RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 STARD3NLO95772 234 aa34.98■■■■□ 3.19
SMDT1-203ENST00000484235 CCDC87Q9NVE4 849 aa34.98■■■■□ 3.19
SMDT1-203ENST00000484235 COL5A3P25940 1745 aaPredicted RBP34.98■■■■□ 3.19
SMDT1-203ENST00000484235 ADRA2BP18089 450 aa34.97■■■■□ 3.19
SMDT1-203ENST00000484235 TJP1Q07157 1748 aa34.96■■■■□ 3.19
SMDT1-203ENST00000484235 BABAM1Q9NWV8 329 aa34.95■■■■□ 3.19
SMDT1-203ENST00000484235 UBR3Q6ZT12 1888 aa34.95■■■■□ 3.18
SMDT1-203ENST00000484235 SNRPA1P09661 255 aaKnown RBP34.93■■■■□ 3.18
SMDT1-203ENST00000484235 ARHGEF1Q92888 912 aaKnown RBP34.93■■■■□ 3.18
SMDT1-203ENST00000484235 POLD1P28340 1107 aa34.9■■■■□ 3.18
SMDT1-203ENST00000484235 TSPYL4Q9UJ04 414 aa34.9■■■■□ 3.18
SMDT1-203ENST00000484235 MYH14Q7Z406 1995 aaKnown RBP34.89■■■■□ 3.18
SMDT1-203ENST00000484235 RFC4P35249 363 aa34.89■■■■□ 3.18
SMDT1-203ENST00000484235 CHD4Q14839 1912 aa34.89■■■■□ 3.18
SMDT1-203ENST00000484235 EIF4A1P60842 406 aaKnown RBP34.88■■■■□ 3.17
SMDT1-203ENST00000484235 ZBTB1Q9Y2K1 713 aa34.88■■■■□ 3.17
SMDT1-203ENST00000484235 FAM9BQ8IZU0 186 aa34.87■■■■□ 3.17
SMDT1-203ENST00000484235 USP16Q9Y5T5 823 aa34.87■■■■□ 3.17
SMDT1-203ENST00000484235 SOS1Q07889 1333 aaPredicted RBP34.86■■■■□ 3.17
SMDT1-203ENST00000484235 MSL1Q68DK7 614 aa34.86■■■■□ 3.17
SMDT1-203ENST00000484235 CHL1O00533 1208 aa34.85■■■■□ 3.17
SMDT1-203ENST00000484235 CANXP27824 592 aaKnown RBP34.85■■■■□ 3.17
SMDT1-203ENST00000484235 DIEXFQ68CQ4 756 aaKnown RBP34.85■■■■□ 3.17
SMDT1-203ENST00000484235 PRAMEF22A3QJZ6 481 aa34.84■■■■□ 3.17
SMDT1-203ENST00000484235 GPR162Q16538 588 aa34.84■■■■□ 3.17
SMDT1-203ENST00000484235 GIGYF1O75420 1035 aaPredicted RBP34.83■■■■□ 3.17
SMDT1-203ENST00000484235 CALD1Q05682 793 aaKnown RBP34.83■■■■□ 3.17
SMDT1-203ENST00000484235 NLGN2Q8NFZ4 835 aa34.83■■■■□ 3.17
SMDT1-203ENST00000484235 A1BGP04217 495 aa34.82■■■■□ 3.16
SMDT1-203ENST00000484235 NCBP3Q53F19 620 aaKnown RBP34.82■■■■□ 3.16
SMDT1-203ENST00000484235 CCER2I3L3R5 266 aa34.81■■■■□ 3.16
SMDT1-203ENST00000484235 KLHL34Q8N239 644 aa34.81■■■■□ 3.16
SMDT1-203ENST00000484235 NLGN1Q8N2Q7 840 aa34.81■■■■□ 3.16
SMDT1-203ENST00000484235 LAS1LQ9Y4W2 734 aaKnown RBP34.81■■■■□ 3.16
SMDT1-203ENST00000484235 KDM3BQ7LBC6 1761 aa34.8■■■■□ 3.16
SMDT1-203ENST00000484235 EIF5P55010 431 aaKnown RBP34.8■■■■□ 3.16
SMDT1-203ENST00000484235 CCDC27Q2M243 656 aa34.8■■■■□ 3.16
SMDT1-203ENST00000484235 CFAP44Q96MT7 982 aa34.8■■■■□ 3.16
SMDT1-203ENST00000484235 IL6STP40189 918 aaPredicted RBP34.79■■■■□ 3.16
SMDT1-203ENST00000484235 GYS1P13807 737 aa34.78■■■■□ 3.16
SMDT1-203ENST00000484235 A0A087WZG4 1122 aa34.77■■■■□ 3.16
SMDT1-203ENST00000484235 ZPR1O75312 459 aa34.77■■■■□ 3.16
SMDT1-203ENST00000484235 USP42Q9H9J4 1324 aaKnown RBP34.77■■■■□ 3.16
SMDT1-203ENST00000484235 COL15A1P39059 1388 aa34.76■■■■□ 3.16
SMDT1-203ENST00000484235 SRP68Q9UHB9 627 aaKnown RBP34.76■■■■□ 3.16
SMDT1-203ENST00000484235 GOLGB1Q14789 3259 aaKnown RBP34.75■■■■□ 3.15
SMDT1-203ENST00000484235 ZNF853P0CG23 659 aa34.75■■■■□ 3.15
SMDT1-203ENST00000484235 IFT57Q9NWB7 429 aa34.75■■■■□ 3.15
SMDT1-203ENST00000484235 NARFQ9UHQ1 456 aa34.75■■■■□ 3.15
SMDT1-203ENST00000484235 SENP3-EIF4A1A0A087X0R7 540 aa34.74■■■■□ 3.15
SMDT1-203ENST00000484235 NPM2Q86SE8 214 aaKnown RBP34.74■■■■□ 3.15
SMDT1-203ENST00000484235 WWC1Q8IX03 1113 aa34.74■■■■□ 3.15
SMDT1-203ENST00000484235 GNAI1P63096 354 aa34.73■■■■□ 3.15
SMDT1-203ENST00000484235 USPL1Q5W0Q7 1092 aa34.71■■■■□ 3.15
SMDT1-203ENST00000484235 ZNF330Q9Y3S2 320 aaPredicted RBP34.71■■■■□ 3.15
SMDT1-203ENST00000484235 NBPF26B4DH59 902 aa34.7■■■■□ 3.15
SMDT1-203ENST00000484235 MMP10P09238 476 aa34.7■■■■□ 3.15
SMDT1-203ENST00000484235 YBX3P16989 372 aaKnown RBP eCLIP34.7■■■■□ 3.159e-8■□□□□ 8.9
SMDT1-203ENST00000484235 NBPF10Q6P3W6 841 aaKnown RBP34.7■■■■□ 3.15
SMDT1-203ENST00000484235 NBPF15Q8N660 670 aa34.7■■■■□ 3.15
SMDT1-203ENST00000484235 MBIPQ9NS73 344 aa34.7■■■■□ 3.15
SMDT1-203ENST00000484235 PIP4K2AP48426 406 aaPredicted RBP34.69■■■■□ 3.14
SMDT1-203ENST00000484235 FKBP8Q14318 412 aa34.69■■■■□ 3.14
SMDT1-203ENST00000484235 NGEFQ8N5V2 710 aa34.69■■■■□ 3.14
SMDT1-203ENST00000484235 C4AP0C0L4 1744 aa34.68■■■■□ 3.14
SMDT1-203ENST00000484235 C1QTNF8P60827 252 aa34.68■■■■□ 3.14
SMDT1-203ENST00000484235 PELP1Q8IZL8 1130 aaKnown RBP34.68■■■■□ 3.14
SMDT1-203ENST00000484235 TBC1D2BQ9UPU7 963 aa34.67■■■■□ 3.14
SMDT1-203ENST00000484235 MIER1Q8N108 512 aa34.65■■■■□ 3.14
SMDT1-203ENST00000484235 SALL2Q9Y467 1007 aaPredicted RBP34.65■■■■□ 3.14
SMDT1-203ENST00000484235 BCL2L12Q9HB09 334 aa34.64■■■■□ 3.14
SMDT1-203ENST00000484235 IL16Q14005 1332 aa34.63■■■■□ 3.13
SMDT1-203ENST00000484235 ERBB4Q15303 1308 aa34.63■■■■□ 3.13
SMDT1-203ENST00000484235 EIF2S2P20042 333 aaKnown RBP34.63■■■■□ 3.13
SMDT1-203ENST00000484235 KRT24Q2M2I5 525 aa34.63■■■■□ 3.13
SMDT1-203ENST00000484235 TM4SF1P30408 202 aa34.62■■■■□ 3.13
SMDT1-203ENST00000484235 DZIP3Q86Y13 1208 aaKnown RBP34.62■■■■□ 3.13
SMDT1-203ENST00000484235 WDR63Q8IWG1 891 aa34.62■■■■□ 3.13
SMDT1-203ENST00000484235 CD2APQ9Y5K6 639 aa34.62■■■■□ 3.13
SMDT1-203ENST00000484235 PARP3Q9Y6F1 533 aa34.62■■■■□ 3.13
SMDT1-203ENST00000484235 GRIN3BO60391 1043 aa34.61■■■■□ 3.13
SMDT1-203ENST00000484235 HOXB7P09629 217 aa34.61■■■■□ 3.13
SMDT1-203ENST00000484235 LAMB4A4D0S4 1761 aa34.59■■■■□ 3.13
SMDT1-203ENST00000484235 CAMTA2O94983 1202 aa34.59■■■■□ 3.13
SMDT1-203ENST00000484235 DUSP27Q5VZP5 1158 aa34.58■■■■□ 3.13
SMDT1-203ENST00000484235 MYL6BP14649 208 aa34.57■■■■□ 3.12
SMDT1-203ENST00000484235 NFIXQ14938 502 aa34.57■■■■□ 3.12
SMDT1-203ENST00000484235 DDR1Q08345 913 aa34.56■■■■□ 3.12
SMDT1-203ENST00000484235 PDIA6Q15084 440 aa34.56■■■■□ 3.12
SMDT1-203ENST00000484235 POLRMTO00411 1230 aaKnown RBP34.54■■■■□ 3.12
SMDT1-203ENST00000484235 RGL2O15211 777 aa34.54■■■■□ 3.12
SMDT1-203ENST00000484235 CLEC4GQ6UXB4 293 aa34.54■■■■□ 3.12
SMDT1-203ENST00000484235 NECTIN2Q92692 538 aa34.54■■■■□ 3.12
SMDT1-203ENST00000484235 HDGFL1Q5TGJ6 251 aa34.53■■■■□ 3.12
SMDT1-203ENST00000484235 TSR2Q969E8 191 aaKnown RBP34.53■■■■□ 3.12
SMDT1-203ENST00000484235 C8orf58Q8NAV2 365 aa34.52■■■■□ 3.12
SMDT1-203ENST00000484235 ZNF652Q9Y2D9 606 aa34.52■■■■□ 3.12
SMDT1-203ENST00000484235 TBC1D9BQ66K14 1250 aa34.51■■■■□ 3.12
SMDT1-203ENST00000484235 BICDL1Q6ZP65 573 aa34.5■■■■□ 3.11
SMDT1-203ENST00000484235 LRP10Q7Z4F1 713 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms