RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 TRIM35Q9UPQ4 493 aa17.6■□□□□ 0.41
SSR1-208ENST00000483409 STARD3NLO95772 234 aa17.59■□□□□ 0.41
SSR1-208ENST00000483409 ARHGEF1Q92888 912 aaKnown RBP17.59■□□□□ 0.41
SSR1-208ENST00000483409 ZBTB1Q9Y2K1 713 aa17.59■□□□□ 0.41
SSR1-208ENST00000483409 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.4
SSR1-208ENST00000483409 PRAMEF22A3QJZ6 481 aa17.58■□□□□ 0.4
SSR1-208ENST00000483409 ADRA2BP18089 450 aa17.58■□□□□ 0.4
SSR1-208ENST00000483409 POLD1P28340 1107 aa17.58■□□□□ 0.4
SSR1-208ENST00000483409 SOS1Q07889 1333 aaPredicted RBP17.57■□□□□ 0.4
SSR1-208ENST00000483409 CANXP27824 592 aaKnown RBP17.57■□□□□ 0.4
SSR1-208ENST00000483409 RFC4P35249 363 aa17.57■□□□□ 0.4
SSR1-208ENST00000483409 ARXQ96QS3 562 aa17.57■□□□□ 0.4
SSR1-208ENST00000483409 TEX13AQ9BXU3 409 aaPredicted RBP17.57■□□□□ 0.4
SSR1-208ENST00000483409 TSPYL4Q9UJ04 414 aa17.57■□□□□ 0.4
SSR1-208ENST00000483409 SNRPA1P09661 255 aaKnown RBP17.56■□□□□ 0.4
SSR1-208ENST00000483409 COL15A1P39059 1388 aa17.55■□□□□ 0.4
SSR1-208ENST00000483409 SRP68Q9UHB9 627 aaKnown RBP17.55■□□□□ 0.4
SSR1-208ENST00000483409 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
SSR1-208ENST00000483409 A1BGP04217 495 aa17.54■□□□□ 0.4
SSR1-208ENST00000483409 EIF4A1P60842 406 aaKnown RBP17.54■□□□□ 0.4
SSR1-208ENST00000483409 FAM9BQ8IZU0 186 aa17.54■□□□□ 0.4
SSR1-208ENST00000483409 KLHL34Q8N239 644 aa17.54■□□□□ 0.4
SSR1-208ENST00000483409 FHDC1Q9C0D6 1143 aaPredicted RBP17.54■□□□□ 0.4
SSR1-208ENST00000483409 ZNF330Q9Y3S2 320 aaPredicted RBP17.54■□□□□ 0.4
SSR1-208ENST00000483409 LAS1LQ9Y4W2 734 aaKnown RBP17.54■□□□□ 0.4
SSR1-208ENST00000483409 PIP4K2AP48426 406 aaPredicted RBP17.53■□□□□ 0.4
SSR1-208ENST00000483409 USP42Q9H9J4 1324 aaKnown RBP17.52■□□□□ 0.4
SSR1-208ENST00000483409 GYS1P13807 737 aa17.52■□□□□ 0.4
SSR1-208ENST00000483409 SCN7AQ01118 1682 aa17.52■□□□□ 0.39
SSR1-208ENST00000483409 GIGYF1O75420 1035 aaPredicted RBP17.51■□□□□ 0.39
SSR1-208ENST00000483409 BABAM1Q9NWV8 329 aa17.51■□□□□ 0.39
SSR1-208ENST00000483409 CHL1O00533 1208 aa17.5■□□□□ 0.39
SSR1-208ENST00000483409 ZPR1O75312 459 aa17.5■□□□□ 0.39
SSR1-208ENST00000483409 MMP10P09238 476 aa17.5■□□□□ 0.39
SSR1-208ENST00000483409 EIF5P55010 431 aaKnown RBP17.5■□□□□ 0.39
SSR1-208ENST00000483409 BCORQ6W2J9 1755 aa17.5■□□□□ 0.39
SSR1-208ENST00000483409 IL6STP40189 918 aaPredicted RBP17.49■□□□□ 0.39
SSR1-208ENST00000483409 FKBP8Q14318 412 aa17.49■□□□□ 0.39
SSR1-208ENST00000483409 USPL1Q5W0Q7 1092 aa17.49■□□□□ 0.39
SSR1-208ENST00000483409 DIEXFQ68CQ4 756 aaKnown RBP17.49■□□□□ 0.39
SSR1-208ENST00000483409 NLGN1Q8N2Q7 840 aa17.49■□□□□ 0.39
SSR1-208ENST00000483409 SYT17Q9BSW7 474 aa17.49■□□□□ 0.39
SSR1-208ENST00000483409 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
SSR1-208ENST00000483409 SALL2Q9Y467 1007 aaPredicted RBP17.48■□□□□ 0.39
SSR1-208ENST00000483409 A0A087WZG4 1122 aa17.47■□□□□ 0.39
SSR1-208ENST00000483409 NBPF26B4DH59 902 aa17.47■□□□□ 0.39
SSR1-208ENST00000483409 CALD1Q05682 793 aaKnown RBP17.47■□□□□ 0.39
SSR1-208ENST00000483409 KRT24Q2M2I5 525 aa17.47■□□□□ 0.39
SSR1-208ENST00000483409 NBPF10Q6P3W6 841 aaKnown RBP17.47■□□□□ 0.39
SSR1-208ENST00000483409 NPM2Q86SE8 214 aaKnown RBP17.47■□□□□ 0.39
SSR1-208ENST00000483409 NBPF15Q8N660 670 aa17.47■□□□□ 0.39
SSR1-208ENST00000483409 CFAP44Q96MT7 982 aa17.47■□□□□ 0.39
SSR1-208ENST00000483409 TBC1D2BQ9UPU7 963 aa17.47■□□□□ 0.39
SSR1-208ENST00000483409 AFDNP55196 1824 aaKnown RBP17.47■□□□□ 0.39
SSR1-208ENST00000483409 MBIPQ9NS73 344 aa17.46■□□□□ 0.39
SSR1-208ENST00000483409 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
SSR1-208ENST00000483409 KIF13BQ9NQT8 1826 aa17.46■□□□□ 0.39
SSR1-208ENST00000483409 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
SSR1-208ENST00000483409 CCDC27Q2M243 656 aa17.45■□□□□ 0.38
SSR1-208ENST00000483409 WWC1Q8IX03 1113 aa17.45■□□□□ 0.38
SSR1-208ENST00000483409 BCL2L12Q9HB09 334 aa17.45■□□□□ 0.38
SSR1-208ENST00000483409 CCER2I3L3R5 266 aa17.44■□□□□ 0.38
SSR1-208ENST00000483409 EIF2S2P20042 333 aaKnown RBP17.44■□□□□ 0.38
SSR1-208ENST00000483409 GNAI1P63096 354 aa17.44■□□□□ 0.38
SSR1-208ENST00000483409 DZIP3Q86Y13 1208 aaKnown RBP17.44■□□□□ 0.38
SSR1-208ENST00000483409 NLGN2Q8NFZ4 835 aa17.44■□□□□ 0.38
SSR1-208ENST00000483409 PARP3Q9Y6F1 533 aa17.44■□□□□ 0.38
SSR1-208ENST00000483409 DDR1Q08345 913 aa17.43■□□□□ 0.38
SSR1-208ENST00000483409 NGEFQ8N5V2 710 aa17.43■□□□□ 0.38
SSR1-208ENST00000483409 NECTIN2Q92692 538 aa17.43■□□□□ 0.38
SSR1-208ENST00000483409 N4BP2Q86UW6 1770 aaPredicted RBP17.43■□□□□ 0.38
SSR1-208ENST00000483409 NUP98P52948 1817 aa17.42■□□□□ 0.38
SSR1-208ENST00000483409 CAMTA2O94983 1202 aa17.42■□□□□ 0.38
SSR1-208ENST00000483409 MYL6BP14649 208 aa17.42■□□□□ 0.38
SSR1-208ENST00000483409 NFIXQ14938 502 aa17.42■□□□□ 0.38
SSR1-208ENST00000483409 CD2APQ9Y5K6 639 aa17.42■□□□□ 0.38
SSR1-208ENST00000483409 TM4SF1P30408 202 aa17.41■□□□□ 0.38
SSR1-208ENST00000483409 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
SSR1-208ENST00000483409 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
SSR1-208ENST00000483409 MIER1Q8N108 512 aa17.41■□□□□ 0.38
SSR1-208ENST00000483409 KIAA1551Q9HCM1 1747 aa17.41■□□□□ 0.38
SSR1-208ENST00000483409 NRXN2Q9P2S2 1712 aa17.41■□□□□ 0.38
SSR1-208ENST00000483409 C10orf71Q711Q0 1435 aa17.4■□□□□ 0.38
SSR1-208ENST00000483409 POLRMTO00411 1230 aaKnown RBP17.4■□□□□ 0.38
SSR1-208ENST00000483409 ANXA1P04083 346 aa17.4■□□□□ 0.38
SSR1-208ENST00000483409 DUSP27Q5VZP5 1158 aa17.4■□□□□ 0.38
SSR1-208ENST00000483409 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
SSR1-208ENST00000483409 TSR2Q969E8 191 aaKnown RBP17.4■□□□□ 0.38
SSR1-208ENST00000483409 ERBB4Q15303 1308 aa17.4■□□□□ 0.38
SSR1-208ENST00000483409 PROSER3Q2NL68 480 aa17.39■□□□□ 0.37
SSR1-208ENST00000483409 ELL2O00472 640 aaPredicted RBP17.38■□□□□ 0.37
SSR1-208ENST00000483409 PDIA6Q15084 440 aa17.38■□□□□ 0.37
SSR1-208ENST00000483409 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
SSR1-208ENST00000483409 TTLL7Q6ZT98 887 aa17.38■□□□□ 0.37
SSR1-208ENST00000483409 IL16Q14005 1332 aa17.38■□□□□ 0.37
SSR1-208ENST00000483409 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
SSR1-208ENST00000483409 HOXB7P09629 217 aa17.37■□□□□ 0.37
SSR1-208ENST00000483409 KIF6Q6ZMV9 814 aa17.37■□□□□ 0.37
SSR1-208ENST00000483409 PELP1Q8IZL8 1130 aaKnown RBP17.37■□□□□ 0.37
SSR1-208ENST00000483409 C8orf58Q8NAV2 365 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms