RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 PRAMEF22A3QJZ6 481 aa34.79■■■■□ 3.16
GTF3C4-202ENST00000483873 ZBTB1Q9Y2K1 713 aa34.79■■■■□ 3.16
GTF3C4-202ENST00000483873 TRAPPC3LQ5T215 181 aa34.78■■■■□ 3.16
GTF3C4-202ENST00000483873 LAMB4A4D0S4 1761 aa34.78■■■■□ 3.16
GTF3C4-202ENST00000483873 ARHGEF1Q92888 912 aaKnown RBP34.77■■■■□ 3.16
GTF3C4-202ENST00000483873 PPP1R1BQ9UD71 204 aaPredicted RBP34.77■■■■□ 3.16
GTF3C4-202ENST00000483873 STARD3NLO95772 234 aa34.75■■■■□ 3.15
GTF3C4-202ENST00000483873 TEX13AQ9BXU3 409 aaPredicted RBP34.75■■■■□ 3.15
GTF3C4-202ENST00000483873 SOS1Q07889 1333 aaPredicted RBP34.75■■■■□ 3.15
GTF3C4-202ENST00000483873 ADRA2BP18089 450 aa34.74■■■■□ 3.15
GTF3C4-202ENST00000483873 FAM9BQ8IZU0 186 aa34.74■■■■□ 3.15
GTF3C4-202ENST00000483873 TSPYL4Q9UJ04 414 aa34.74■■■■□ 3.15
GTF3C4-202ENST00000483873 USP16Q9Y5T5 823 aa34.73■■■■□ 3.15
GTF3C4-202ENST00000483873 SNRPA1P09661 255 aaKnown RBP34.72■■■■□ 3.15
GTF3C4-202ENST00000483873 EIF4A1P60842 406 aaKnown RBP34.72■■■■□ 3.15
GTF3C4-202ENST00000483873 CANXP27824 592 aaKnown RBP34.72■■■■□ 3.15
GTF3C4-202ENST00000483873 A1BGP04217 495 aa34.7■■■■□ 3.15
GTF3C4-202ENST00000483873 POLD1P28340 1107 aa34.7■■■■□ 3.15
GTF3C4-202ENST00000483873 RFC4P35249 363 aa34.7■■■■□ 3.15
GTF3C4-202ENST00000483873 COL15A1P39059 1388 aa34.7■■■■□ 3.14
GTF3C4-202ENST00000483873 ARXQ96QS3 562 aa34.69■■■■□ 3.14
GTF3C4-202ENST00000483873 LAS1LQ9Y4W2 734 aaKnown RBP34.69■■■■□ 3.14
GTF3C4-202ENST00000483873 SRP68Q9UHB9 627 aaKnown RBP34.68■■■■□ 3.14
GTF3C4-202ENST00000483873 BABAM1Q9NWV8 329 aa34.67■■■■□ 3.14
GTF3C4-202ENST00000483873 USP42Q9H9J4 1324 aaKnown RBP34.65■■■■□ 3.14
GTF3C4-202ENST00000483873 CHL1O00533 1208 aa34.65■■■■□ 3.14
GTF3C4-202ENST00000483873 GIGYF1O75420 1035 aaPredicted RBP34.65■■■■□ 3.14
GTF3C4-202ENST00000483873 PIP4K2AP48426 406 aaPredicted RBP34.65■■■■□ 3.14
GTF3C4-202ENST00000483873 GYS1P13807 737 aa34.64■■■■□ 3.14
GTF3C4-202ENST00000483873 EIF5P55010 431 aaKnown RBP34.64■■■■□ 3.14
GTF3C4-202ENST00000483873 ZNF330Q9Y3S2 320 aaPredicted RBP34.63■■■■□ 3.13
GTF3C4-202ENST00000483873 FHDC1Q9C0D6 1143 aaPredicted RBP34.62■■■■□ 3.13
GTF3C4-202ENST00000483873 IL6STP40189 918 aaPredicted RBP34.6■■■■□ 3.13
GTF3C4-202ENST00000483873 CFAP44Q96MT7 982 aa34.6■■■■□ 3.13
GTF3C4-202ENST00000483873 SCN7AQ01118 1682 aa34.6■■■■□ 3.13
GTF3C4-202ENST00000483873 CCER2I3L3R5 266 aa34.59■■■■□ 3.13
GTF3C4-202ENST00000483873 NBPF26B4DH59 902 aa34.58■■■■□ 3.13
GTF3C4-202ENST00000483873 ZNF853P0CG23 659 aa34.58■■■■□ 3.13
GTF3C4-202ENST00000483873 KRT24Q2M2I5 525 aa34.58■■■■□ 3.13
GTF3C4-202ENST00000483873 USPL1Q5W0Q7 1092 aa34.58■■■■□ 3.13
GTF3C4-202ENST00000483873 NBPF10Q6P3W6 841 aaKnown RBP34.58■■■■□ 3.13
GTF3C4-202ENST00000483873 NBPF15Q8N660 670 aa34.58■■■■□ 3.13
GTF3C4-202ENST00000483873 SALL2Q9Y467 1007 aaPredicted RBP34.58■■■■□ 3.13
GTF3C4-202ENST00000483873 ZPR1O75312 459 aa34.57■■■■□ 3.13
GTF3C4-202ENST00000483873 FKBP8Q14318 412 aa34.57■■■■□ 3.13
GTF3C4-202ENST00000483873 CCDC27Q2M243 656 aa34.57■■■■□ 3.13
GTF3C4-202ENST00000483873 NLGN1Q8N2Q7 840 aa34.57■■■■□ 3.13
GTF3C4-202ENST00000483873 NARFQ9UHQ1 456 aa34.57■■■■□ 3.13
GTF3C4-202ENST00000483873 BCORQ6W2J9 1755 aa34.57■■■■□ 3.12
GTF3C4-202ENST00000483873 MMP10P09238 476 aa34.56■■■■□ 3.12
GTF3C4-202ENST00000483873 WWC1Q8IX03 1113 aa34.56■■■■□ 3.12
GTF3C4-202ENST00000483873 KLHL34Q8N239 644 aa34.56■■■■□ 3.12
GTF3C4-202ENST00000483873 MBIPQ9NS73 344 aa34.56■■■■□ 3.12
GTF3C4-202ENST00000483873 CALD1Q05682 793 aaKnown RBP34.55■■■■□ 3.12
GTF3C4-202ENST00000483873 IFT57Q9NWB7 429 aa34.55■■■■□ 3.12
GTF3C4-202ENST00000483873 MIER1Q8N108 512 aa34.55■■■■□ 3.12
GTF3C4-202ENST00000483873 SYT17Q9BSW7 474 aa34.54■■■■□ 3.12
GTF3C4-202ENST00000483873 BCL2L12Q9HB09 334 aa34.54■■■■□ 3.12
GTF3C4-202ENST00000483873 TBC1D2BQ9UPU7 963 aa34.54■■■■□ 3.12
GTF3C4-202ENST00000483873 A0A087WZG4 1122 aa34.53■■■■□ 3.12
GTF3C4-202ENST00000483873 GNAI1P63096 354 aa34.53■■■■□ 3.12
GTF3C4-202ENST00000483873 NCBP3Q53F19 620 aaKnown RBP34.52■■■■□ 3.12
GTF3C4-202ENST00000483873 EIF2S2P20042 333 aaKnown RBP34.5■■■■□ 3.11
GTF3C4-202ENST00000483873 NPM2Q86SE8 214 aaKnown RBP34.48■■■■□ 3.11
GTF3C4-202ENST00000483873 DZIP3Q86Y13 1208 aaKnown RBP34.48■■■■□ 3.11
GTF3C4-202ENST00000483873 DDR1Q08345 913 aa34.47■■■■□ 3.11
GTF3C4-202ENST00000483873 AFDNP55196 1824 aaKnown RBP34.47■■■■□ 3.11
GTF3C4-202ENST00000483873 CAMTA2O94983 1202 aa34.47■■■■□ 3.11
GTF3C4-202ENST00000483873 NECTIN2Q92692 538 aa34.47■■■■□ 3.11
GTF3C4-202ENST00000483873 MYL6BP14649 208 aa34.46■■■■□ 3.11
GTF3C4-202ENST00000483873 NLGN2Q8NFZ4 835 aa34.46■■■■□ 3.11
GTF3C4-202ENST00000483873 KIF13BQ9NQT8 1826 aa34.46■■■■□ 3.11
GTF3C4-202ENST00000483873 TM4SF1P30408 202 aa34.45■■■■□ 3.11
GTF3C4-202ENST00000483873 NGEFQ8N5V2 710 aa34.45■■■■□ 3.11
GTF3C4-202ENST00000483873 PARP3Q9Y6F1 533 aa34.45■■■■□ 3.11
GTF3C4-202ENST00000483873 NFIXQ14938 502 aa34.44■■■■□ 3.1
GTF3C4-202ENST00000483873 TSR2Q969E8 191 aaKnown RBP34.44■■■■□ 3.1
GTF3C4-202ENST00000483873 IL16Q14005 1332 aa34.42■■■■□ 3.1
GTF3C4-202ENST00000483873 ERBB4Q15303 1308 aa34.42■■■■□ 3.1
GTF3C4-202ENST00000483873 PDIA6Q15084 440 aa34.42■■■■□ 3.1
GTF3C4-202ENST00000483873 DUSP27Q5VZP5 1158 aa34.42■■■■□ 3.1
GTF3C4-202ENST00000483873 POLRMTO00411 1230 aaKnown RBP34.41■■■■□ 3.1
GTF3C4-202ENST00000483873 ANXA1P04083 346 aa34.41■■■■□ 3.1
GTF3C4-202ENST00000483873 PROSER3Q2NL68 480 aa34.41■■■■□ 3.1
GTF3C4-202ENST00000483873 NRXN2Q9P2S2 1712 aa34.41■■■■□ 3.1
GTF3C4-202ENST00000483873 TBC1D9BQ66K14 1250 aa34.4■■■■□ 3.1
GTF3C4-202ENST00000483873 BICDL1Q6ZP65 573 aa34.4■■■■□ 3.1
GTF3C4-202ENST00000483873 CD2APQ9Y5K6 639 aa34.4■■■■□ 3.1
GTF3C4-202ENST00000483873 KIAA1551Q9HCM1 1747 aa34.4■■■■□ 3.1
GTF3C4-202ENST00000483873 C10orf71Q711Q0 1435 aa34.39■■■■□ 3.1
GTF3C4-202ENST00000483873 NUP98P52948 1817 aa34.39■■■■□ 3.1
GTF3C4-202ENST00000483873 ELL2O00472 640 aaPredicted RBP34.38■■■■□ 3.09
GTF3C4-202ENST00000483873 HOXB7P09629 217 aa34.38■■■■□ 3.09
GTF3C4-202ENST00000483873 TTLL7Q6ZT98 887 aa34.38■■■■□ 3.09
GTF3C4-202ENST00000483873 LRP10Q7Z4F1 713 aa34.38■■■■□ 3.09
GTF3C4-202ENST00000483873 WDR63Q8IWG1 891 aa34.38■■■■□ 3.09
GTF3C4-202ENST00000483873 C8orf58Q8NAV2 365 aa34.38■■■■□ 3.09
GTF3C4-202ENST00000483873 HDGFL1Q5TGJ6 251 aa34.38■■■■□ 3.09
GTF3C4-202ENST00000483873 N4BP2Q86UW6 1770 aaPredicted RBP34.37■■■■□ 3.09
GTF3C4-202ENST00000483873 SPINK5Q9NQ38 1064 aaPredicted RBP34.35■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms