1B-218ENST00000484375 ZNF521Q96K83 1311 aa29.31■■■□□ 2.28
ARPC1B-218ENST00000484375 RPS6KA4O75676 772 aa29.31■■■□□ 2.28
ARPC1B-218ENST00000484375 HOXB7P09629 217 aa29.3■■■□□ 2.28
ARPC1B-218ENST00000484375 MYH16Q9H6N6 1097 aa29.29■■■□□ 2.28
ARPC1B-218ENST00000484375 SOS1Q07889 1333 aaPredicted RBP29.28■■■□□ 2.28
ARPC1B-218ENST00000484375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.28■■■□□ 2.28
ARPC1B-218ENST00000484375 INTS5Q6P9B9 1019 aaKnown RBP29.28■■■□□ 2.28
ARPC1B-218ENST00000484375 SLC16A10Q8TF71 515 aa29.28■■■□□ 2.28
ARPC1B-218ENST00000484375 CHMP4AQ9BY43 222 aa29.28■■■□□ 2.28
ARPC1B-218ENST00000484375 NPM2Q86SE8 214 aaKnown RBP29.27■■■□□ 2.28
ARPC1B-218ENST00000484375 USP16Q9Y5T5 823 aa29.27■■■□□ 2.28
ARPC1B-218ENST00000484375 C4AP0C0L4 1744 aa29.27■■■□□ 2.28
ARPC1B-218ENST00000484375 ERBB4Q15303 1308 aa29.26■■■□□ 2.27
ARPC1B-218ENST00000484375 PHF14O94880 888 aa29.26■■■□□ 2.27
ARPC1B-218ENST00000484375 TRAPPC3LQ5T215 181 aa29.26■■■□□ 2.27
ARPC1B-218ENST00000484375 ZBTB1Q9Y2K1 713 aa29.26■■■□□ 2.27
ARPC1B-218ENST00000484375 GOLGA2Q08379 1002 aa29.25■■■□□ 2.27
ARPC1B-218ENST00000484375 PRAMEF22A3QJZ6 481 aa29.24■■■□□ 2.27
ARPC1B-218ENST00000484375 MSH5O43196 834 aa29.24■■■□□ 2.27
ARPC1B-218ENST00000484375 IL6STP40189 918 aaPredicted RBP29.24■■■□□ 2.27
ARPC1B-218ENST00000484375 HNRNPUQ00839 825 aaKnown RBP eCLIP29.23■■■□□ 2.27
ARPC1B-218ENST00000484375 COL23A1Q86Y22 540 aaPredicted RBP29.23■■■□□ 2.27
ARPC1B-218ENST00000484375 COL15A1P39059 1388 aa29.23■■■□□ 2.27
ARPC1B-218ENST00000484375 FANCIQ9NVI1 1328 aa29.22■■■□□ 2.27
ARPC1B-218ENST00000484375 A0A087WZG4 1122 aa29.22■■■□□ 2.27
ARPC1B-218ENST00000484375 E9PSI1 815 aa29.22■■■□□ 2.27
ARPC1B-218ENST00000484375 CANXP27824 592 aaKnown RBP29.22■■■□□ 2.27
ARPC1B-218ENST00000484375 TSR2Q969E8 191 aaKnown RBP29.22■■■□□ 2.27
ARPC1B-218ENST00000484375 RFC4P35249 363 aa29.21■■■□□ 2.27
ARPC1B-218ENST00000484375 MTFR1LQ9H019 292 aa29.21■■■□□ 2.27
ARPC1B-218ENST00000484375 A1BGP04217 495 aa29.2■■■□□ 2.26
ARPC1B-218ENST00000484375 DUSP27Q5VZP5 1158 aa29.2■■■□□ 2.26
ARPC1B-218ENST00000484375 EIF5P55010 431 aaKnown RBP29.19■■■□□ 2.26
ARPC1B-218ENST00000484375 COL24A1Q17RW2 1714 aa29.19■■■□□ 2.26
ARPC1B-218ENST00000484375 AMIGO3Q86WK7 504 aa29.18■■■□□ 2.26
ARPC1B-218ENST00000484375 ARHGEF1Q92888 912 aaKnown RBP29.18■■■□□ 2.26
ARPC1B-218ENST00000484375 LRP5O75197 1615 aa29.18■■■□□ 2.26
ARPC1B-218ENST00000484375 EIF2S2P20042 333 aaKnown RBP29.17■■■□□ 2.26
ARPC1B-218ENST00000484375 KRT24Q2M2I5 525 aa29.17■■■□□ 2.26
ARPC1B-218ENST00000484375 HDGFL1Q5TGJ6 251 aa29.17■■■□□ 2.26
ARPC1B-218ENST00000484375 PDGFDQ9GZP0 370 aaPredicted RBP29.16■■■□□ 2.26
ARPC1B-218ENST00000484375 SPON1Q9HCB6 807 aa29.16■■■□□ 2.26
ARPC1B-218ENST00000484375 SCN7AQ01118 1682 aa29.15■■■□□ 2.26
ARPC1B-218ENST00000484375 ZPR1O75312 459 aa29.15■■■□□ 2.26
ARPC1B-218ENST00000484375 ZNF330Q9Y3S2 320 aaPredicted RBP29.15■■■□□ 2.26
ARPC1B-218ENST00000484375 USP42Q9H9J4 1324 aaKnown RBP29.15■■■□□ 2.26
ARPC1B-218ENST00000484375 TWISTNBQ3B726 338 aaPredicted RBP29.14■■■□□ 2.26
ARPC1B-218ENST00000484375 SPINK5Q9NQ38 1064 aaPredicted RBP29.14■■■□□ 2.26
ARPC1B-218ENST00000484375 BCORQ6W2J9 1755 aa29.13■■■□□ 2.25
ARPC1B-218ENST00000484375 ZBTB7AO95365 584 aa29.13■■■□□ 2.25
ARPC1B-218ENST00000484375 SLFN5Q08AF3 891 aa29.13■■■□□ 2.25
ARPC1B-218ENST00000484375 C8orf58Q8NAV2 365 aa29.13■■■□□ 2.25
ARPC1B-218ENST00000484375 NARFQ9UHQ1 456 aa29.13■■■□□ 2.25
ARPC1B-218ENST00000484375 ZBED9Q6R2W3 1325 aa29.13■■■□□ 2.25
ARPC1B-218ENST00000484375 NBPF26B4DH59 902 aa29.12■■■□□ 2.25
ARPC1B-218ENST00000484375 NBPF10Q6P3W6 841 aaKnown RBP29.12■■■□□ 2.25
ARPC1B-218ENST00000484375 NBPF15Q8N660 670 aa29.12■■■□□ 2.25
ARPC1B-218ENST00000484375 DBF4Q9UBU7 674 aaPredicted RBP29.12■■■□□ 2.25
ARPC1B-218ENST00000484375 CCDC30Q5VVM6 783 aa29.11■■■□□ 2.25
ARPC1B-218ENST00000484375 SMIM5Q71RC9 77 aa29.11■■■□□ 2.25
ARPC1B-218ENST00000484375 DDX21Q9NR30 783 aaKnown RBP eCLIP29.11■■■□□ 2.25
ARPC1B-218ENST00000484375 CACNA1FO60840 1977 aa29.1■■■□□ 2.25
ARPC1B-218ENST00000484375 ELL2O00472 640 aaPredicted RBP29.1■■■□□ 2.25
ARPC1B-218ENST00000484375 RGL2O15211 777 aa29.1■■■□□ 2.25
ARPC1B-218ENST00000484375 NLGN1Q8N2Q7 840 aa29.1■■■□□ 2.25
ARPC1B-218ENST00000484375 MYL6BP14649 208 aa29.09■■■□□ 2.25
ARPC1B-218ENST00000484375 POLD1P28340 1107 aa29.09■■■□□ 2.25
ARPC1B-218ENST00000484375 PIP4K2AP48426 406 aaPredicted RBP29.09■■■□□ 2.25
ARPC1B-218ENST00000484375 EXOSC9Q06265 439 aaKnown RBP29.09■■■□□ 2.25
ARPC1B-218ENST00000484375 DZIP3Q86Y13 1208 aaKnown RBP29.09■■■□□ 2.25
ARPC1B-218ENST00000484375 TSPYL6Q8N831 410 aa29.08■■■□□ 2.25
ARPC1B-218ENST00000484375 GYS1P13807 737 aa29.07■■■□□ 2.24
ARPC1B-218ENST00000484375 NECTIN2Q92692 538 aa29.07■■■□□ 2.24
ARPC1B-218ENST00000484375 STK31Q9BXU1 1019 aa29.07■■■□□ 2.24
ARPC1B-218ENST00000484375 HYPKQ9NX55 129 aa29.07■■■□□ 2.24
ARPC1B-218ENST00000484375 CHPF2Q9P2E5 772 aa29.07■■■□□ 2.24
ARPC1B-218ENST00000484375 PDIA6Q15084 440 aa29.06■■■□□ 2.24
ARPC1B-218ENST00000484375 USPL1Q5W0Q7 1092 aa29.06■■■□□ 2.24
ARPC1B-218ENST00000484375 KIF6Q6ZMV9 814 aa29.06■■■□□ 2.24
ARPC1B-218ENST00000484375 ARXQ96QS3 562 aa29.06■■■□□ 2.24
ARPC1B-218ENST00000484375 ATF5Q9Y2D1 282 aaPredicted RBP29.06■■■□□ 2.24
ARPC1B-218ENST00000484375 ZNF652Q9Y2D9 606 aa29.06■■■□□ 2.24
ARPC1B-218ENST00000484375 TRMT2AQ8IZ69 625 aaKnown RBP29.05■■■□□ 2.24
ARPC1B-218ENST00000484375 SRP68Q9UHB9 627 aaKnown RBP29.05■■■□□ 2.24
ARPC1B-218ENST00000484375 CDCA7LQ96GN5 454 aa29.04■■■□□ 2.24
ARPC1B-218ENST00000484375 TBC1D2BQ9UPU7 963 aa29.04■■■□□ 2.24
ARPC1B-218ENST00000484375 MSL1Q68DK7 614 aa29.03■■■□□ 2.24
ARPC1B-218ENST00000484375 CLEC4GQ6UXB4 293 aa29.03■■■□□ 2.24
ARPC1B-218ENST00000484375 VAMP4O75379 141 aa29.02■■■□□ 2.24
ARPC1B-218ENST00000484375 CT47B1P0C2W7 299 aaPredicted RBP29.02■■■□□ 2.24
ARPC1B-218ENST00000484375 LRP10Q7Z4F1 713 aa29.02■■■□□ 2.24
ARPC1B-218ENST00000484375 ZNF428Q96B54 188 aa29.02■■■□□ 2.24
ARPC1B-218ENST00000484375 ERVV-1B6SEH8 477 aa29.01■■■□□ 2.23
ARPC1B-218ENST00000484375 CAMTA2O94983 1202 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms